Class AbstractCompoundSet<C extends Compound>

Method Details

• addCompound

  protected void addCompound(C compound, C lowerCasedCompound, Iterable<C> equivalents)

• addCompound

  protected void addCompound(C compound, C lowerCasedCompound, C... equivalents)

• addEquivalent

  protected void addEquivalent(C compound, C equivalent)

• addCompound

  protected void addCompound(C compound)

• getStringForCompound

  public String getStringForCompound(C compound)

  Specified by:

  getStringForCompound in interface CompoundSet<C extends Compound>

• getCompoundForString

  public C getCompoundForString(String string)

  Description copied from interface: CompoundSet

  Return null if not recognised. Throw IllegalArgumentException if string is longer than maximum allowed by CompoundSet.getStringForCompound(Compound).

  Specified by:

  getCompoundForString in interface CompoundSet<C extends Compound>

• getMaxSingleCompoundStringLength

  public int getMaxSingleCompoundStringLength()

  Description copied from interface: CompoundSet

  Returns the maximum size of a compound String this set holds

  Specified by:

  getMaxSingleCompoundStringLength in interface CompoundSet<C extends Compound>

• isCompoundStringLengthEqual

  public boolean isCompoundStringLengthEqual()

  Description copied from interface: CompoundSet

  Returns true if all String representations of Compounds are of the same length.

  Specified by:

  isCompoundStringLengthEqual in interface CompoundSet<C extends Compound>

• hasCompound

  public boolean hasCompound(C compound)

  Specified by:

  hasCompound in interface CompoundSet<C extends Compound>

• compoundsEquivalent

  public boolean compoundsEquivalent(C compoundOne, C compoundTwo)

  Specified by:

  compoundsEquivalent in interface CompoundSet<C extends Compound>

• getEquivalentCompounds

  public Set<C> getEquivalentCompounds(C compound)

  Specified by:

  getEquivalentCompounds in interface CompoundSet<C extends Compound>

• compoundsEqual

  public boolean compoundsEqual(C compoundOne, C compoundTwo)

• isValidSequence

  public boolean isValidSequence(Sequence<C> sequence)

  Specified by:

  isValidSequence in interface CompoundSet<C extends Compound>

• getAllCompounds

  public List<C> getAllCompounds()

  Specified by:

  getAllCompounds in interface CompoundSet<C extends Compound>

• isComplementable

  public boolean isComplementable()

  Specified by:

  isComplementable in interface CompoundSet<C extends Compound>

• hashCode

  public int hashCode()

  Overrides:

  hashCode in class Object

• equals

  public boolean equals(Object o)

  Overrides:

  equals in class Object