ParserBasedPhylogenyFactory

java.lang.Object

org.forester.phylogeny.factories.ParserBasedPhylogenyFactory

All Implemented Interfaces:: PhylogenyFactory

public class ParserBasedPhylogenyFactory extends Object implements PhylogenyFactory

Method Summary

Modifier and Type

Method

Description

Object

clone()

Phylogeny[]

create(Object source, Object parser)

This must create a Phylogeny from source (e.g.

Phylogeny[]

create(Object source, Object parser, String schema_location)

static PhylogenyFactory

getInstance()

Methods inherited from class java.lang.Object
equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Details
- clone
  
  public Object clone() throws CloneNotSupportedException
  
  Overrides:
  
  clone in class Object
  
  Throws:
  
  CloneNotSupportedException
- create
  
  public Phylogeny[] create(Object source, Object parser) throws IOException
  
  Description copied from interface: PhylogenyFactory
  
  This must create a Phylogeny from source (e.g. an XML file, an alignment, pairwise distances) by using creator (e.g. an XML file parser, an algorithm implementation).
  
  Specified by:
  
  create in interface PhylogenyFactory
  
  Parameters:
  
  source - a source to create a Phylogeny from
  
  parser - a means to create a Phylogeny
  
  Returns:
  
  a Phylogeny[] based on argument source
  
  Throws:
  
  IOException
- create
  
  public Phylogeny[] create(Object source, Object parser, String schema_location) throws IOException
  
  Throws:
  
  IOException
- getInstance
  
  public static PhylogenyFactory getInstance()