#include <itkTransformToSpatialJacobianSource.h>

Detailed Description

template<class TOutputImage, class TTransformPrecisionType = double>
class itk::TransformToSpatialJacobianSource< TOutputImage, TTransformPrecisionType >

Generate the spatial Jacobian matrix from a coordinate transform.

This class was inspired on an the itkTransformToDeterminantOfSpatialJacobianSource class. It generates the full spatial jacobian matrix. The output image type should thus be an image with a matrix-pixeltype, e.g., the SpatialJacobianType defined in the itkAdvancedTransform class. Suggested/recommended choices are the itk::Matrix<double, ImageDimension, ImageDimension> (=SpatialJacobianType) or itk::Matrix<float, ImageDimension, ImageDimension>

Output information (spacing, size and direction) for the output image should be set. This information has the normal defaults of unit spacing, zero origin and identity direction. Optionally, the output information can be obtained from a reference image. If the reference image is provided and UseReferenceImage is On, then the spacing, origin and direction of the reference image will be used.

Since this filter produces an image which is a different size than its input, it needs to override several of the methods defined in ProcessObject in order to properly manage the pipeline execution model. In particular, this filter overrides ProcessObject::GenerateInputRequestedRegion() and ProcessObject::GenerateOutputInformation().

This filter is implemented as a multithreaded filter. It provides a ThreadedGenerateData() method for its implementation.

Author: Stefan Klein, Erasmus MC, The Netherlands.

This class was taken from the Insight Journal paper: http://hdl.handle.net/?/?

Definition at line 67 of file itkTransformToSpatialJacobianSource.h.

Inheritance diagram for itk::TransformToSpatialJacobianSource< TOutputImage, TTransformPrecisionType >:

Public Types
typedef SmartPointer< const Self >	ConstPointer

typedef OutputImageType::DirectionType	DirectionType

typedef ImageBase< itkGetStaticConstMacro(ImageDimension) >	ImageBaseType

typedef OutputImageType::IndexType	IndexType

typedef OutputImageType::PointType	OriginType

typedef OutputImageType::ConstPointer	OutputImageConstPointer

typedef OutputImageType::Pointer	OutputImagePointer

typedef OutputImageType::RegionType	OutputImageRegionType

typedef TOutputImage	OutputImageType

typedef SmartPointer< Self >	Pointer

typedef OutputImageType::PointType	PointType

typedef OutputImageType::RegionType	RegionType

typedef TransformToSpatialJacobianSource	Self

typedef RegionType::SizeType	SizeType

typedef OutputImageType::SpacingType	SpacingType

typedef TransformType::SpatialJacobianType	SpatialJacobianType

typedef ImageSource< TOutputImage >	Superclass

typedef TransformType::ConstPointer	TransformPointerType

typedef AdvancedTransform< TTransformPrecisionType, itkGetStaticConstMacro(ImageDimension), itkGetStaticConstMacro(ImageDimension) >	TransformType

Public Member Functions
void	BeforeThreadedGenerateData (void) override

void	GenerateOutputInformation (void) override

virtual const char *	GetClassName () const

ModifiedTimeType	GetMTime (void) const override

virtual const DirectionType &	GetOutputDirection ()

virtual const IndexType &	GetOutputIndex ()

virtual const OriginType &	GetOutputOrigin ()

virtual const OutputImageRegionType &	GetOutputRegion ()

virtual const SizeType &	GetOutputSize ()

virtual const SpacingType &	GetOutputSpacing ()

virtual const TransformType *	GetTransform ()

	itkStaticConstMacro (ImageDimension, unsigned int, TOutputImage::ImageDimension)

virtual void	SetOutputDirection (DirectionType _arg)

virtual void	SetOutputIndex (const IndexType &index)

virtual void	SetOutputOrigin (const double *values)

virtual void	SetOutputOrigin (OriginType _arg)

void	SetOutputParametersFromImage (const ImageBaseType *image)

virtual void	SetOutputRegion (OutputImageRegionType _arg)

virtual void	SetOutputSize (const SizeType &size)

virtual void	SetOutputSpacing (const double *values)

virtual void	SetOutputSpacing (SpacingType _arg)

virtual void	SetTransform (const TransformType *_arg)

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
void	LinearGenerateData (void)

void	NonlinearThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId)

void	PrintSelf (std::ostream &os, Indent indent) const override

void	ThreadedGenerateData (const OutputImageRegionType &outputRegionForThread, ThreadIdType threadId) override

	TransformToSpatialJacobianSource ()

	~TransformToSpatialJacobianSource () override

Private Member Functions
void	operator= (const Self &)

	TransformToSpatialJacobianSource (const Self &)

Private Attributes
DirectionType	m_OutputDirection

OriginType	m_OutputOrigin

RegionType	m_OutputRegion

SpacingType	m_OutputSpacing

TransformPointerType	m_Transform