GSDII

All Known Implementing Classes:: GSDI, GSDIR

public interface GSDII

Method Summary

Modifier and Type

Method

Description

Set<PhylogenyNode>

getMappedExternalSpeciesTreeNodes()

SortedSet<String>

getReMappedScientificNamesFromGeneTree()

int

getSpeciationsSum()

List<PhylogenyNode>

getStrippedExternalGeneTreeNodes()

List<PhylogenyNode>

getStrippedSpeciesTreeNodes()

SDIutil.TaxonomyComparisonBase

getTaxCompBase()

Method Details
- getMappedExternalSpeciesTreeNodes
  
  Set<PhylogenyNode> getMappedExternalSpeciesTreeNodes()
- getReMappedScientificNamesFromGeneTree
  
  SortedSet<String> getReMappedScientificNamesFromGeneTree()
- getSpeciationsSum
  
  int getSpeciationsSum()
- getStrippedExternalGeneTreeNodes
  
  List<PhylogenyNode> getStrippedExternalGeneTreeNodes()
- getStrippedSpeciesTreeNodes
  
  List<PhylogenyNode> getStrippedSpeciesTreeNodes()
- getTaxCompBase
  
  SDIutil.TaxonomyComparisonBase getTaxCompBase()