java.lang.Object
org.biojava.nbio.structure.io.mmcif.model.Refine

public class Refine extends Object
  • Constructor Details

    • Refine

      public Refine()
  • Method Details

    • getEntry_id

      public String getEntry_id()
    • setEntry_id

      public void setEntry_id(String entry_id)
    • getLs_number_reflns_obs

      public String getLs_number_reflns_obs()
    • setLs_number_reflns_obs

      public void setLs_number_reflns_obs(String ls_number_reflns_obs)
    • getLs_number_reflns_all

      public String getLs_number_reflns_all()
    • setLs_number_reflns_all

      public void setLs_number_reflns_all(String ls_number_reflns_all)
    • getPdbx_ls_sigma_I

      public String getPdbx_ls_sigma_I()
    • setPdbx_ls_sigma_I

      public void setPdbx_ls_sigma_I(String pdbx_ls_sigma_I)
    • getPdbx_ls_sigma_F

      public String getPdbx_ls_sigma_F()
    • setPdbx_ls_sigma_F

      public void setPdbx_ls_sigma_F(String pdbx_ls_sigma_F)
    • getPdbx_data_cutoff_high_absF

      public String getPdbx_data_cutoff_high_absF()
    • setPdbx_data_cutoff_high_absF

      public void setPdbx_data_cutoff_high_absF(String pdbx_data_cutoff_high_absF)
    • getPdbx_data_cutoff_low_absF

      public String getPdbx_data_cutoff_low_absF()
    • setPdbx_data_cutoff_low_absF

      public void setPdbx_data_cutoff_low_absF(String pdbx_data_cutoff_low_absF)
    • getPdbx_data_cutoff_high_rms_absF

      public String getPdbx_data_cutoff_high_rms_absF()
    • setPdbx_data_cutoff_high_rms_absF

      public void setPdbx_data_cutoff_high_rms_absF(String pdbx_data_cutoff_high_rms_absF)
    • getLs_d_res_low

      public String getLs_d_res_low()
    • setLs_d_res_low

      public void setLs_d_res_low(String ls_d_res_low)
    • getLs_d_res_high

      public String getLs_d_res_high()
    • setLs_d_res_high

      public void setLs_d_res_high(String ls_d_res_high)
    • getLs_percent_reflns_obs

      public String getLs_percent_reflns_obs()
    • setLs_percent_reflns_obs

      public void setLs_percent_reflns_obs(String ls_percent_reflns_obs)
    • getLs_R_factor_obs

      public String getLs_R_factor_obs()
    • setLs_R_factor_obs

      public void setLs_R_factor_obs(String ls_R_factor_obs)
    • getLs_R_factor_all

      public String getLs_R_factor_all()
    • setLs_R_factor_all

      public void setLs_R_factor_all(String ls_R_factor_all)
    • getLs_R_factor_R_work

      public String getLs_R_factor_R_work()
    • setLs_R_factor_R_work

      public void setLs_R_factor_R_work(String ls_R_factor_R_work)
    • getLs_R_factor_R_free

      public String getLs_R_factor_R_free()
    • setLs_R_factor_R_free

      public void setLs_R_factor_R_free(String ls_R_factor_R_free)
    • getLs_R_factor_R_free_error

      public String getLs_R_factor_R_free_error()
    • setLs_R_factor_R_free_error

      public void setLs_R_factor_R_free_error(String ls_R_factor_R_free_error)
    • getLs_R_factor_R_free_error_details

      public String getLs_R_factor_R_free_error_details()
    • setLs_R_factor_R_free_error_details

      public void setLs_R_factor_R_free_error_details(String ls_R_factor_R_free_error_details)
    • getLs_percent_reflns_R_free

      public String getLs_percent_reflns_R_free()
    • setLs_percent_reflns_R_free

      public void setLs_percent_reflns_R_free(String ls_percent_reflns_R_free)
    • getLs_number_reflns_R_free

      public String getLs_number_reflns_R_free()
    • setLs_number_reflns_R_free

      public void setLs_number_reflns_R_free(String ls_number_reflns_R_free)
    • getLs_number_parameters

      public String getLs_number_parameters()
    • setLs_number_parameters

      public void setLs_number_parameters(String ls_number_parameters)
    • getLs_number_restraints

      public String getLs_number_restraints()
    • setLs_number_restraints

      public void setLs_number_restraints(String ls_number_restraints)
    • getOccupancy_min

      public String getOccupancy_min()
    • setOccupancy_min

      public void setOccupancy_min(String occupancy_min)
    • getOccupancy_max

      public String getOccupancy_max()
    • setOccupancy_max

      public void setOccupancy_max(String occupancy_max)
    • getB_iso_mean

      public String getB_iso_mean()
    • setB_iso_mean

      public void setB_iso_mean(String b_iso_mean)
    • getSolvent_model_details

      public String getSolvent_model_details()
    • setSolvent_model_details

      public void setSolvent_model_details(String solvent_model_details)
    • getSolvent_model_param_ksol

      public String getSolvent_model_param_ksol()
    • setSolvent_model_param_ksol

      public void setSolvent_model_param_ksol(String solvent_model_param_ksol)
    • getSolvent_model_param_bsol

      public String getSolvent_model_param_bsol()
    • setSolvent_model_param_bsol

      public void setSolvent_model_param_bsol(String solvent_model_param_bsol)
    • getPdbx_ls_cross_valid_method

      public String getPdbx_ls_cross_valid_method()
    • setPdbx_ls_cross_valid_method

      public void setPdbx_ls_cross_valid_method(String pdbx_ls_cross_valid_method)
    • getDetails

      public String getDetails()
    • setDetails

      public void setDetails(String details)
    • getPdbx_starting_model

      public String getPdbx_starting_model()
    • setPdbx_starting_model

      public void setPdbx_starting_model(String pdbx_starting_model)
    • getPdbx_method_to_determine_struct

      public String getPdbx_method_to_determine_struct()
    • setPdbx_method_to_determine_struct

      public void setPdbx_method_to_determine_struct(String pdbx_method_to_determine_struct)
    • getPdbx_isotropic_thermal_model

      public String getPdbx_isotropic_thermal_model()
    • setPdbx_isotropic_thermal_model

      public void setPdbx_isotropic_thermal_model(String pdbx_isotropic_thermal_model)
    • getPdbx_stereochemistry_target_values

      public String getPdbx_stereochemistry_target_values()
    • setPdbx_stereochemistry_target_values

      public void setPdbx_stereochemistry_target_values(String pdbx_stereochemistry_target_values)
    • getPdbx_stereochem_target_val_spec_case

      public String getPdbx_stereochem_target_val_spec_case()
    • setPdbx_stereochem_target_val_spec_case

      public void setPdbx_stereochem_target_val_spec_case(String pdbx_stereochem_target_val_spec_case)
    • getPdbx_R_Free_selection_details

      public String getPdbx_R_Free_selection_details()
    • setPdbx_R_Free_selection_details

      public void setPdbx_R_Free_selection_details(String pdbx_R_Free_selection_details)
    • getPdbx_overall_ESU_R

      public String getPdbx_overall_ESU_R()
    • setPdbx_overall_ESU_R

      public void setPdbx_overall_ESU_R(String pdbx_overall_ESU_R)
    • getPdbx_overall_ESU_R_Free

      public String getPdbx_overall_ESU_R_Free()
    • setPdbx_overall_ESU_R_Free

      public void setPdbx_overall_ESU_R_Free(String pdbx_overall_ESU_R_Free)
    • getOverall_SU_ML

      public String getOverall_SU_ML()
    • setOverall_SU_ML

      public void setOverall_SU_ML(String overall_SU_ML)
    • getOverall_SU_B

      public String getOverall_SU_B()
    • setOverall_SU_B

      public void setOverall_SU_B(String overall_SU_B)
    • getPdbx_refine_id

      public String getPdbx_refine_id()
    • setPdbx_refine_id

      public void setPdbx_refine_id(String pdbx_refine_id)
    • getLs_redundancy_reflns_obs

      public String getLs_redundancy_reflns_obs()
    • setLs_redundancy_reflns_obs

      public void setLs_redundancy_reflns_obs(String ls_redundancy_reflns_obs)
    • getPdbx_overall_phase_error

      public String getPdbx_overall_phase_error()
    • setPdbx_overall_phase_error

      public void setPdbx_overall_phase_error(String pdbx_overall_phase_error)
    • getB_iso_min

      public String getB_iso_min()
    • setB_iso_min

      public void setB_iso_min(String b_iso_min)
    • getB_iso_max

      public String getB_iso_max()
    • setB_iso_max

      public void setB_iso_max(String b_iso_max)
    • getCorrelation_coeff_Fo_to_Fc

      public String getCorrelation_coeff_Fo_to_Fc()
    • setCorrelation_coeff_Fo_to_Fc

      public void setCorrelation_coeff_Fo_to_Fc(String correlation_coeff_Fo_to_Fc)
    • getCorrelation_coeff_Fo_to_Fc_free

      public String getCorrelation_coeff_Fo_to_Fc_free()
    • setCorrelation_coeff_Fo_to_Fc_free

      public void setCorrelation_coeff_Fo_to_Fc_free(String correlation_coeff_Fo_to_Fc_free)
    • getPdbx_solvent_vdw_probe_radii

      public String getPdbx_solvent_vdw_probe_radii()
    • setPdbx_solvent_vdw_probe_radii

      public void setPdbx_solvent_vdw_probe_radii(String pdbx_solvent_vdw_probe_radii)
    • getPdbx_solvent_ion_probe_radii

      public String getPdbx_solvent_ion_probe_radii()
    • setPdbx_solvent_ion_probe_radii

      public void setPdbx_solvent_ion_probe_radii(String pdbx_solvent_ion_probe_radii)
    • getPdbx_solvent_shrinkage_radii

      public String getPdbx_solvent_shrinkage_radii()
    • setPdbx_solvent_shrinkage_radii

      public void setPdbx_solvent_shrinkage_radii(String pdbx_solvent_shrinkage_radii)
    • getOverall_SU_R_Cruickshank_DPI

      public String getOverall_SU_R_Cruickshank_DPI()
    • setOverall_SU_R_Cruickshank_DPI

      public void setOverall_SU_R_Cruickshank_DPI(String overall_SU_R_Cruickshank_DPI)
    • getOverall_SU_R_free

      public String getOverall_SU_R_free()
    • setOverall_SU_R_free

      public void setOverall_SU_R_free(String overall_SU_R_free)
    • getLs_wR_factor_R_free

      public String getLs_wR_factor_R_free()
    • setLs_wR_factor_R_free

      public void setLs_wR_factor_R_free(String ls_wR_factor_R_free)
    • getLs_wR_factor_R_work

      public String getLs_wR_factor_R_work()
    • setLs_wR_factor_R_work

      public void setLs_wR_factor_R_work(String ls_wR_factor_R_work)
    • getOverall_FOM_free_R_set

      public String getOverall_FOM_free_R_set()
    • setOverall_FOM_free_R_set

      public void setOverall_FOM_free_R_set(String overall_FOM_free_R_set)
    • getOverall_FOM_work_R_set

      public String getOverall_FOM_work_R_set()
    • setOverall_FOM_work_R_set

      public void setOverall_FOM_work_R_set(String overall_FOM_work_R_set)
    • getPdbx_diffrn_id

      public String getPdbx_diffrn_id()
    • setPdbx_diffrn_id

      public void setPdbx_diffrn_id(String pdbx_diffrn_id)
    • getPdbx_TLS_residual_ADP_flag

      public String getPdbx_TLS_residual_ADP_flag()
    • setPdbx_TLS_residual_ADP_flag

      public void setPdbx_TLS_residual_ADP_flag(String pdbx_TLS_residual_ADP_flag)
    • getPdbx_overall_SU_R_free_Cruickshank_DPI

      public String getPdbx_overall_SU_R_free_Cruickshank_DPI()
    • setPdbx_overall_SU_R_free_Cruickshank_DPI

      public void setPdbx_overall_SU_R_free_Cruickshank_DPI(String pdbx_overall_SU_R_free_Cruickshank_DPI)
    • getPdbx_overall_SU_R_Blow_DPI

      public String getPdbx_overall_SU_R_Blow_DPI()
    • setPdbx_overall_SU_R_Blow_DPI

      public void setPdbx_overall_SU_R_Blow_DPI(String pdbx_overall_SU_R_Blow_DPI)
    • getPdbx_overall_SU_R_free_Blow_DPI

      public String getPdbx_overall_SU_R_free_Blow_DPI()
    • setPdbx_overall_SU_R_free_Blow_DPI

      public void setPdbx_overall_SU_R_free_Blow_DPI(String pdbx_overall_SU_R_free_Blow_DPI)
    • getLs_matrix_type

      public String getLs_matrix_type()
    • setLs_matrix_type

      public void setLs_matrix_type(String ls_matrix_type)
    • getLs_number_reflns_R_work

      public String getLs_number_reflns_R_work()
    • setLs_number_reflns_R_work

      public void setLs_number_reflns_R_work(String ls_number_reflns_R_work)
    • getAniso_B11

      public String getAniso_B11()
    • setAniso_B11

      public void setAniso_B11(String aniso_B11)
    • getAniso_B22

      public String getAniso_B22()
    • setAniso_B22

      public void setAniso_B22(String aniso_B22)
    • getAniso_B33

      public String getAniso_B33()
    • setAniso_B33

      public void setAniso_B33(String aniso_B33)
    • getAniso_B12

      public String getAniso_B12()
    • setAniso_B12

      public void setAniso_B12(String aniso_B12)
    • getAniso_B13

      public String getAniso_B13()
    • setAniso_B13

      public void setAniso_B13(String aniso_B13)
    • getAniso_B23

      public String getAniso_B23()
    • setAniso_B23

      public void setAniso_B23(String aniso_B23)