elxWeightedCombinationTransform.h

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 *
 *  Copyright UMC Utrecht and contributors
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *        http://www.apache.org/licenses/LICENSE-2.0.txt
 *
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 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
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#ifndef __elxWeightedCombinationTransform_H_
#define __elxWeightedCombinationTransform_H_
 
#include "elxIncludes.h" // include first to avoid MSVS warning
#include "itkWeightedCombinationTransform.h"
#include "itkAdvancedCombinationTransform.h"
 
namespace elastix
{
 
template< class TElastix >
class WeightedCombinationTransformElastix :
  public itk::AdvancedCombinationTransform<
  typename elx::TransformBase< TElastix >::CoordRepType,
  elx::TransformBase< TElastix >::FixedImageDimension >,
  public elx::TransformBase< TElastix >
{
public:
 
  typedef WeightedCombinationTransformElastix Self;
 
  typedef itk::AdvancedCombinationTransform<
    typename elx::TransformBase< TElastix >::CoordRepType,
    elx::TransformBase< TElastix >::FixedImageDimension >   Superclass1;
 
  typedef elx::TransformBase< TElastix > Superclass2;
 
  typedef itk::WeightedCombinationTransform<
    typename elx::TransformBase< TElastix >::CoordRepType,
    elx::TransformBase< TElastix >::FixedImageDimension,
    elx::TransformBase< TElastix >::MovingImageDimension >  WeightedCombinationTransformType;
 
  typedef itk::SmartPointer< Self >       Pointer;
  typedef itk::SmartPointer< const Self > ConstPointer;
 
  itkNewMacro( Self );
 
  itkTypeMacro( WeightedCombinationTransformElastix, itk::AdvancedCombinationTransform );
 
  elxClassNameMacro( "WeightedCombinationTransform" );
 
  itkStaticConstMacro( SpaceDimension, unsigned int, Superclass2::FixedImageDimension );
 
  typedef typename Superclass1::ScalarType                ScalarType;
  typedef typename Superclass1::ParametersType            ParametersType;
  typedef typename Superclass1::NumberOfParametersType    NumberOfParametersType;
  typedef typename Superclass1::JacobianType              JacobianType;
  typedef typename Superclass1::InputVectorType           InputVectorType;
  typedef typename Superclass1::OutputVectorType          OutputVectorType;
  typedef typename Superclass1::InputCovariantVectorType  InputCovariantVectorType;
  typedef typename Superclass1::OutputCovariantVectorType OutputCovariantVectorType;
  typedef typename Superclass1::InputVnlVectorType        InputVnlVectorType;
  typedef typename Superclass1::OutputVnlVectorType       OutputVnlVectorType;
  typedef typename Superclass1::InputPointType            InputPointType;
  typedef typename Superclass1::OutputPointType           OutputPointType;
 
  typedef typename Superclass2::ElastixType                ElastixType;
  typedef typename Superclass2::ElastixPointer             ElastixPointer;
  typedef typename Superclass2::ConfigurationType          ConfigurationType;
  typedef typename Superclass2::ConfigurationPointer       ConfigurationPointer;
  typedef typename Superclass2::RegistrationType           RegistrationType;
  typedef typename Superclass2::RegistrationPointer        RegistrationPointer;
  typedef typename Superclass2::CoordRepType               CoordRepType;
  typedef typename Superclass2::FixedImageType             FixedImageType;
  typedef typename Superclass2::MovingImageType            MovingImageType;
  typedef typename Superclass2::ITKBaseType                ITKBaseType;
  typedef typename Superclass2::CombinationTransformType   CombinationTransformType;
  typedef typename Superclass2::CommandLineArgumentMapType CommandLineArgumentMapType;
  typedef typename Superclass2::CommandLineEntryType       CommandLineEntryType;
 
  typedef typename WeightedCombinationTransformType::Pointer WeightedCombinationTransformPointer;
  typedef typename
    WeightedCombinationTransformType::TransformContainerType TransformContainerType;
  typedef typename
    WeightedCombinationTransformType::TransformType SubTransformType;
  typedef typename
    WeightedCombinationTransformType::TransformPointer SubTransformPointer;
 
  typedef typename Superclass2::ScalesType ScalesType;
 
  void BeforeRegistration( void ) override;
 
  virtual void InitializeTransform( void );
 
  virtual void SetScales( void );
 
  void ReadFromFile( void ) override;
 
  void WriteToFile( const ParametersType & param ) const override;
 
  virtual void LoadSubTransforms( void );
 
protected:
 
  WeightedCombinationTransformElastix();
  ~WeightedCombinationTransformElastix() override {}
 
  WeightedCombinationTransformPointer m_WeightedCombinationTransform;
  std::vector< std::string >          m_SubTransformFileNames;
 
private:
 
  WeightedCombinationTransformElastix( const Self & );  // purposely not implemented
  void operator=( const Self & );               // purposely not implemented
 
};
 
} // end namespace elastix
 
#ifndef ITK_MANUAL_INSTANTIATION
#include "elxWeightedCombinationTransform.hxx"
#endif
 
#endif // end #ifndef __elxWeightedCombinationTransform_H_