org.biojava.nbio.structure.align.ce.CeSideChainUserArgumentProcessor

public class CeSideChainUserArgumentProcessor extends CeUserArgumentProcessor

Nested Class Summary

Nested classes/interfaces inherited from class org.biojava.nbio.structure.align.ce.CeUserArgumentProcessor
CeUserArgumentProcessor.CeStartupParams
Field Summary

Fields inherited from class org.biojava.nbio.structure.align.ce.AbstractUserArgumentProcessor
mandatoryArgs, newline, params
Constructor Summary

Constructors

Constructor

Description

CeSideChainUserArgumentProcessor()
Method Summary

Modifier and Type

Method

Description

StructureAlignment

getAlgorithm()

String

getDbSearchLegend()

Object

getParameters()

Methods inherited from class org.biojava.nbio.structure.align.ce.CeUserArgumentProcessor
getStartupParametersInstance

Methods inherited from class org.biojava.nbio.structure.align.ce.AbstractUserArgumentProcessor
getDbSearchResult, printAboutMe, printHelp, process

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- CeSideChainUserArgumentProcessor
  
  public CeSideChainUserArgumentProcessor()
Method Details
- getAlgorithm
  
  public StructureAlignment getAlgorithm()
  
  Overrides:
  
  getAlgorithm in class CeUserArgumentProcessor
- getParameters
  
  public Object getParameters()
  
  Overrides:
  
  getParameters in class CeUserArgumentProcessor
- getDbSearchLegend
  
  public String getDbSearchLegend()
  
  Overrides:
  
  getDbSearchLegend in class CeUserArgumentProcessor

Class CeSideChainUserArgumentProcessor

Nested Class Summary