itk::TransformPenaltyTerm< TFixedImage, TScalarType > Class Template Reference

#include <itkTransformPenaltyTerm.h>

Detailed Description

template<class TFixedImage, class TScalarType = double>
class itk::TransformPenaltyTerm< TFixedImage, TScalarType >

A cost function that calculates a penalty term on a transformation.

We decided to make it an itk::ImageToImageMetric, since possibly all the stuff in there is also needed for penalty terms.

A transformation penalty terms has some extra demands on the transform. Therefore, the transformation is required to be of itk::AdvancedTransform type.

Definition at line 45 of file itkTransformPenaltyTerm.h.

Inheritance diagram for itk::TransformPenaltyTerm< TFixedImage, TScalarType >:

Public Types
typedef Superclass::BSplineOrder1TransformPointer	BSplineOrder1TransformPointer
typedef Superclass::BSplineOrder1TransformType	BSplineOrder1TransformType
typedef Superclass::BSplineOrder2TransformPointer	BSplineOrder2TransformPointer
typedef Superclass::BSplineOrder2TransformType	BSplineOrder2TransformType
typedef Superclass::BSplineOrder3TransformPointer	BSplineOrder3TransformPointer
typedef Superclass::BSplineOrder3TransformType	BSplineOrder3TransformType
typedef Superclass::CombinationTransformType	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::InputPointType	InputPointType
typedef TransformType::InternalMatrixType	InternalMatrixType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef TransformType::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef TransformType::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TScalarType	ScalarType
typedef TransformPenaltyTerm	Self
typedef TransformType::SpatialHessianType	SpatialHessianType
typedef TransformType::SpatialJacobianType	SpatialJacobianType
typedef AdvancedImageToImageMetric< TFixedImage, TFixedImage >	Superclass
typedef Superclass::ThreaderType	ThreaderType
typedef Superclass::ThreadInfoType	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::AdvancedTransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedImageMaskSpatialObject2Type
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingImageMaskSpatialObject2Type
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< TFixedImage, TFixedImage >	Superclass
typedef itk::PlatformMultiThreader	ThreaderType
typedef ThreaderType::WorkUnitInfo	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType

Public Member Functions
virtual const char *	GetClassName () const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const char *	GetClassName () const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const override
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()

Protected Types
typedef Superclass::FixedImageIndexType	FixedImageIndexType
typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType
typedef Superclass::FixedImagePointType	FixedImagePointType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImagePointType	MovingImagePointType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType

Protected Member Functions
virtual bool	CheckForBSplineTransform2 (BSplineOrder3TransformPointer &bspline) const
	TransformPenaltyTerm ()
	~TransformPenaltyTerm () override
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void)
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
	~AdvancedImageToImageMetric () override

Private Member Functions
void	operator= (const Self &)
	TransformPenaltyTerm (const Self &)

Additional Inherited Members
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
double	m_FixedLimitRangeRatio
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
double	m_MovingLimitRangeRatio
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP

Member Typedef Documentation

BSplineOrder1TransformPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder1TransformPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder1TransformPointer

Definition at line 102 of file itkTransformPenaltyTerm.h.

BSplineOrder1TransformType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder1TransformType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder1TransformType

Definition at line 101 of file itkTransformPenaltyTerm.h.

BSplineOrder2TransformPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder2TransformPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder2TransformPointer

Definition at line 104 of file itkTransformPenaltyTerm.h.

BSplineOrder2TransformType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder2TransformType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder2TransformType

Definition at line 103 of file itkTransformPenaltyTerm.h.

BSplineOrder3TransformPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder3TransformPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder3TransformPointer

Definition at line 106 of file itkTransformPenaltyTerm.h.

BSplineOrder3TransformType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::BSplineOrder3TransformType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::BSplineOrder3TransformType

Definition at line 105 of file itkTransformPenaltyTerm.h.

CombinationTransformType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::CombinationTransformType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::CombinationTransformType

Typedef's for the B-spline transform.

Definition at line 100 of file itkTransformPenaltyTerm.h.

ConstPointer

template<class TFixedImage , class TScalarType = double>

typedef SmartPointer< const Self > itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ConstPointer

Definition at line 55 of file itkTransformPenaltyTerm.h.

CoordinateRepresentationType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::CoordinateRepresentationType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::CoordinateRepresentationType

Typedef's inherited from the superclass.

Definition at line 61 of file itkTransformPenaltyTerm.h.

DerivativeType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::DerivativeType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::DerivativeType

Definition at line 90 of file itkTransformPenaltyTerm.h.

DerivativeValueType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::DerivativeValueType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::DerivativeValueType

Definition at line 91 of file itkTransformPenaltyTerm.h.

FixedImageConstPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageConstPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageConstPointer

Definition at line 68 of file itkTransformPenaltyTerm.h.

FixedImageIndexType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageIndexType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageIndexType

protected

Typedefs for indices and points.

Definition at line 125 of file itkTransformPenaltyTerm.h.

FixedImageIndexValueType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageIndexValueType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageIndexValueType

protected

Definition at line 126 of file itkTransformPenaltyTerm.h.

FixedImageMaskPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageMaskPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskPointer

Definition at line 86 of file itkTransformPenaltyTerm.h.

FixedImageMaskType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageMaskType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageMaskType

Definition at line 85 of file itkTransformPenaltyTerm.h.

FixedImagePixelType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImagePixelType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImagePixelType

Definition at line 93 of file itkTransformPenaltyTerm.h.

FixedImagePointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImagePointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImagePointer

Definition at line 67 of file itkTransformPenaltyTerm.h.

FixedImagePointType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImagePointType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImagePointType

protected

Definition at line 128 of file itkTransformPenaltyTerm.h.

FixedImageRegionType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageRegionType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageRegionType

Definition at line 69 of file itkTransformPenaltyTerm.h.

FixedImageType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::FixedImageType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::FixedImageType

Definition at line 66 of file itkTransformPenaltyTerm.h.

GradientImageFilterPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::GradientImageFilterPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterPointer

Definition at line 84 of file itkTransformPenaltyTerm.h.

GradientImageFilterType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::GradientImageFilterType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GradientImageFilterType

Definition at line 83 of file itkTransformPenaltyTerm.h.

GradientImagePointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::GradientImagePointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GradientImagePointer

Definition at line 82 of file itkTransformPenaltyTerm.h.

GradientImageType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::GradientImageType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GradientImageType

Definition at line 81 of file itkTransformPenaltyTerm.h.

GradientPixelType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::GradientPixelType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GradientPixelType

Definition at line 80 of file itkTransformPenaltyTerm.h.

ImageSampleContainerPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::ImageSampleContainerPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerPointer

Definition at line 95 of file itkTransformPenaltyTerm.h.

ImageSampleContainerType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::ImageSampleContainerType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ImageSampleContainerType

Definition at line 94 of file itkTransformPenaltyTerm.h.

InputPointType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::InputPointType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::InputPointType

Definition at line 73 of file itkTransformPenaltyTerm.h.

InternalMatrixType

template<class TFixedImage , class TScalarType = double>

typedef TransformType::InternalMatrixType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::InternalMatrixType

Definition at line 117 of file itkTransformPenaltyTerm.h.

InterpolatorPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::InterpolatorPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::InterpolatorPointer

Definition at line 78 of file itkTransformPenaltyTerm.h.

InterpolatorType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::InterpolatorType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::InterpolatorType

Definition at line 77 of file itkTransformPenaltyTerm.h.

JacobianOfSpatialHessianType

template<class TFixedImage , class TScalarType = double>

typedef TransformType::JacobianOfSpatialHessianType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialHessianType

Definition at line 116 of file itkTransformPenaltyTerm.h.

JacobianOfSpatialJacobianType

template<class TFixedImage , class TScalarType = double>

typedef TransformType::JacobianOfSpatialJacobianType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::JacobianOfSpatialJacobianType

Definition at line 114 of file itkTransformPenaltyTerm.h.

MeasureType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MeasureType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MeasureType

Definition at line 89 of file itkTransformPenaltyTerm.h.

MovingImageConstPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageConstPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageConstPointer

Definition at line 65 of file itkTransformPenaltyTerm.h.

MovingImageContinuousIndexType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageContinuousIndexType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageContinuousIndexType

protected

Definition at line 130 of file itkTransformPenaltyTerm.h.

MovingImageIndexType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageIndexType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageIndexType

protected

Definition at line 127 of file itkTransformPenaltyTerm.h.

MovingImageMaskPointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageMaskPointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskPointer

Definition at line 88 of file itkTransformPenaltyTerm.h.

MovingImageMaskType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageMaskType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageMaskType

Definition at line 87 of file itkTransformPenaltyTerm.h.

MovingImagePixelType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImagePixelType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImagePixelType

Definition at line 63 of file itkTransformPenaltyTerm.h.

MovingImagePointer

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImagePointer itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImagePointer

Definition at line 64 of file itkTransformPenaltyTerm.h.

MovingImagePointType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImagePointType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImagePointType

protected

Definition at line 129 of file itkTransformPenaltyTerm.h.

MovingImageType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::MovingImageType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::MovingImageType

Definition at line 62 of file itkTransformPenaltyTerm.h.

NonZeroJacobianIndicesType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::NonZeroJacobianIndicesType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::NonZeroJacobianIndicesType

protected

Definition at line 131 of file itkTransformPenaltyTerm.h.

OutputPointType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::OutputPointType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::OutputPointType

Definition at line 74 of file itkTransformPenaltyTerm.h.

ParametersType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::ParametersType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ParametersType

Definition at line 92 of file itkTransformPenaltyTerm.h.

Pointer

template<class TFixedImage , class TScalarType = double>

typedef SmartPointer< Self > itk::TransformPenaltyTerm< TFixedImage, TScalarType >::Pointer

Definition at line 54 of file itkTransformPenaltyTerm.h.

RealType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::RealType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::RealType

Definition at line 79 of file itkTransformPenaltyTerm.h.

ScalarType

template<class TFixedImage , class TScalarType = double>

typedef TScalarType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ScalarType

Template parameters. FixedImageType has already been taken from superclass.

Definition at line 109 of file itkTransformPenaltyTerm.h.

Self

template<class TFixedImage , class TScalarType = double>

typedef TransformPenaltyTerm itk::TransformPenaltyTerm< TFixedImage, TScalarType >::Self

Standard ITK stuff.

Definition at line 51 of file itkTransformPenaltyTerm.h.

SpatialHessianType

template<class TFixedImage , class TScalarType = double>

typedef TransformType::SpatialHessianType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::SpatialHessianType

Definition at line 115 of file itkTransformPenaltyTerm.h.

SpatialJacobianType

template<class TFixedImage , class TScalarType = double>

typedef TransformType::SpatialJacobianType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::SpatialJacobianType

Definition at line 113 of file itkTransformPenaltyTerm.h.

Superclass

template<class TFixedImage , class TScalarType = double>

typedef AdvancedImageToImageMetric< TFixedImage, TFixedImage > itk::TransformPenaltyTerm< TFixedImage, TScalarType >::Superclass

Definition at line 53 of file itkTransformPenaltyTerm.h.

ThreaderType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::ThreaderType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ThreaderType

Definition at line 96 of file itkTransformPenaltyTerm.h.

ThreadInfoType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::ThreadInfoType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::ThreadInfoType

Definition at line 97 of file itkTransformPenaltyTerm.h.

TransformJacobianType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::TransformJacobianType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::TransformJacobianType

Definition at line 76 of file itkTransformPenaltyTerm.h.

TransformParametersType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::TransformParametersType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::TransformParametersType

Definition at line 75 of file itkTransformPenaltyTerm.h.

TransformType

template<class TFixedImage , class TScalarType = double>

typedef Superclass::AdvancedTransformType itk::TransformPenaltyTerm< TFixedImage, TScalarType >::TransformType

Typedefs from the AdvancedTransform.

Definition at line 112 of file itkTransformPenaltyTerm.h.

Constructor & Destructor Documentation

TransformPenaltyTerm() [1/2]

template<class TFixedImage , class TScalarType = double>

itk::TransformPenaltyTerm< TFixedImage, TScalarType >::TransformPenaltyTerm ( )

inlineprotected

The constructor.

Definition at line 134 of file itkTransformPenaltyTerm.h.

~TransformPenaltyTerm()

template<class TFixedImage , class TScalarType = double>

itk::TransformPenaltyTerm< TFixedImage, TScalarType >::~TransformPenaltyTerm ( )

inlineoverrideprotected

The destructor.

Definition at line 137 of file itkTransformPenaltyTerm.h.

TransformPenaltyTerm() [2/2]

template<class TFixedImage , class TScalarType = double>

itk::TransformPenaltyTerm< TFixedImage, TScalarType >::TransformPenaltyTerm ( const Self &  )

private

The private constructor.

Member Function Documentation

CheckForBSplineTransform2()

template<class TFixedImage , class TScalarType = double>

virtual bool itk::TransformPenaltyTerm< TFixedImage, TScalarType >::CheckForBSplineTransform2 ( BSplineOrder3TransformPointer &  bspline ) const

protectedvirtual

A function to check if the transform is B-spline, for speedup.

GetClassName()

template<class TFixedImage , class TScalarType = double>

virtual const char * itk::TransformPenaltyTerm< TFixedImage, TScalarType >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >.

Reimplemented in elastix::TransformBendingEnergyPenalty< TElastix >, itk::TransformBendingEnergyPenaltyTerm< TFixedImage, TScalarType >, itk::TransformBendingEnergyPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >, elastix::DisplacementMagnitudePenalty< TElastix >, itk::DisplacementMagnitudePenaltyTerm< TFixedImage, TScalarType >, itk::DisplacementMagnitudePenaltyTerm< MetricBase< TElastix >::FixedImageType, double >, elastix::DistancePreservingRigidityPenalty< TElastix >, itk::DistancePreservingRigidityPenaltyTerm< TFixedImage, TScalarType >, itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >, elastix::TransformRigidityPenalty< TElastix >, itk::TransformRigidityPenaltyTerm< TFixedImage, TScalarType >, and itk::TransformRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >.

itkStaticConstMacro()

template<class TFixedImage , class TScalarType = double>

itk::TransformPenaltyTerm< TFixedImage, TScalarType >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

Define the dimension.

operator=()

template<class TFixedImage , class TScalarType = double>

void itk::TransformPenaltyTerm< TFixedImage, TScalarType >::operator= ( const Self &  )

private

The private copy constructor.