java.lang.Object
org.biojava.nbio.structure.io.mmcif.model.AbstractBean
org.biojava.nbio.structure.io.mmcif.model.AtomSites

public class AtomSites extends AbstractBean
A class containing the _atom_sites data. Equivalent to the SCALE records in PDB files.
Author:
Jose Duarte
  • Constructor Details

    • AtomSites

      public AtomSites()
  • Method Details

    • getEntry_id

      public String getEntry_id()
    • setEntry_id

      public void setEntry_id(String entry_id)
    • getCartn_transform_axes

      public String getCartn_transform_axes()
      Returns:
      the cartn_transform_axes
    • setCartn_transform_axes

      public void setCartn_transform_axes(String cartn_transform_axes)
      Parameters:
      cartn_transform_axes - the cartn_transform_axes to set
    • getFract_transf_matrix11

      public String getFract_transf_matrix11()
      Returns:
      the fract_transf_matrix11
    • setFract_transf_matrix11

      public void setFract_transf_matrix11(String fract_transf_matrix11)
      Parameters:
      fract_transf_matrix11 - the fract_transf_matrix11 to set
    • getFract_transf_matrix12

      public String getFract_transf_matrix12()
      Returns:
      the fract_transf_matrix12
    • setFract_transf_matrix12

      public void setFract_transf_matrix12(String fract_transf_matrix12)
      Parameters:
      fract_transf_matrix12 - the fract_transf_matrix12 to set
    • getFract_transf_matrix13

      public String getFract_transf_matrix13()
      Returns:
      the fract_transf_matrix13
    • setFract_transf_matrix13

      public void setFract_transf_matrix13(String fract_transf_matrix13)
      Parameters:
      fract_transf_matrix13 - the fract_transf_matrix13 to set
    • getFract_transf_matrix21

      public String getFract_transf_matrix21()
      Returns:
      the fract_transf_matrix21
    • setFract_transf_matrix21

      public void setFract_transf_matrix21(String fract_transf_matrix21)
      Parameters:
      fract_transf_matrix21 - the fract_transf_matrix21 to set
    • getFract_transf_matrix22

      public String getFract_transf_matrix22()
      Returns:
      the fract_transf_matrix22
    • setFract_transf_matrix22

      public void setFract_transf_matrix22(String fract_transf_matrix22)
      Parameters:
      fract_transf_matrix22 - the fract_transf_matrix22 to set
    • getFract_transf_matrix23

      public String getFract_transf_matrix23()
      Returns:
      the fract_transf_matrix23
    • setFract_transf_matrix23

      public void setFract_transf_matrix23(String fract_transf_matrix23)
      Parameters:
      fract_transf_matrix23 - the fract_transf_matrix23 to set
    • getFract_transf_matrix31

      public String getFract_transf_matrix31()
      Returns:
      the fract_transf_matrix31
    • setFract_transf_matrix31

      public void setFract_transf_matrix31(String fract_transf_matrix31)
      Parameters:
      fract_transf_matrix31 - the fract_transf_matrix31 to set
    • getFract_transf_matrix32

      public String getFract_transf_matrix32()
      Returns:
      the fract_transf_matrix32
    • setFract_transf_matrix32

      public void setFract_transf_matrix32(String fract_transf_matrix32)
      Parameters:
      fract_transf_matrix32 - the fract_transf_matrix32 to set
    • getFract_transf_matrix33

      public String getFract_transf_matrix33()
      Returns:
      the fract_transf_matrix33
    • setFract_transf_matrix33

      public void setFract_transf_matrix33(String fract_transf_matrix33)
      Parameters:
      fract_transf_matrix33 - the fract_transf_matrix33 to set
    • getFract_transf_vector1

      public String getFract_transf_vector1()
      Returns:
      the fract_transf_vector1
    • setFract_transf_vector1

      public void setFract_transf_vector1(String fract_transf_vector1)
      Parameters:
      fract_transf_vector1 - the fract_transf_vector1 to set
    • getFract_transf_vector2

      public String getFract_transf_vector2()
      Returns:
      the fract_transf_vector2
    • setFract_transf_vector2

      public void setFract_transf_vector2(String fract_transf_vector2)
      Parameters:
      fract_transf_vector2 - the fract_transf_vector2 to set
    • getFract_transf_vector3

      public String getFract_transf_vector3()
      Returns:
      the fract_transf_vector3
    • setFract_transf_vector3

      public void setFract_transf_vector3(String fract_transf_vector3)
      Parameters:
      fract_transf_vector3 - the fract_transf_vector3 to set
    • getCartn_transf_matrix11

      public String getCartn_transf_matrix11()
      Returns:
      the cartn_transf_matrix11
    • setCartn_transf_matrix11

      public void setCartn_transf_matrix11(String cartn_transf_matrix11)
      Parameters:
      cartn_transf_matrix11 - the cartn_transf_matrix11 to set
    • getCartn_transf_matrix12

      public String getCartn_transf_matrix12()
      Returns:
      the cartn_transf_matrix12
    • setCartn_transf_matrix12

      public void setCartn_transf_matrix12(String cartn_transf_matrix12)
      Parameters:
      cartn_transf_matrix12 - the cartn_transf_matrix12 to set
    • getCartn_transf_matrix13

      public String getCartn_transf_matrix13()
      Returns:
      the cartn_transf_matrix13
    • setCartn_transf_matrix13

      public void setCartn_transf_matrix13(String cartn_transf_matrix13)
      Parameters:
      cartn_transf_matrix13 - the cartn_transf_matrix13 to set
    • getCartn_transf_matrix21

      public String getCartn_transf_matrix21()
      Returns:
      the cartn_transf_matrix21
    • setCartn_transf_matrix21

      public void setCartn_transf_matrix21(String cartn_transf_matrix21)
      Parameters:
      cartn_transf_matrix21 - the cartn_transf_matrix21 to set
    • getCartn_transf_matrix22

      public String getCartn_transf_matrix22()
      Returns:
      the cartn_transf_matrix22
    • setCartn_transf_matrix22

      public void setCartn_transf_matrix22(String cartn_transf_matrix22)
      Parameters:
      cartn_transf_matrix22 - the cartn_transf_matrix22 to set
    • getCartn_transf_matrix23

      public String getCartn_transf_matrix23()
      Returns:
      the cartn_transf_matrix23
    • setCartn_transf_matrix23

      public void setCartn_transf_matrix23(String cartn_transf_matrix23)
      Parameters:
      cartn_transf_matrix23 - the cartn_transf_matrix23 to set
    • getCartn_transf_matrix31

      public String getCartn_transf_matrix31()
      Returns:
      the cartn_transf_matrix31
    • setCartn_transf_matrix31

      public void setCartn_transf_matrix31(String cartn_transf_matrix31)
      Parameters:
      cartn_transf_matrix31 - the cartn_transf_matrix31 to set
    • getCartn_transf_matrix32

      public String getCartn_transf_matrix32()
      Returns:
      the cartn_transf_matrix32
    • setCartn_transf_matrix32

      public void setCartn_transf_matrix32(String cartn_transf_matrix32)
      Parameters:
      cartn_transf_matrix32 - the cartn_transf_matrix32 to set
    • getCartn_transf_matrix33

      public String getCartn_transf_matrix33()
      Returns:
      the cartn_transf_matrix33
    • setCartn_transf_matrix33

      public void setCartn_transf_matrix33(String cartn_transf_matrix33)
      Parameters:
      cartn_transf_matrix33 - the cartn_transf_matrix33 to set
    • getCartn_transf_vector1

      public String getCartn_transf_vector1()
      Returns:
      the cartn_transf_vector1
    • setCartn_transf_vector1

      public void setCartn_transf_vector1(String cartn_transf_vector1)
      Parameters:
      cartn_transf_vector1 - the cartn_transf_vector1 to set
    • getCartn_transf_vector2

      public String getCartn_transf_vector2()
      Returns:
      the cartn_transf_vector2
    • setCartn_transf_vector2

      public void setCartn_transf_vector2(String cartn_transf_vector2)
      Parameters:
      cartn_transf_vector2 - the cartn_transf_vector2 to set
    • getCartn_transf_vector3

      public String getCartn_transf_vector3()
      Returns:
      the cartn_transf_vector3
    • setCartn_transf_vector3

      public void setCartn_transf_vector3(String cartn_transf_vector3)
      Parameters:
      cartn_transf_vector3 - the cartn_transf_vector3 to set