FeatureHelper

java.lang.Object

org.biojava.nbio.genome.parsers.gff.FeatureHelper

public class FeatureHelper extends Object

Author:: Scooter Willis

Constructor Summary

Constructors

Constructor

Description

FeatureHelper()
Method Summary

Modifier and Type

Method

Description

static LinkedHashMap<String,FeatureList>

buildFeatureAtrributeIndex(String attribute, FeatureList list)

Build a list of individual features to allow easy indexing and to avoid iterating through large genome gff3 files The index for the returned HashMap is the value of the attribute used to build the index

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details
- FeatureHelper
  
  public FeatureHelper()
Method Details
- buildFeatureAtrributeIndex
  
  public static LinkedHashMap<String,FeatureList> buildFeatureAtrributeIndex(String attribute, FeatureList list)
  
  Build a list of individual features to allow easy indexing and to avoid iterating through large genome gff3 files The index for the returned HashMap is the value of the attribute used to build the index
  
  Parameters:
  
  attribute -
  
  list -
  
  Returns: