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Package org.forester.surfacing
package
org.forester.surfacing
All Classes and Interfaces
Interfaces
Classes
Enum Classes
Class
Description
AdjactantDirectedBinaryDomainCombination
AdjactantDirectedCombinableDomains
BasicBinaryDomainCombination
BasicCombinableDomains
BasicDomainSimilarityCalculator
BasicGenomeWideCombinableDomains
CombinableDomains
CombinationsBasedPairwiseDomainSimilarity
CombinationsBasedPairwiseDomainSimilarityCalculator
CountsBasedPairwiseDomainSimilarity
DirectedBinaryDomainCombination
DirectedCombinableDomains
DomainArchitectureBasedGenomeSimilarityCalculator
DomainCountsBasedPairwiseSimilarityCalculator
DomainCountsDifferenceUtil
DomainCountsDifferenceUtil.COPY_CALCULATION_MODE
DomainLengths
DomainLengthsTable
DomainParsimonyCalculator
DomainSimilarity
DomainSimilarity.DomainSimilarityScoring
DomainSimilarity.DomainSimilaritySortField
DomainSimilarity.PRINT_OPTION
DomainSimilarityCalculator
DomainSimilarityCalculator.Detailedness
DomainSimilarityCalculator.GoAnnotationOutput
GenomeWideCombinableDomains
GenomeWideCombinableDomains.GenomeWideCombinableDomainsSortOrder
MappingResults
PairwiseDomainSimilarity
PairwiseDomainSimilarityCalculator
PairwiseGenomeComparator
ProteinCountsBasedPairwiseDomainSimilarityCalculator
SimpleDomain
SurfacingConstants
SurfacingUtil
TestSurfacing