GFF3Writer

java.lang.Object

org.biojava.nbio.genome.parsers.gff.GFF3Writer

public class GFF3Writer extends Object

Author:: Scooter Willis

Constructor Summary

Constructors

Constructor

Description

GFF3Writer()
Method Summary

Modifier and Type

Method

Description

static void

main(String[] args)

void

write(OutputStream outputStream, LinkedHashMap<String,ChromosomeSequence> chromosomeSequenceList)

Output gff3 format for a DNA Sequence

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- GFF3Writer
  
  public GFF3Writer()
Method Details
- write
  
  public void write(OutputStream outputStream, LinkedHashMap<String,ChromosomeSequence> chromosomeSequenceList) throws Exception
  
  Output gff3 format for a DNA Sequence
  
  Parameters:
  
  fileName -
  
  chromosomeSequence -
  
  Throws:
  
  Exception
- main
  
  public static void main(String[] args) throws Exception
  
  Throws:
  
  Exception