Class PhyloXmlUtil

Field Details

• OTHER

  public static final String OTHER

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  • Constant Field Values

• UNKNOWN

  public static final String UNKNOWN

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  • Constant Field Values

• SEQUENCE_SYMBOL_PATTERN

  public static final Pattern SEQUENCE_SYMBOL_PATTERN

• TAXOMONY_CODE_PATTERN

  public static final Pattern TAXOMONY_CODE_PATTERN

• LIT_REF_DOI_PATTERN

  public static final Pattern LIT_REF_DOI_PATTERN

• SEQUENCE_TYPES

  public static final Set<String> SEQUENCE_TYPES

• TAXONOMY_RANKS_LIST

  public static final List<String> TAXONOMY_RANKS_LIST

• TAXONOMY_RANKS_SET

  public static final Set<String> TAXONOMY_RANKS_SET

• ROUNDING_DIGITS_FOR_PHYLOXML_DOUBLE_OUTPUT

  public static final int ROUNDING_DIGITS_FOR_PHYLOXML_DOUBLE_OUTPUT

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  • Constant Field Values

• VECTOR_PROPERTY_REF

  public static final String VECTOR_PROPERTY_REF

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  • Constant Field Values

• VECTOR_PROPERTY_TYPE

  public static final String VECTOR_PROPERTY_TYPE

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  • Constant Field Values

• UNIPROT_TAX_PROVIDER

  public static final String UNIPROT_TAX_PROVIDER

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  • Constant Field Values

• SEQ_TYPE_RNA

  public static final String SEQ_TYPE_RNA

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  • Constant Field Values

• SEQ_TYPE_DNA

  public static final String SEQ_TYPE_DNA

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  • Constant Field Values

• SEQ_TYPE_PROTEIN

  public static final String SEQ_TYPE_PROTEIN

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  • Constant Field Values