Package org.biojava.nbio.structure.cath

Enum Class CathCategory

java.lang.Object
java.lang.Enum<CathCategory>
org.biojava.nbio.structure.cath.CathCategory
All Implemented Interfaces:
Serializable, Comparable<CathCategory>, Constable
public enum CathCategory extends Enum<CathCategory>
The categories found within CATH. The CATH node types are: 'C' (class), 'A' (architecture), 'T' (topology), 'H' (homologous superfamily), 'S' (sequence family, S35), 'O' (orthologous sequence family, S60), 'L' ("like" sequence family, S95), 'I' (identical, S100) and 'D' (domain, S100 count).
Author:
Daniel Asarnow

  • Enum Constant Details

    • Class

      public static final CathCategory Class

    • Architecture

      public static final CathCategory Architecture

    • Topolgy

      public static final CathCategory Topolgy

    • Homology

      public static final CathCategory Homology

    • SequenceFamily

      public static final CathCategory SequenceFamily

    • OrthologousSequenceFamily

      public static final CathCategory OrthologousSequenceFamily

    • LikeSequenceFamily

      public static final CathCategory LikeSequenceFamily

    • IdenticalSequenceFamily

      public static final CathCategory IdenticalSequenceFamily

    • DomainCounter

      public static final CathCategory DomainCounter

  • Method Details

    • values

      public static CathCategory[] values()
      Returns an array containing the constants of this enum class, in the order they are declared.
      Returns:
      an array containing the constants of this enum class, in the order they are declared

    • valueOf

      public static CathCategory valueOf(String name)
      Returns the enum constant of this class with the specified name. The string must match exactly an identifier used to declare an enum constant in this class. (Extraneous whitespace characters are not permitted.)
      Parameters:
      name - the name of the enum constant to be returned.
      Returns:
      the enum constant with the specified name
      Throws:
      IllegalArgumentException - if this enum class has no constant with the specified name
      NullPointerException - if the argument is null

    • fromString

      public static CathCategory fromString(String type)

    • toString

      public String toString()
      Overrides:
      toString in class Enum<CathCategory>

    • fromCathCode

      public static CathCategory fromCathCode(String code)