org.biojava.nbio.structure.symmetry.utils.BlastClustReader

public class BlastClustReader extends Object implements Serializable

See Also:

Constructor Details
- BlastClustReader
  
  public BlastClustReader(int sequenceIdentity)
Method Details
- getPdbChainIdClusters
  
  public List<List<String>> getPdbChainIdClusters()
- getRepresentatives
  
  public Map<String,String> getRepresentatives(String pdbId)
- getRepresentativeChain
  
  public String getRepresentativeChain(String pdbId, String chainId)
- indexOf
  
  public int indexOf(String pdbId, String chainId)
- getPdbChainIdClusters
  
  public List<List<String>> getPdbChainIdClusters(String pdbId)
- getChainIdsInEntry
  
  public List<List<String>> getChainIdsInEntry(String pdbId)

Class BlastClustReader

Constructor Summary