org.biojava.nbio.structure.io.util.PDBTemporaryStorageUtils.LinkRecord

Enclosing class:: PDBTemporaryStorageUtils

public static class PDBTemporaryStorageUtils.LinkRecord extends Object

Temporary data storage for LINK records. This is necessary because LINK records precede the atoms they correspond to in a PDB file, so we must store the information encoded in a LINK record until we actually know about the atoms a LINK refers to.

Author:: Ulysse Carion

Constructor Summary

Constructors

Constructor

Description

LinkRecord(String name1, String altLoc1, String resName1, String chainID1, String resSeq1, String iCode1, String name2, String altLoc2, String resName2, String chainID2, String resSeq2, String iCode2, String sym1, String sym2)
Method Summary

Modifier and Type

Method

Description

String

getAltLoc1()

String

getAltLoc2()

String

getChainID1()

String

getChainID2()

String

getiCode1()

String

getiCode2()

String

getName1()

String

getName2()

String

getResName1()

String

getResName2()

String

getResSeq1()

String

getResSeq2()

String

getSym1()

String

getSym2()

String

toString()

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details
- LinkRecord
  
  public LinkRecord(String name1, String altLoc1, String resName1, String chainID1, String resSeq1, String iCode1, String name2, String altLoc2, String resName2, String chainID2, String resSeq2, String iCode2, String sym1, String sym2)
Method Details
- getName1
  
  public String getName1()
- getAltLoc1
  
  public String getAltLoc1()
- getResName1
  
  public String getResName1()
- getChainID1
  
  public String getChainID1()
- getResSeq1
  
  public String getResSeq1()
- getiCode1
  
  public String getiCode1()
- getName2
  
  public String getName2()
- getAltLoc2
  
  public String getAltLoc2()
- getResName2
  
  public String getResName2()
- getChainID2
  
  public String getChainID2()
- getResSeq2
  
  public String getResSeq2()
- getiCode2
  
  public String getiCode2()
- getSym1
  
  public String getSym1()
- getSym2
  
  public String getSym2()
- toString
  
  public String toString()
  
  Overrides:
  
  toString in class Object

Class PDBTemporaryStorageUtils.LinkRecord

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Details

LinkRecord

Method Details

getName1

getAltLoc1

getResName1

getChainID1

getResSeq1

getiCode1

getName2

getAltLoc2

getResName2

getChainID2

getResSeq2

getiCode2

getSym1

getSym2

toString