BlastXMLQuery

java.lang.Object

org.biojava.nbio.genome.query.BlastXMLQuery

public class BlastXMLQuery extends Object

Author:: Scooter Willis

Constructor Summary

Constructors

Constructor

Description

BlastXMLQuery(String blastFile)
Method Summary

Modifier and Type

Method

Description

LinkedHashMap<String,ArrayList<String>>

getHitsQueryDef(double maxEScore)

static void

main(String[] args)

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- BlastXMLQuery
  
  public BlastXMLQuery(String blastFile) throws Exception
  
  Throws:
  
  Exception
Method Details
- getHitsQueryDef
  
  public LinkedHashMap<String,ArrayList<String>> getHitsQueryDef(double maxEScore) throws Exception
  
  Throws:
  
  Exception
- main
  
  public static void main(String[] args)