org.biojava.nbio.structure Class Hierarchy

Class Hierarchy

java.lang.Object
- org.biojava.nbio.structure.AtomImpl (implements org.biojava.nbio.structure.Atom, org.biojava.nbio.structure.PDBRecord, java.io.Serializable)
- org.biojava.nbio.structure.AtomIterator (implements java.util.Iterator<E>)
- org.biojava.nbio.structure.AtomPositionMap
- org.biojava.nbio.structure.Author (implements java.io.Serializable)
- org.biojava.nbio.structure.BioAssemblyIdentifier (implements org.biojava.nbio.structure.StructureIdentifier)
- org.biojava.nbio.structure.BondImpl (implements org.biojava.nbio.structure.Bond, java.io.Serializable)
- org.biojava.nbio.structure.Calc
- org.biojava.nbio.structure.ChainImpl (implements org.biojava.nbio.structure.Chain, java.io.Serializable)
- org.biojava.nbio.structure.Compound (implements java.io.Serializable)
- org.biojava.nbio.structure.DBRef (implements org.biojava.nbio.structure.PDBRecord, java.io.Serializable)
- org.biojava.nbio.structure.GroupIterator (implements java.util.Iterator<E>)
- org.biojava.nbio.structure.HetatomImpl (implements org.biojava.nbio.structure.Group, java.io.Serializable)
  - org.biojava.nbio.structure.AminoAcidImpl (implements org.biojava.nbio.structure.AminoAcid, java.io.Serializable)
  - org.biojava.nbio.structure.NucleotideImpl (implements java.lang.Cloneable, org.biojava.nbio.structure.Group, java.io.Serializable)
- org.biojava.nbio.structure.Identifier
- org.biojava.nbio.structure.JournalArticle (implements java.io.Serializable)
- org.biojava.nbio.structure.Mutator
- org.biojava.nbio.structure.PassthroughIdentifier (implements org.biojava.nbio.structure.StructureIdentifier)
- org.biojava.nbio.structure.PDBCrystallographicInfo (implements java.io.Serializable)
- org.biojava.nbio.structure.PDBHeader (implements org.biojava.nbio.structure.PDBRecord, java.io.Serializable)
- org.biojava.nbio.structure.PDBStatus
- org.biojava.nbio.structure.ResidueNumber (implements java.lang.Comparable<T>, java.io.Serializable)
- org.biojava.nbio.structure.ResidueRange
  - org.biojava.nbio.structure.ResidueRangeAndLength
    - org.biojava.nbio.structure.AugmentedResidueRange
- org.biojava.nbio.structure.SeqMisMatchImpl (implements org.biojava.nbio.structure.SeqMisMatch, java.io.Serializable)
- org.biojava.nbio.structure.Site (implements java.lang.Comparable<T>, org.biojava.nbio.structure.PDBRecord, java.io.Serializable)
- org.biojava.nbio.structure.StandardAminoAcid
- org.biojava.nbio.structure.StructureImpl (implements java.io.Serializable, org.biojava.nbio.structure.Structure)
- org.biojava.nbio.structure.StructureIO
- org.biojava.nbio.structure.StructureTools
- org.biojava.nbio.structure.SubstructureIdentifier (implements java.io.Serializable, org.biojava.nbio.structure.StructureIdentifier)
- org.biojava.nbio.structure.SVDSuperimposer
- java.lang.Throwable (implements java.io.Serializable)
  - java.lang.Exception
    - org.biojava.nbio.structure.StructureException
- org.biojava.nbio.structure.URLIdentifier (implements org.biojava.nbio.structure.StructureIdentifier)

Interface Hierarchy

org.biojava.nbio.structure.AtomPositionMap.GroupMatcher
org.biojava.nbio.structure.Bond
org.biojava.nbio.structure.Chain
java.lang.Cloneable
- org.biojava.nbio.structure.Atom (also extends org.biojava.nbio.structure.PDBRecord)
- org.biojava.nbio.structure.Structure
org.biojava.nbio.structure.Group
- org.biojava.nbio.structure.AminoAcid
org.biojava.nbio.structure.PDBRecord
- org.biojava.nbio.structure.Atom (also extends java.lang.Cloneable)
org.biojava.nbio.structure.SeqMisMatch
org.biojava.nbio.structure.StructureIdentifier

Enum Class Hierarchy

java.lang.Object
- java.lang.Enum<E> (implements java.lang.Comparable<T>, java.lang.constant.Constable, java.io.Serializable)
  - org.biojava.nbio.structure.BondType
  - org.biojava.nbio.structure.Element (implements java.io.Serializable)
  - org.biojava.nbio.structure.ElementType (implements java.io.Serializable)
  - org.biojava.nbio.structure.ExperimentalTechnique
  - org.biojava.nbio.structure.GroupType
  - org.biojava.nbio.structure.HetatomImpl.PerformanceBehavior
  - org.biojava.nbio.structure.PDBStatus.Status
  - org.biojava.nbio.structure.StructureIO.StructureFiletype

Hierarchy For Package org.biojava.nbio.structure

Class Hierarchy

Interface Hierarchy

Enum Class Hierarchy