load_aligned_seqs¶
- load_aligned_seqs(filename: Union[str, Path], format=None, array_align=True, moltype=None, label_to_name=None, parser_kw=None, info=None, **kw)¶
loads aligned sequences from file
- Parameters:
filename (str) – path to sequence file
format (str) – sequence file format, if not specified tries to guess from the path suffix
moltype – the moltype, eg DNA, PROTEIN, ‘dna’, ‘protein’
array_align (bool) – if True, returns ArrayAlignment, otherwise an annotatable Alignment
label_to_name – function for converting original name into another name.
parser_kw (dict) – optional arguments for the parser
- Return type:
ArrayAlignmentorAlignmentinstance