vtkNIFTIImagePrivate.h

Go to the documentation of this file.

#ifndef vtkNIFTIImagePrivate_h
#define vtkNIFTIImagePrivate_h
 
/*****************************************************************************
 ** This file defines the "NIFTI-1" header format.               **
 ** It is derived from 2 meetings at the NIH (31 Mar 2003 and    **
 ** 02 Sep 2003) of the Data Format Working Group (DFWG),        **
 ** chartered by the NIfTI (Neuroimaging Informatics Technology  **
 ** Initiative) at the National Institutes of Health (NIH).      **
 **--------------------------------------------------------------**
 ** Neither the National Institutes of Health (NIH), the DFWG,   **
 ** nor any of the members or employees of these institutions    **
 ** imply any warranty of usefulness of this material for any    **
 ** purpose, and do not assume any liability for damages,        **
 ** incidental or otherwise, caused by any use of this document. **
 ** If these conditions are not acceptable, do not use this!     **
 **--------------------------------------------------------------**
 ** Author:   Robert W Cox (NIMH, Bethesda)                      **
 ** Advisors: John Ashburner (FIL, London),                      **
 **           Stephen Smith (FMRIB, Oxford),                     **
 **           Mark Jenkinson (FMRIB, Oxford)                     **
 ******************************************************************************/
 
/*=================*/
#ifdef __cplusplus
extern "C"
{
#endif
  /*=================*/
 
  /*************************/ /************/
  struct nifti_1_header
  { /* NIFTI-1 usage         */ /*  offset  */
    /*************************/ /************/
 
    int sizeof_hdr;              /*   0 */
    char data_type[10];          /*   4 */
    char db_name[18];            /*  14 */
    int extents;                 /*  32 */
    short session_error;         /*  36 */
    char regular;                /*  38 */
    char dim_info;               /*  39 */
    short dim[8];                /*  40 */
    float intent_p1;             /*  56 */
    float intent_p2;             /*  60 */
    float intent_p3;             /*  64 */
    short intent_code;           /*  68 */
    short datatype;              /*  70 */
    short bitpix;                /*  72 */
    short slice_start;           /*  74 */
    float pixdim[8];             /*  76 */
    float vox_offset;            /* 108 */
    float scl_slope;             /* 112 */
    float scl_inter;             /* 116 */
    short slice_end;             /* 120 */
    char slice_code;             /* 122 */
    char xyzt_units;             /* 123 */
    float cal_max;               /* 124 */
    float cal_min;               /* 128 */
    float slice_duration;        /* 132 */
    float toffset;               /* 136 */
    int glmax;                   /* 140 */
    int glmin;                   /* 144 */
    char descrip[80];            /* 148 */
    char aux_file[24];           /* 228 */
    short qform_code;            /* 252 */
    short sform_code;            /* 254 */
    float quatern_b;             /* 256 */
    float quatern_c;             /* 260 */
    float quatern_d;             /* 264 */
    float qoffset_x;             /* 268 */
    float qoffset_y;             /* 272 */
    float qoffset_z;             /* 276 */
    float srow_x[4];       /* 280 */
    float srow_y[4];       /* 296 */
    float srow_z[4];       /* 312 */
    char intent_name[16];  /* 328 */
    char magic[4];         /* 344 */
 
  }; /**** 348 bytes total ****/
 
  typedef struct nifti_1_header nifti_1_header;
 
  /*---------------------------------------------------------------------------*/
  /* TYPE OF DATA (acceptable values for datatype field):
     ---------------------------------------------------
     Values of datatype smaller than 256 are ANALYZE 7.5 compatible.
     Larger values are NIFTI-1 additions.  These are all multiples of 256, so
     that no bits below position 8 are set in datatype.  But there is no need
     to use only powers-of-2, as the original ANALYZE 7.5 datatype codes do.
 
     The additional codes are intended to include a complete list of basic
     scalar types, including signed and unsigned integers from 8 to 64 bits,
     floats from 32 to 128 bits, and complex (float pairs) from 64 to 256 bits.
 
     Note that most programs will support only a few of these datatypes!
     A NIFTI-1 program should fail gracefully (e.g., print a warning message)
     when it encounters a dataset with a type it doesn't like.
  -----------------------------------------------------------------------------*/
 
 
#define NIFTI_TYPE_UINT8 2
#define NIFTI_TYPE_INT16 4
#define NIFTI_TYPE_INT32 8
#define NIFTI_TYPE_FLOAT32 16
#define NIFTI_TYPE_COMPLEX64 32
#define NIFTI_TYPE_FLOAT64 64
#define NIFTI_TYPE_RGB24 128
#define NIFTI_TYPE_INT8 256
#define NIFTI_TYPE_UINT16 512
#define NIFTI_TYPE_UINT32 768
#define NIFTI_TYPE_INT64 1024
#define NIFTI_TYPE_UINT64 1280
#define NIFTI_TYPE_FLOAT128 1536
#define NIFTI_TYPE_COMPLEX128 1792
#define NIFTI_TYPE_COMPLEX256 2048
#define NIFTI_TYPE_RGBA32 2304
 
  /*---------------------------------------------------------------------------*/
  /* MISCELLANEOUS C MACROS
  -----------------------------------------------------------------------------*/
 
  /*.................*/
#define NIFTI_VERSION(h)                                                                           \
  (((h).magic[0] == 'n' && (h).magic[3] == '\0' && ((h).magic[1] == 'i' || (h).magic[1] == '+') && \
     ((h).magic[2] >= '1' && (h).magic[2] <= '9'))                                                 \
      ? (h).magic[2] - '0'                                                                         \
      : 0)
 
  /*.................*/
#define NIFTI_ONEFILE(h) ((h).magic[1] == '+')
 
  /*.................*/
#define NIFTI_NEEDS_SWAP(h) ((h).dim[0] < 0 || (h).dim[0] > 7)
 
/*=================*/
#ifdef __cplusplus
}
#endif
/*=================*/
 
/*---------------------------------------------------------------------------*/
/* Changes to the header from NIFTI-1 to NIFTI-2 are intended to allow for
   larger and more accurate fields.  The changes are as follows:
 
      - short dim[8]         -> int64_t dim[8]
      - float intent_p1,2,3  -> double intent_p1,2,3    (3 fields)
      - float pixdim[8]      -> double pixdim[8]
      - float vox_offset     -> int64_t vox_offset
      - float scl_slope      -> double scl_slope
      - float scl_inter      -> double scl_inter
      - float cal_max        -> double cal_max
      - float cal_min        -> double cal_min
      - float slice_duration -> double slice_duration
      - float toffset        -> double toffset
      - short slice_start    -> int64_t slice_start
      - short slice_end      -> int64_t slice_end
      - char slice_code      -> int32_t slice_code
      - char xyzt_units      -> int32_t xyzt_units
      - short intent_code    -> int32_t intent_code
      - short qform_code     -> int32_t qform_code
      - short sform_code     -> int32_t sform_code
      - float quatern_b,c,d  -> double quatern_b,c,d    (3 fields)
      - float srow_x,y,z[4]  -> double srow_x,y,z[4]    (3 fields)
      - char magic[4]        -> char magic[8]
      - char unused_str[15]  -> padding added at the end of the header
 
      - previously unused fields have been removed:
           data_type, db_name, extents, session_error, regular, glmax, glmin
 
      - the field ordering has been changed
-----------------------------------------------------------------------------*/
 
/*=================*/
#ifdef __cplusplus
extern "C"
{
#endif
  /*=================*/
 
  /*************************/ /************/
  struct nifti_2_header
  { /* NIFTI-2 usage         */                              /*  offset  */
    /*************************/                              /************/
    int sizeof_hdr;             /*   0 */
    char magic[8];           /*   4 */
    short datatype;             /*  12 */
    short bitpix;               /*  14 */
    long long dim[8];           /*  16 */
    double intent_p1;           /*  80 */
    double intent_p2;           /*  88 */
    double intent_p3;           /*  96 */
    double pixdim[8];           /* 104 */
    long long vox_offset;       /* 168 */
    double scl_slope;           /* 176 */
    double scl_inter;           /* 184 */
    double cal_max;             /* 192 */
    double cal_min;             /* 200 */
    double slice_duration;      /* 208 */
    double toffset;             /* 216 */
    long long slice_start;      /* 224 */
    long long slice_end;        /* 232 */
    char descrip[80];           /* 240 */
    char aux_file[24];          /* 320 */
    int qform_code;             /* 344 */
    int sform_code;             /* 348 */
    double quatern_b;           /* 352 */
    double quatern_c;           /* 360 */
    double quatern_d;           /* 368 */
    double qoffset_x;           /* 376 */
    double qoffset_y;           /* 384 */
    double qoffset_z;           /* 392 */
    double srow_x[4];       /* 400 */
    double srow_y[4];       /* 432 */
    double srow_z[4];       /* 464 */
    int slice_code;             /* 496 */
    int xyzt_units;             /* 500 */
    int intent_code;            /* 504 */
    char intent_name[16];  /* 508 */
    char dim_info;              /* 524 */
    char unused_str[15];       /* 525 */
  };                                                         /**** 540 bytes total ****/
 
  typedef struct nifti_2_header nifti_2_header;
 
/*=================*/
#ifdef __cplusplus
}
#endif
/*=================*/
 
#endif /* vtkNIFTIImagePrivate_h */
// VTK-HeaderTest-Exclude: vtkNIFTIImagePrivate.h