Class SimpleRegression
- java.lang.Object
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- org.apache.commons.math.stat.regression.SimpleRegression
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- All Implemented Interfaces:
java.io.Serializable
public class SimpleRegression extends java.lang.Object implements java.io.Serializable
Estimates an ordinary least squares regression model with one independent variable.y = intercept + slope * x
Standard errors for
intercept
andslope
are available as well as ANOVA, r-square and Pearson's r statistics.Observations (x,y pairs) can be added to the model one at a time or they can be provided in a 2-dimensional array. The observations are not stored in memory, so there is no limit to the number of observations that can be added to the model.
Usage Notes:
- When there are fewer than two observations in the model, or when
there is no variation in the x values (i.e. all x values are the same)
all statistics return
NaN
. At least two observations with different x coordinates are requred to estimate a bivariate regression model. - getters for the statistics always compute values based on the current set of observations -- i.e., you can get statistics, then add more data and get updated statistics without using a new instance. There is no "compute" method that updates all statistics. Each of the getters performs the necessary computations to return the requested statistic.
- Version:
- $Revision: 1042336 $ $Date: 2010-12-05 13:40:48 +0100 (dim. 05 déc. 2010) $
- See Also:
- Serialized Form
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Constructor Summary
Constructors Constructor Description SimpleRegression()
Create an empty SimpleRegression instanceSimpleRegression(int degrees)
Create an empty SimpleRegression.SimpleRegression(TDistribution t)
Deprecated.in 2.2 (to be removed in 3.0).
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Method Summary
All Methods Instance Methods Concrete Methods Deprecated Methods Modifier and Type Method Description void
addData(double[][] data)
Adds the observations represented by the elements indata
.void
addData(double x, double y)
Adds the observation (x,y) to the regression data set.void
clear()
Clears all data from the model.double
getIntercept()
Returns the intercept of the estimated regression line.double
getInterceptStdErr()
Returns the standard error of the intercept estimate, usually denoted s(b0).double
getMeanSquareError()
Returns the sum of squared errors divided by the degrees of freedom, usually abbreviated MSE.long
getN()
Returns the number of observations that have been added to the model.double
getR()
Returns Pearson's product moment correlation coefficient, usually denoted r.double
getRegressionSumSquares()
Returns the sum of squared deviations of the predicted y values about their mean (which equals the mean of y).double
getRSquare()
Returns the coefficient of determination, usually denoted r-square.double
getSignificance()
Returns the significance level of the slope (equiv) correlation.double
getSlope()
Returns the slope of the estimated regression line.double
getSlopeConfidenceInterval()
Returns the half-width of a 95% confidence interval for the slope estimate.double
getSlopeConfidenceInterval(double alpha)
Returns the half-width of a (100-100*alpha)% confidence interval for the slope estimate.double
getSlopeStdErr()
Returns the standard error of the slope estimate, usually denoted s(b1).double
getSumOfCrossProducts()
Returns the sum of crossproducts, xi*yi.double
getSumSquaredErrors()
Returns the sum of squared errors (SSE) associated with the regression model.double
getTotalSumSquares()
Returns the sum of squared deviations of the y values about their mean.double
getXSumSquares()
Returns the sum of squared deviations of the x values about their mean.double
predict(double x)
Returns the "predicted"y
value associated with the suppliedx
value, based on the data that has been added to the model when this method is activated.void
removeData(double[][] data)
Removes observations represented by the elements indata
.void
removeData(double x, double y)
Removes the observation (x,y) from the regression data set.void
setDistribution(TDistribution value)
Deprecated.in 2.2 (to be removed in 3.0).
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Constructor Detail
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SimpleRegression
public SimpleRegression()
Create an empty SimpleRegression instance
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SimpleRegression
@Deprecated public SimpleRegression(TDistribution t)
Deprecated.in 2.2 (to be removed in 3.0). Please use theother constructor
instead.Create an empty SimpleRegression using the given distribution object to compute inference statistics.- Parameters:
t
- the distribution used to compute inference statistics.- Since:
- 1.2
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SimpleRegression
public SimpleRegression(int degrees)
Create an empty SimpleRegression.- Parameters:
degrees
- Number of degrees of freedom of the distribution used to compute inference statistics.- Since:
- 2.2
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Method Detail
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addData
public void addData(double x, double y)
Adds the observation (x,y) to the regression data set.Uses updating formulas for means and sums of squares defined in "Algorithms for Computing the Sample Variance: Analysis and Recommendations", Chan, T.F., Golub, G.H., and LeVeque, R.J. 1983, American Statistician, vol. 37, pp. 242-247, referenced in Weisberg, S. "Applied Linear Regression". 2nd Ed. 1985.
- Parameters:
x
- independent variable valuey
- dependent variable value
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removeData
public void removeData(double x, double y)
Removes the observation (x,y) from the regression data set.Mirrors the addData method. This method permits the use of SimpleRegression instances in streaming mode where the regression is applied to a sliding "window" of observations, however the caller is responsible for maintaining the set of observations in the window.
The method has no effect if there are no points of data (i.e. n=0)- Parameters:
x
- independent variable valuey
- dependent variable value
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addData
public void addData(double[][] data)
Adds the observations represented by the elements indata
.(data[0][0],data[0][1])
will be the first observation, then(data[1][0],data[1][1])
, etc.This method does not replace data that has already been added. The observations represented by
data
are added to the existing dataset.To replace all data, use
clear()
before adding the new data.- Parameters:
data
- array of observations to be added
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removeData
public void removeData(double[][] data)
Removes observations represented by the elements indata
.If the array is larger than the current n, only the first n elements are processed. This method permits the use of SimpleRegression instances in streaming mode where the regression is applied to a sliding "window" of observations, however the caller is responsible for maintaining the set of observations in the window.
To remove all data, use
clear()
.- Parameters:
data
- array of observations to be removed
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clear
public void clear()
Clears all data from the model.
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getN
public long getN()
Returns the number of observations that have been added to the model.- Returns:
- n number of observations that have been added.
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predict
public double predict(double x)
Returns the "predicted"y
value associated with the suppliedx
value, based on the data that has been added to the model when this method is activated.predict(x) = intercept + slope * x
Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double,NaN
is returned.
- Parameters:
x
- inputx
value- Returns:
- predicted
y
value
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getIntercept
public double getIntercept()
Returns the intercept of the estimated regression line.The least squares estimate of the intercept is computed using the normal equations. The intercept is sometimes denoted b0.
Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double,NaN
is returned.
- Returns:
- the intercept of the regression line
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getSlope
public double getSlope()
Returns the slope of the estimated regression line.The least squares estimate of the slope is computed using the normal equations. The slope is sometimes denoted b1.
Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double.NaN
is returned.
- Returns:
- the slope of the regression line
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getSumSquaredErrors
public double getSumSquaredErrors()
Returns the sum of squared errors (SSE) associated with the regression model.The sum is computed using the computational formula
SSE = SYY - (SXY * SXY / SXX)
where
SYY
is the sum of the squared deviations of the y values about their mean,SXX
is similarly defined andSXY
is the sum of the products of x and y mean deviations.The sums are accumulated using the updating algorithm referenced in
addData(double, double)
.The return value is constrained to be non-negative - i.e., if due to rounding errors the computational formula returns a negative result, 0 is returned.
Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double,NaN
is returned.
- Returns:
- sum of squared errors associated with the regression model
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getTotalSumSquares
public double getTotalSumSquares()
Returns the sum of squared deviations of the y values about their mean.This is defined as SSTO here.
If
n < 2
, this returnsDouble.NaN
.- Returns:
- sum of squared deviations of y values
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getXSumSquares
public double getXSumSquares()
Returns the sum of squared deviations of the x values about their mean. Ifn < 2
, this returnsDouble.NaN
.- Returns:
- sum of squared deviations of x values
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getSumOfCrossProducts
public double getSumOfCrossProducts()
Returns the sum of crossproducts, xi*yi.- Returns:
- sum of cross products
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getRegressionSumSquares
public double getRegressionSumSquares()
Returns the sum of squared deviations of the predicted y values about their mean (which equals the mean of y).This is usually abbreviated SSR or SSM. It is defined as SSM here
Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double.NaN
is returned.
- Returns:
- sum of squared deviations of predicted y values
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getMeanSquareError
public double getMeanSquareError()
Returns the sum of squared errors divided by the degrees of freedom, usually abbreviated MSE.If there are fewer than three data pairs in the model, or if there is no variation in
x
, this returnsDouble.NaN
.- Returns:
- sum of squared deviations of y values
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getR
public double getR()
Returns Pearson's product moment correlation coefficient, usually denoted r.Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double,NaN
is returned.
- Returns:
- Pearson's r
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getRSquare
public double getRSquare()
Returns the coefficient of determination, usually denoted r-square.Preconditions:
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
Double,NaN
is returned.
- Returns:
- r-square
- At least two observations (with at least two different x values)
must have been added before invoking this method. If this method is
invoked before a model can be estimated,
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getInterceptStdErr
public double getInterceptStdErr()
Returns the standard error of the intercept estimate, usually denoted s(b0).If there are fewer that three observations in the model, or if there is no variation in x, this returns
Double.NaN
.- Returns:
- standard error associated with intercept estimate
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getSlopeStdErr
public double getSlopeStdErr()
Returns the standard error of the slope estimate, usually denoted s(b1).If there are fewer that three data pairs in the model, or if there is no variation in x, this returns
Double.NaN
.- Returns:
- standard error associated with slope estimate
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getSlopeConfidenceInterval
public double getSlopeConfidenceInterval() throws MathException
Returns the half-width of a 95% confidence interval for the slope estimate.The 95% confidence interval is
(getSlope() - getSlopeConfidenceInterval(), getSlope() + getSlopeConfidenceInterval())
If there are fewer that three observations in the model, or if there is no variation in x, this returns
Double.NaN
.Usage Note:
The validity of this statistic depends on the assumption that the observations included in the model are drawn from a Bivariate Normal Distribution.- Returns:
- half-width of 95% confidence interval for the slope estimate
- Throws:
MathException
- if the confidence interval can not be computed.
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getSlopeConfidenceInterval
public double getSlopeConfidenceInterval(double alpha) throws MathException
Returns the half-width of a (100-100*alpha)% confidence interval for the slope estimate.The (100-100*alpha)% confidence interval is
(getSlope() - getSlopeConfidenceInterval(), getSlope() + getSlopeConfidenceInterval())
To request, for example, a 99% confidence interval, use
alpha = .01
Usage Note:
The validity of this statistic depends on the assumption that the observations included in the model are drawn from a Bivariate Normal Distribution.Preconditions:
- If there are fewer that three observations in the
model, or if there is no variation in x, this returns
Double.NaN
. (0 < alpha < 1)
; otherwise anIllegalArgumentException
is thrown.
- Parameters:
alpha
- the desired significance level- Returns:
- half-width of 95% confidence interval for the slope estimate
- Throws:
MathException
- if the confidence interval can not be computed.
- If there are fewer that three observations in the
model, or if there is no variation in x, this returns
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getSignificance
public double getSignificance() throws MathException
Returns the significance level of the slope (equiv) correlation.Specifically, the returned value is the smallest
alpha
such that the slope confidence interval with significance level equal toalpha
does not include0
. On regression output, this is often denotedProb(|t| > 0)
Usage Note:
The validity of this statistic depends on the assumption that the observations included in the model are drawn from a Bivariate Normal Distribution.If there are fewer that three observations in the model, or if there is no variation in x, this returns
Double.NaN
.- Returns:
- significance level for slope/correlation
- Throws:
MathException
- if the significance level can not be computed.
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setDistribution
@Deprecated public void setDistribution(TDistribution value)
Deprecated.in 2.2 (to be removed in 3.0).Modify the distribution used to compute inference statistics.- Parameters:
value
- the new distribution- Since:
- 1.2
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