Package org.biojava.nbio.aaproperties.profeat.convertor

Class Convert2SecondaryStructure

java.lang.Object
org.biojava.nbio.aaproperties.profeat.convertor.Convertor
org.biojava.nbio.aaproperties.profeat.convertor.Convert2SecondaryStructure
public class Convert2SecondaryStructure extends Convertor

  • Constructor Details

    • Convert2SecondaryStructure

      public Convert2SecondaryStructure()

  • Method Details

    • convert

      public char convert(char c)
      Class for the conversion of protein sequence into secondary structure
      Specified by:
      convert in class Convertor
      Parameters:
      c - an amino acid character preferably of non-ambiguous characters
      Returns:
      its grouping

    • getGrouping

      public String[] getGrouping()
      Description copied from class: Convertor
      Returns the groupings of the attribute
      Specified by:
      getGrouping in class Convertor
      Returns:
      the groupings of the attribute

    • getAttribute

      public String getAttribute()
      Description copied from class: Convertor
      Return the attribute of the grouping
      Specified by:
      getAttribute in class Convertor
      Returns:
      the attribute of the grouping