itk::PCAMetric< TFixedImage, TMovingImage > Class Template Reference

#include <itkPCAMetric.h>

Detailed Description

template<class TFixedImage, class TMovingImage>
class itk::PCAMetric< TFixedImage, TMovingImage >

Definition at line 33 of file itkPCAMetric.h.

Inheritance diagram for itk::PCAMetric< TFixedImage, TMovingImage >:

Data Structures
struct	PCAMetricGetSamplesPerThreadStruct
struct	PCAMetricMultiThreaderParameterType

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef vnl_matrix< DerivativeValueType >	DerivativeMatrixType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType
typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType
typedef Superclass::FixedImageLimiterType	FixedImageLimiterType
typedef Superclass::FixedImageLimiterType	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef FixedImageRegionType::SizeType	FixedImageSizeType
typedef FixedImageRegionType::SizeType	FixedImageSizeType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::ImageSamplerPointer	ImageSamplerPointer
typedef Superclass::ImageSamplerPointer	ImageSamplerPointer
typedef Superclass::ImageSamplerType	ImageSamplerType
typedef Superclass::ImageSamplerType	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::InterpolatorType	InterpolatorType
typedef vnl_matrix< RealType >	MatrixType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef Superclass::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType
typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType
typedef Superclass::MovingImageLimiterType	MovingImageLimiterType
typedef Superclass::MovingImageLimiterType	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImageRegionType	MovingImageRegionType
typedef Superclass::MovingImageRegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef Superclass::RealType	RealType
typedef PCAMetric	Self
typedef PCAMetric	Self
typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage >	Superclass
typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage >	Superclass
typedef Superclass::ThreaderType	ThreaderType
typedef Superclass::ThreadInfoType	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedImageMaskSpatialObject2Type
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingImageMaskSpatialObject2Type
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< TFixedImage, TMovingImage >	Superclass
typedef itk::PlatformMultiThreader	ThreaderType
typedef ThreaderType::WorkUnitInfo	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType

Public Member Functions
virtual const char *	GetClassName () const
virtual const char *	GetClassName () const
virtual void	GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const
void	GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const override
virtual int	GetNumSamplesLastDimension () const
virtual bool	GetSampleLastDimensionRandomly () const
virtual MeasureType	GetValue (const TransformParametersType &parameters) const
MeasureType	GetValue (const TransformParametersType &parameters) const override
virtual void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const override
void	GetValueAndDerivativeSingleThreaded (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const
virtual void	Initialize (void)
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SetDeNoise (bool _arg)
virtual void	SetGridSize (FixedImageSizeType _arg)
virtual void	SetGridSize (FixedImageSizeType _arg)
virtual void	SetNumAdditionalSamplesFixed (unsigned int _arg)
virtual void	SetNumEigenValues (unsigned int _arg)
virtual void	SetNumEigenValues (unsigned int _arg)
virtual void	SetNumSamplesLastDimension (unsigned int _arg)
virtual void	SetReducedDimensionIndex (unsigned int _arg)
virtual void	SetSampleLastDimensionRandomly (bool _arg)
virtual void	SetSubtractMean (bool _arg)
virtual void	SetSubtractMean (bool _arg)
virtual void	SetTransformIsStackTransform (bool _arg)
virtual void	SetTransformIsStackTransform (bool _arg)
virtual void	SetUseDerivativeOfMean (bool _arg)
virtual void	SetVarNoise (double _arg)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const char *	GetClassName () const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const override
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()

Static Public Member Functions
static Pointer	New ()
static Pointer	New ()

Protected Types
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType
typedef Superclass::CentralDifferenceGradientFilterType	CentralDifferenceGradientFilterType
typedef Superclass::CentralDifferenceGradientFilterType	CentralDifferenceGradientFilterType
typedef itk::ContinuousIndex< CoordinateRepresentationType, FixedImageDimension >	FixedImageContinuousIndexType
typedef itk::ContinuousIndex< CoordinateRepresentationType, FixedImageDimension >	FixedImageContinuousIndexType
typedef Superclass::FixedImageIndexType	FixedImageIndexType
typedef Superclass::FixedImageIndexType	FixedImageIndexType
typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType
typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType
typedef Superclass::FixedImagePointType	FixedImagePointType
typedef Superclass::FixedImagePointType	FixedImagePointType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType
typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImagePointType	MovingImagePointType
typedef Superclass::MovingImagePointType	MovingImagePointType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType

Protected Member Functions
void	AfterThreadedComputeDerivative (DerivativeType &derivative) const
void	AfterThreadedGetSamples (MeasureType &value) const
void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const override
void	InitializeThreadingParameters (void) const override
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedPCAMetricGetSamplesPerThreadStruct, AlignedPCAMetricGetSamplesPerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, PCAMetricGetSamplesPerThreadStruct, PaddedPCAMetricGetSamplesPerThreadStruct)
void	LaunchComputeDerivativeThreaderCallback (void) const
void	LaunchGetSamplesThreaderCallback (void) const
	PCAMetric ()
	PCAMetric ()
void	PrintSelf (std::ostream &os, Indent indent) const
void	PrintSelf (std::ostream &os, Indent indent) const override
void	ThreadedComputeDerivative (ThreadIdType threadID)
void	ThreadedGetSamples (ThreadIdType threadID)
virtual	~PCAMetric ()
	~PCAMetric () override
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void)
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
	~AdvancedImageToImageMetric () override

Static Protected Member Functions
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	ComputeDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetSamplesThreaderCallback (void *arg)
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)

Protected Attributes
vnl_vector< double >	m_eigenValues
vnl_vector< double >	m_fifthEigenVector
vnl_vector< double >	m_firstEigenVector
vnl_vector< double >	m_fourthEigenVector
vnl_vector< double >	m_normdCdmu
int	m_NumberOfSamples
AlignedPCAMetricGetSamplesPerThreadStruct *	m_PCAMetricGetSamplesPerThreadVariables
ThreadIdType	m_PCAMetricGetSamplesPerThreadVariablesSize
PCAMetricMultiThreaderParameterType	m_PCAMetricThreaderParameters
vnl_vector< double >	m_secondEigenVector
vnl_vector< double >	m_seventhEigenVector
vnl_vector< double >	m_sixthEigenVector
vnl_vector< double >	m_thirdEigenVector
Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
double	m_FixedLimitRangeRatio
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
double	m_MovingLimitRangeRatio
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP

Private Member Functions
void	operator= (const Self &)
void	operator= (const Self &)
	PCAMetric (const Self &)
	PCAMetric (const Self &)
void	SampleRandom (const int n, const int m, std::vector< int > &numbers) const

Private Attributes
MatrixType	m_Atmm
DerivativeMatrixType	m_CSv
bool	m_DeNoise
unsigned int	m_G
FixedImageSizeType	m_GridSize
unsigned int	m_LastDimIndex
unsigned int	m_NumAdditionalSamplesFixed
unsigned int	m_NumEigenValues
unsigned int	m_NumSamplesLastDimension
std::vector< unsigned int >	m_PixelStartIndex
unsigned int	m_ReducedDimensionIndex
bool	m_SampleLastDimensionRandomly
bool	m_SubtractMean
DerivativeMatrixType	m_Sv
bool	m_TransformIsStackTransform
bool	m_UseDerivativeOfMean
double	m_VarNoise
DerivativeMatrixType	m_vdSdmu_part1
DerivativeMatrixType	m_vSAtmm

Member Typedef Documentation

BSplineInterpolatorType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::BSplineInterpolatorType itk::PCAMetric< TFixedImage, TMovingImage >::BSplineInterpolatorType

protected

Definition at line 158 of file itkPCAMetric.h.

BSplineInterpolatorType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::BSplineInterpolatorType itk::PCAMetric< TFixedImage, TMovingImage >::BSplineInterpolatorType

protected

Definition at line 157 of file itkPCAMetric_F_multithreaded.h.

CentralDifferenceGradientFilterType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::CentralDifferenceGradientFilterType itk::PCAMetric< TFixedImage, TMovingImage >::CentralDifferenceGradientFilterType

protected

Definition at line 159 of file itkPCAMetric.h.

CentralDifferenceGradientFilterType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::CentralDifferenceGradientFilterType itk::PCAMetric< TFixedImage, TMovingImage >::CentralDifferenceGradientFilterType

protected

Definition at line 158 of file itkPCAMetric_F_multithreaded.h.

ConstPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef SmartPointer< const Self > itk::PCAMetric< TFixedImage, TMovingImage >::ConstPointer

Definition at line 43 of file itkPCAMetric.h.

ConstPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef SmartPointer< const Self > itk::PCAMetric< TFixedImage, TMovingImage >::ConstPointer

Definition at line 41 of file itkPCAMetric_F_multithreaded.h.

CoordinateRepresentationType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::CoordinateRepresentationType itk::PCAMetric< TFixedImage, TMovingImage >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 73 of file itkPCAMetric.h.

CoordinateRepresentationType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::CoordinateRepresentationType itk::PCAMetric< TFixedImage, TMovingImage >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 60 of file itkPCAMetric_F_multithreaded.h.

DerivativeMatrixType

template<class TFixedImage , class TMovingImage >

typedef vnl_matrix< DerivativeValueType > itk::PCAMetric< TFixedImage, TMovingImage >::DerivativeMatrixType

Definition at line 107 of file itkPCAMetric_F_multithreaded.h.

DerivativeType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::DerivativeType itk::PCAMetric< TFixedImage, TMovingImage >::DerivativeType

Definition at line 98 of file itkPCAMetric.h.

DerivativeType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::DerivativeType itk::PCAMetric< TFixedImage, TMovingImage >::DerivativeType

Definition at line 85 of file itkPCAMetric_F_multithreaded.h.

DerivativeValueType

template<class TFixedImage , class TMovingImage >

typedef DerivativeType::ValueType itk::PCAMetric< TFixedImage, TMovingImage >::DerivativeValueType

Definition at line 102 of file itkPCAMetric_F_multithreaded.h.

FixedImageConstPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageConstPointer itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageConstPointer

Definition at line 78 of file itkPCAMetric.h.

FixedImageConstPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageConstPointer itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageConstPointer

Definition at line 65 of file itkPCAMetric_F_multithreaded.h.

FixedImageContinuousIndexType [1/2]

template<class TFixedImage , class TMovingImage >

typedef itk::ContinuousIndex< CoordinateRepresentationType, FixedImageDimension > itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageContinuousIndexType

protected

Definition at line 155 of file itkPCAMetric.h.

FixedImageContinuousIndexType [2/2]

template<class TFixedImage , class TMovingImage >

typedef itk::ContinuousIndex< CoordinateRepresentationType, FixedImageDimension > itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageContinuousIndexType

protected

Definition at line 154 of file itkPCAMetric_F_multithreaded.h.

FixedImageIndexType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageIndexType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageIndexType

protected

Protected Typedefs Typedefs inherited from superclass

Definition at line 150 of file itkPCAMetric.h.

FixedImageIndexType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageIndexType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageIndexType

protected

Protected Typedefs Typedefs inherited from superclass

Definition at line 149 of file itkPCAMetric_F_multithreaded.h.

FixedImageIndexValueType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageIndexValueType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageIndexValueType

protected

Definition at line 151 of file itkPCAMetric.h.

FixedImageIndexValueType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageIndexValueType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageIndexValueType

protected

Definition at line 150 of file itkPCAMetric_F_multithreaded.h.

FixedImageLimiterOutputType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageLimiterOutputType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageLimiterOutputType

Definition at line 110 of file itkPCAMetric.h.

FixedImageLimiterOutputType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageLimiterOutputType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageLimiterOutputType

Definition at line 97 of file itkPCAMetric_F_multithreaded.h.

FixedImageLimiterType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageLimiterType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageLimiterType

Definition at line 107 of file itkPCAMetric.h.

FixedImageLimiterType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageLimiterType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageLimiterType

Definition at line 94 of file itkPCAMetric_F_multithreaded.h.

FixedImageMaskPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageMaskPointer itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageMaskPointer

Definition at line 94 of file itkPCAMetric.h.

FixedImageMaskPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageMaskPointer itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageMaskPointer

Definition at line 81 of file itkPCAMetric_F_multithreaded.h.

FixedImageMaskType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageMaskType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageMaskType

Definition at line 93 of file itkPCAMetric.h.

FixedImageMaskType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageMaskType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageMaskType

Definition at line 80 of file itkPCAMetric_F_multithreaded.h.

FixedImagePixelType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImagePixelType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImagePixelType

Definition at line 100 of file itkPCAMetric.h.

FixedImagePixelType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImagePixelType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImagePixelType

Definition at line 87 of file itkPCAMetric_F_multithreaded.h.

FixedImagePointType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImagePointType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImagePointType

protected

Definition at line 153 of file itkPCAMetric.h.

FixedImagePointType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImagePointType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImagePointType

protected

Definition at line 152 of file itkPCAMetric_F_multithreaded.h.

FixedImageRegionType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageRegionType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageRegionType

Definition at line 45 of file itkPCAMetric.h.

FixedImageRegionType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageRegionType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageRegionType

Definition at line 43 of file itkPCAMetric_F_multithreaded.h.

FixedImageSizeType [1/2]

template<class TFixedImage , class TMovingImage >

typedef FixedImageRegionType::SizeType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageSizeType

Definition at line 46 of file itkPCAMetric.h.

FixedImageSizeType [2/2]

template<class TFixedImage , class TMovingImage >

typedef FixedImageRegionType::SizeType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageSizeType

Definition at line 44 of file itkPCAMetric_F_multithreaded.h.

FixedImageType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageType

Definition at line 77 of file itkPCAMetric.h.

FixedImageType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::FixedImageType itk::PCAMetric< TFixedImage, TMovingImage >::FixedImageType

Definition at line 64 of file itkPCAMetric_F_multithreaded.h.

GradientImageFilterPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageFilterPointer itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageFilterPointer

Definition at line 92 of file itkPCAMetric.h.

GradientImageFilterPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageFilterPointer itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageFilterPointer

Definition at line 79 of file itkPCAMetric_F_multithreaded.h.

GradientImageFilterType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageFilterType itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageFilterType

Definition at line 91 of file itkPCAMetric.h.

GradientImageFilterType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageFilterType itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageFilterType

Definition at line 78 of file itkPCAMetric_F_multithreaded.h.

GradientImagePointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImagePointer itk::PCAMetric< TFixedImage, TMovingImage >::GradientImagePointer

Definition at line 90 of file itkPCAMetric.h.

GradientImagePointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImagePointer itk::PCAMetric< TFixedImage, TMovingImage >::GradientImagePointer

Definition at line 77 of file itkPCAMetric_F_multithreaded.h.

GradientImageType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageType itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageType

Definition at line 89 of file itkPCAMetric.h.

GradientImageType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientImageType itk::PCAMetric< TFixedImage, TMovingImage >::GradientImageType

Definition at line 76 of file itkPCAMetric_F_multithreaded.h.

GradientPixelType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientPixelType itk::PCAMetric< TFixedImage, TMovingImage >::GradientPixelType

Definition at line 88 of file itkPCAMetric.h.

GradientPixelType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::GradientPixelType itk::PCAMetric< TFixedImage, TMovingImage >::GradientPixelType

Definition at line 75 of file itkPCAMetric_F_multithreaded.h.

ImageSampleContainerPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSampleContainerPointer itk::PCAMetric< TFixedImage, TMovingImage >::ImageSampleContainerPointer

Definition at line 106 of file itkPCAMetric.h.

ImageSampleContainerPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSampleContainerPointer itk::PCAMetric< TFixedImage, TMovingImage >::ImageSampleContainerPointer

Definition at line 93 of file itkPCAMetric_F_multithreaded.h.

ImageSampleContainerType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSampleContainerType itk::PCAMetric< TFixedImage, TMovingImage >::ImageSampleContainerType

Definition at line 104 of file itkPCAMetric.h.

ImageSampleContainerType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSampleContainerType itk::PCAMetric< TFixedImage, TMovingImage >::ImageSampleContainerType

Definition at line 91 of file itkPCAMetric_F_multithreaded.h.

ImageSamplerPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSamplerPointer itk::PCAMetric< TFixedImage, TMovingImage >::ImageSamplerPointer

Definition at line 103 of file itkPCAMetric.h.

ImageSamplerPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSamplerPointer itk::PCAMetric< TFixedImage, TMovingImage >::ImageSamplerPointer

Definition at line 90 of file itkPCAMetric_F_multithreaded.h.

ImageSamplerType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSamplerType itk::PCAMetric< TFixedImage, TMovingImage >::ImageSamplerType

Definition at line 102 of file itkPCAMetric.h.

ImageSamplerType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ImageSamplerType itk::PCAMetric< TFixedImage, TMovingImage >::ImageSamplerType

Definition at line 89 of file itkPCAMetric_F_multithreaded.h.

InputPointType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InputPointType itk::PCAMetric< TFixedImage, TMovingImage >::InputPointType

Definition at line 81 of file itkPCAMetric.h.

InputPointType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InputPointType itk::PCAMetric< TFixedImage, TMovingImage >::InputPointType

Definition at line 68 of file itkPCAMetric_F_multithreaded.h.

InterpolatorPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InterpolatorPointer itk::PCAMetric< TFixedImage, TMovingImage >::InterpolatorPointer

Definition at line 86 of file itkPCAMetric.h.

InterpolatorPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InterpolatorPointer itk::PCAMetric< TFixedImage, TMovingImage >::InterpolatorPointer

Definition at line 73 of file itkPCAMetric_F_multithreaded.h.

InterpolatorType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InterpolatorType itk::PCAMetric< TFixedImage, TMovingImage >::InterpolatorType

Definition at line 85 of file itkPCAMetric.h.

InterpolatorType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::InterpolatorType itk::PCAMetric< TFixedImage, TMovingImage >::InterpolatorType

Definition at line 72 of file itkPCAMetric_F_multithreaded.h.

MatrixType

template<class TFixedImage , class TMovingImage >

typedef vnl_matrix< RealType > itk::PCAMetric< TFixedImage, TMovingImage >::MatrixType

Definition at line 106 of file itkPCAMetric_F_multithreaded.h.

MeasureType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MeasureType itk::PCAMetric< TFixedImage, TMovingImage >::MeasureType

Definition at line 97 of file itkPCAMetric.h.

MeasureType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MeasureType itk::PCAMetric< TFixedImage, TMovingImage >::MeasureType

Definition at line 84 of file itkPCAMetric_F_multithreaded.h.

MovingImageConstPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageConstPointer itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageConstPointer

Definition at line 76 of file itkPCAMetric.h.

MovingImageConstPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageConstPointer itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageConstPointer

Definition at line 63 of file itkPCAMetric_F_multithreaded.h.

MovingImageContinuousIndexType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageContinuousIndexType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageContinuousIndexType

protected

Definition at line 157 of file itkPCAMetric.h.

MovingImageContinuousIndexType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageContinuousIndexType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageContinuousIndexType

protected

Definition at line 156 of file itkPCAMetric_F_multithreaded.h.

MovingImageDerivativeScalesType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageDerivativeScalesType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageDerivativeScalesType

Definition at line 114 of file itkPCAMetric.h.

MovingImageDerivativeScalesType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageDerivativeScalesType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageDerivativeScalesType

Definition at line 101 of file itkPCAMetric_F_multithreaded.h.

MovingImageDerivativeType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageDerivativeType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageDerivativeType

protected

Definition at line 160 of file itkPCAMetric.h.

MovingImageDerivativeType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageDerivativeType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageDerivativeType

protected

Definition at line 159 of file itkPCAMetric_F_multithreaded.h.

MovingImageIndexType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageIndexType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageIndexType

protected

Definition at line 152 of file itkPCAMetric.h.

MovingImageIndexType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageIndexType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageIndexType

protected

Definition at line 151 of file itkPCAMetric_F_multithreaded.h.

MovingImageLimiterOutputType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageLimiterOutputType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageLimiterOutputType

Definition at line 112 of file itkPCAMetric.h.

MovingImageLimiterOutputType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageLimiterOutputType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageLimiterOutputType

Definition at line 99 of file itkPCAMetric_F_multithreaded.h.

MovingImageLimiterType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageLimiterType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageLimiterType

Definition at line 108 of file itkPCAMetric.h.

MovingImageLimiterType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageLimiterType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageLimiterType

Definition at line 95 of file itkPCAMetric_F_multithreaded.h.

MovingImageMaskPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageMaskPointer itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageMaskPointer

Definition at line 96 of file itkPCAMetric.h.

MovingImageMaskPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageMaskPointer itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageMaskPointer

Definition at line 83 of file itkPCAMetric_F_multithreaded.h.

MovingImageMaskType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageMaskType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageMaskType

Definition at line 95 of file itkPCAMetric.h.

MovingImageMaskType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageMaskType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageMaskType

Definition at line 82 of file itkPCAMetric_F_multithreaded.h.

MovingImagePixelType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImagePixelType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImagePixelType

Definition at line 75 of file itkPCAMetric.h.

MovingImagePixelType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImagePixelType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImagePixelType

Definition at line 62 of file itkPCAMetric_F_multithreaded.h.

MovingImagePointType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImagePointType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImagePointType

protected

Definition at line 156 of file itkPCAMetric.h.

MovingImagePointType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImagePointType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImagePointType

protected

Definition at line 155 of file itkPCAMetric_F_multithreaded.h.

MovingImageRegionType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageRegionType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageRegionType

Definition at line 101 of file itkPCAMetric.h.

MovingImageRegionType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageRegionType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageRegionType

Definition at line 88 of file itkPCAMetric_F_multithreaded.h.

MovingImageType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageType

Definition at line 74 of file itkPCAMetric.h.

MovingImageType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::MovingImageType itk::PCAMetric< TFixedImage, TMovingImage >::MovingImageType

Definition at line 61 of file itkPCAMetric_F_multithreaded.h.

NonZeroJacobianIndicesType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::NonZeroJacobianIndicesType itk::PCAMetric< TFixedImage, TMovingImage >::NonZeroJacobianIndicesType

protected

Definition at line 161 of file itkPCAMetric.h.

NonZeroJacobianIndicesType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::NonZeroJacobianIndicesType itk::PCAMetric< TFixedImage, TMovingImage >::NonZeroJacobianIndicesType

protected

Definition at line 160 of file itkPCAMetric_F_multithreaded.h.

OutputPointType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::OutputPointType itk::PCAMetric< TFixedImage, TMovingImage >::OutputPointType

Definition at line 82 of file itkPCAMetric.h.

OutputPointType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::OutputPointType itk::PCAMetric< TFixedImage, TMovingImage >::OutputPointType

Definition at line 69 of file itkPCAMetric_F_multithreaded.h.

ParametersType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ParametersType itk::PCAMetric< TFixedImage, TMovingImage >::ParametersType

Definition at line 99 of file itkPCAMetric.h.

ParametersType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::ParametersType itk::PCAMetric< TFixedImage, TMovingImage >::ParametersType

Definition at line 86 of file itkPCAMetric_F_multithreaded.h.

Pointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef SmartPointer< Self > itk::PCAMetric< TFixedImage, TMovingImage >::Pointer

Definition at line 42 of file itkPCAMetric.h.

Pointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef SmartPointer< Self > itk::PCAMetric< TFixedImage, TMovingImage >::Pointer

Definition at line 40 of file itkPCAMetric_F_multithreaded.h.

RealType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::RealType itk::PCAMetric< TFixedImage, TMovingImage >::RealType

Definition at line 87 of file itkPCAMetric.h.

RealType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::RealType itk::PCAMetric< TFixedImage, TMovingImage >::RealType

Definition at line 74 of file itkPCAMetric_F_multithreaded.h.

Self [1/2]

template<class TFixedImage , class TMovingImage >

typedef PCAMetric itk::PCAMetric< TFixedImage, TMovingImage >::Self

Standard class typedefs.

Definition at line 39 of file itkPCAMetric.h.

Self [2/2]

template<class TFixedImage , class TMovingImage >

typedef PCAMetric itk::PCAMetric< TFixedImage, TMovingImage >::Self

Standard class typedefs.

Definition at line 37 of file itkPCAMetric_F_multithreaded.h.

Superclass [1/2]

template<class TFixedImage , class TMovingImage >

typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage > itk::PCAMetric< TFixedImage, TMovingImage >::Superclass

Definition at line 41 of file itkPCAMetric.h.

Superclass [2/2]

template<class TFixedImage , class TMovingImage >

typedef AdvancedImageToImageMetric< TFixedImage, TMovingImage > itk::PCAMetric< TFixedImage, TMovingImage >::Superclass

Definition at line 39 of file itkPCAMetric_F_multithreaded.h.

ThreaderType

template<class TFixedImage , class TMovingImage >

typedef Superclass::ThreaderType itk::PCAMetric< TFixedImage, TMovingImage >::ThreaderType

Definition at line 103 of file itkPCAMetric_F_multithreaded.h.

ThreadInfoType

template<class TFixedImage , class TMovingImage >

typedef Superclass::ThreadInfoType itk::PCAMetric< TFixedImage, TMovingImage >::ThreadInfoType

Definition at line 104 of file itkPCAMetric_F_multithreaded.h.

TransformJacobianType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformJacobianType itk::PCAMetric< TFixedImage, TMovingImage >::TransformJacobianType

Definition at line 84 of file itkPCAMetric.h.

TransformJacobianType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformJacobianType itk::PCAMetric< TFixedImage, TMovingImage >::TransformJacobianType

Definition at line 71 of file itkPCAMetric_F_multithreaded.h.

TransformParametersType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformParametersType itk::PCAMetric< TFixedImage, TMovingImage >::TransformParametersType

Definition at line 83 of file itkPCAMetric.h.

TransformParametersType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformParametersType itk::PCAMetric< TFixedImage, TMovingImage >::TransformParametersType

Definition at line 70 of file itkPCAMetric_F_multithreaded.h.

TransformPointer [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformPointer itk::PCAMetric< TFixedImage, TMovingImage >::TransformPointer

Definition at line 80 of file itkPCAMetric.h.

TransformPointer [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformPointer itk::PCAMetric< TFixedImage, TMovingImage >::TransformPointer

Definition at line 67 of file itkPCAMetric_F_multithreaded.h.

TransformType [1/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformType itk::PCAMetric< TFixedImage, TMovingImage >::TransformType

Definition at line 79 of file itkPCAMetric.h.

TransformType [2/2]

template<class TFixedImage , class TMovingImage >

typedef Superclass::TransformType itk::PCAMetric< TFixedImage, TMovingImage >::TransformType

Definition at line 66 of file itkPCAMetric_F_multithreaded.h.

Constructor & Destructor Documentation

PCAMetric() [1/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::PCAMetric ( )

protected

~PCAMetric() [1/2]

template<class TFixedImage , class TMovingImage >

virtual itk::PCAMetric< TFixedImage, TMovingImage >::~PCAMetric ( )

inlineprotectedvirtual

Reimplemented in elastix::PCAMetric< TElastix >.

Definition at line 144 of file itkPCAMetric.h.

PCAMetric() [2/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::PCAMetric ( const Self &  )

private

PCAMetric() [3/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::PCAMetric ( )

protected

~PCAMetric() [2/2]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::~PCAMetric ( )

overrideprotected

PCAMetric() [4/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::PCAMetric ( const Self &  )

private

Member Function Documentation

AfterThreadedComputeDerivative()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::AfterThreadedComputeDerivative ( DerivativeType &  derivative ) const

inlineprotected

AfterThreadedGetSamples()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::AfterThreadedGetSamples ( MeasureType &  value ) const

inlineprotected

Gather the values and derivatives from all threads

ComputeDerivativeThreaderCallback()

template<class TFixedImage , class TMovingImage >

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION itk::PCAMetric< TFixedImage, TMovingImage >::ComputeDerivativeThreaderCallback ( void *  arg )

staticprotected

EvaluateTransformJacobianInnerProduct() [1/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::EvaluateTransformJacobianInnerProduct ( const TransformJacobianType &  jacobian, const MovingImageDerivativeType &  movingImageDerivative, DerivativeType &  imageJacobian  ) const

protectedvirtual

Computes the innerproduct of transform Jacobian with moving image gradient. The results are stored in imageJacobian, which is supposed to have the right size (same length as Jacobian's number of columns).

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.

EvaluateTransformJacobianInnerProduct() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::EvaluateTransformJacobianInnerProduct ( const TransformJacobianType &  jacobian, const MovingImageDerivativeType &  movingImageDerivative, DerivativeType &  imageJacobian  ) const

overrideprotectedvirtual

Computes the innerproduct of transform Jacobian with moving image gradient. The results are stored in imageJacobian, which is supposed to have the right size (same length as Jacobian's number of columns).

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.

GetClassName() [1/2]

template<class TFixedImage , class TMovingImage >

virtual const char * itk::PCAMetric< TFixedImage, TMovingImage >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in elastix::PCAMetric< TElastix >.

GetClassName() [2/2]

template<class TFixedImage , class TMovingImage >

virtual const char * itk::PCAMetric< TFixedImage, TMovingImage >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.

Reimplemented in elastix::PCAMetric< TElastix >.

GetDerivative() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::GetDerivative ( const TransformParametersType &  parameters, DerivativeType &  derivative  ) const

virtual

Get the derivatives of the match measure.

GetDerivative() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::GetDerivative ( const TransformParametersType &  parameters, DerivativeType &  derivative  ) const

override

Get the derivatives of the match measure.

GetNumSamplesLastDimension()

template<class TFixedImage , class TMovingImage >

virtual int itk::PCAMetric< TFixedImage, TMovingImage >::GetNumSamplesLastDimension ( ) const

virtual

GetSampleLastDimensionRandomly()

template<class TFixedImage , class TMovingImage >

virtual bool itk::PCAMetric< TFixedImage, TMovingImage >::GetSampleLastDimensionRandomly ( ) const

virtual

Get functions.

GetSamplesThreaderCallback()

template<class TFixedImage , class TMovingImage >

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION itk::PCAMetric< TFixedImage, TMovingImage >::GetSamplesThreaderCallback ( void *  arg )

staticprotected

Helper function to launch the threads.

GetValue() [1/2]

template<class TFixedImage , class TMovingImage >

virtual MeasureType itk::PCAMetric< TFixedImage, TMovingImage >::GetValue ( const TransformParametersType &  parameters ) const

virtual

Get the value for single valued optimizers.

GetValue() [2/2]

template<class TFixedImage , class TMovingImage >

MeasureType itk::PCAMetric< TFixedImage, TMovingImage >::GetValue ( const TransformParametersType &  parameters ) const

override

Get the value for single valued optimizers.

GetValueAndDerivative() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::GetValueAndDerivative ( const TransformParametersType &  parameters, MeasureType &  Value, DerivativeType &  Derivative  ) const

virtual

Get value and derivatives for multiple valued optimizers.

GetValueAndDerivative() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::GetValueAndDerivative ( const TransformParametersType &  parameters, MeasureType &  Value, DerivativeType &  Derivative  ) const

override

GetValueAndDerivativeSingleThreaded()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeSingleThreaded	(	const TransformParametersType &	parameters,
		MeasureType &	Value,
		DerivativeType &	Derivative
	)		const

Get value and derivatives for multiple valued optimizers.

Initialize() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::Initialize ( void  )

virtual

Initialize the Metric by making sure that all the components are present and plugged together correctly.

• Call the superclass' implementation.
  

Reimplemented in elastix::PCAMetric< TElastix >.

Initialize() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::Initialize ( void  )

override

Initialize the Metric by making sure that all the components are present and plugged together correctly.

• Call the superclass' implementation.
  

InitializeThreadingParameters()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::InitializeThreadingParameters ( void  ) const

overrideprotectedvirtual

Initialize some multi-threading related parameters.

Reimplemented from itk::AdvancedImageToImageMetric< TFixedImage, TMovingImage >.

itkAlignedTypedef()

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkAlignedTypedef ( ITK_CACHE_LINE_ALIGNMENT  , PaddedPCAMetricGetSamplesPerThreadStruct  , AlignedPCAMetricGetSamplesPerThreadStruct    )

protected

itkPadStruct()

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkPadStruct ( ITK_CACHE_LINE_ALIGNMENT  , PCAMetricGetSamplesPerThreadStruct  , PaddedPCAMetricGetSamplesPerThreadStruct    )

protected

itkStaticConstMacro() [1/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

itkStaticConstMacro() [2/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

itkStaticConstMacro() [3/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

itkStaticConstMacro() [4/4]

template<class TFixedImage , class TMovingImage >

itk::PCAMetric< TFixedImage, TMovingImage >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

LaunchComputeDerivativeThreaderCallback()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::LaunchComputeDerivativeThreaderCallback ( void  ) const

protected

LaunchGetSamplesThreaderCallback()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::LaunchGetSamplesThreaderCallback ( void  ) const

protected

Helper functions to launch the threads.

New() [1/2]

template<class TFixedImage , class TMovingImage >

static Pointer itk::PCAMetric< TFixedImage, TMovingImage >::New ( )

static

Method for creation through the object factory.

New() [2/2]

template<class TFixedImage , class TMovingImage >

static Pointer itk::PCAMetric< TFixedImage, TMovingImage >::New ( )

static

Method for creation through the object factory.

operator=() [1/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::operator= ( const Self &  )

private

operator=() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::operator= ( const Self &  )

private

PrintSelf() [1/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

protected

PrintSelf() [2/2]

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::PrintSelf ( std::ostream &  os, Indent  indent  ) const

overrideprotected

SampleRandom()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::SampleRandom ( const int  n, const int  m, std::vector< int > &  numbers  ) const

private

Sample n random numbers from 0..m and add them to the vector.

SetDeNoise()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetDeNoise ( bool  _arg )

virtual

SetGridSize() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetGridSize ( FixedImageSizeType  _arg )

virtual

SetGridSize() [2/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetGridSize ( FixedImageSizeType  _arg )

virtual

SetNumAdditionalSamplesFixed()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetNumAdditionalSamplesFixed ( unsigned int  _arg )

virtual

SetNumEigenValues() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetNumEigenValues ( unsigned int  _arg )

virtual

SetNumEigenValues() [2/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetNumEigenValues ( unsigned int  _arg )

virtual

SetNumSamplesLastDimension()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetNumSamplesLastDimension ( unsigned int  _arg )

virtual

SetReducedDimensionIndex()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetReducedDimensionIndex ( unsigned int  _arg )

virtual

SetSampleLastDimensionRandomly()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetSampleLastDimensionRandomly ( bool  _arg )

virtual

Set functions.

SetSubtractMean() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetSubtractMean ( bool  _arg )

virtual

SetSubtractMean() [2/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetSubtractMean ( bool  _arg )

virtual

Set functions.

SetTransformIsStackTransform() [1/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetTransformIsStackTransform ( bool  _arg )

virtual

SetTransformIsStackTransform() [2/2]

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetTransformIsStackTransform ( bool  _arg )

virtual

SetUseDerivativeOfMean()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetUseDerivativeOfMean ( bool  _arg )

virtual

SetVarNoise()

template<class TFixedImage , class TMovingImage >

virtual void itk::PCAMetric< TFixedImage, TMovingImage >::SetVarNoise ( double  _arg )

virtual

ThreadedComputeDerivative()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::ThreadedComputeDerivative ( ThreadIdType  threadID )

inlineprotected

ThreadedGetSamples()

template<class TFixedImage , class TMovingImage >

void itk::PCAMetric< TFixedImage, TMovingImage >::ThreadedGetSamples ( ThreadIdType  threadID )

inlineprotected

Get value and derivatives for each thread.

Field Documentation

m_Atmm

template<class TFixedImage , class TMovingImage >

MatrixType itk::PCAMetric< TFixedImage, TMovingImage >::m_Atmm

mutableprivate

Definition at line 240 of file itkPCAMetric_F_multithreaded.h.

m_CSv

template<class TFixedImage , class TMovingImage >

DerivativeMatrixType itk::PCAMetric< TFixedImage, TMovingImage >::m_CSv

mutableprivate

Definition at line 242 of file itkPCAMetric_F_multithreaded.h.

m_DeNoise

template<class TFixedImage , class TMovingImage >

bool itk::PCAMetric< TFixedImage, TMovingImage >::m_DeNoise

private

Definition at line 196 of file itkPCAMetric.h.

m_eigenValues

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_eigenValues

mutableprotected

Definition at line 178 of file itkPCAMetric.h.

m_fifthEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_fifthEigenVector

mutableprotected

Definition at line 175 of file itkPCAMetric.h.

m_firstEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_firstEigenVector

mutableprotected

Definition at line 171 of file itkPCAMetric.h.

m_fourthEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_fourthEigenVector

mutableprotected

Definition at line 174 of file itkPCAMetric.h.

m_G

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_G

private

Definition at line 223 of file itkPCAMetric_F_multithreaded.h.

m_GridSize

template<class TFixedImage , class TMovingImage >

FixedImageSizeType itk::PCAMetric< TFixedImage, TMovingImage >::m_GridSize

private

GridSize of B-spline transform.

Definition at line 204 of file itkPCAMetric.h.

m_LastDimIndex

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_LastDimIndex

private

Definition at line 224 of file itkPCAMetric_F_multithreaded.h.

m_normdCdmu

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_normdCdmu

mutableprotected

Definition at line 179 of file itkPCAMetric.h.

m_NumAdditionalSamplesFixed

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_NumAdditionalSamplesFixed

private

Definition at line 193 of file itkPCAMetric.h.

m_NumberOfSamples

template<class TFixedImage , class TMovingImage >

int itk::PCAMetric< TFixedImage, TMovingImage >::m_NumberOfSamples

mutableprotected

Definition at line 180 of file itkPCAMetric.h.

m_NumEigenValues

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_NumEigenValues

private

Integer to indicate how many eigenvalues you want to use in the metric

Definition at line 210 of file itkPCAMetric.h.

m_NumSamplesLastDimension

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_NumSamplesLastDimension

private

Definition at line 192 of file itkPCAMetric.h.

m_PCAMetricGetSamplesPerThreadVariables

template<class TFixedImage , class TMovingImage >

AlignedPCAMetricGetSamplesPerThreadStruct* itk::PCAMetric< TFixedImage, TMovingImage >::m_PCAMetricGetSamplesPerThreadVariables

mutableprotected

Definition at line 192 of file itkPCAMetric_F_multithreaded.h.

m_PCAMetricGetSamplesPerThreadVariablesSize

template<class TFixedImage , class TMovingImage >

ThreadIdType itk::PCAMetric< TFixedImage, TMovingImage >::m_PCAMetricGetSamplesPerThreadVariablesSize

mutableprotected

Definition at line 193 of file itkPCAMetric_F_multithreaded.h.

m_PCAMetricThreaderParameters

template<class TFixedImage , class TMovingImage >

PCAMetricMultiThreaderParameterType itk::PCAMetric< TFixedImage, TMovingImage >::m_PCAMetricThreaderParameters

protected

Definition at line 175 of file itkPCAMetric_F_multithreaded.h.

m_PixelStartIndex

template<class TFixedImage , class TMovingImage >

std::vector< unsigned int > itk::PCAMetric< TFixedImage, TMovingImage >::m_PixelStartIndex

mutableprivate

Matrices, needed for derivative calculation

Definition at line 239 of file itkPCAMetric_F_multithreaded.h.

m_ReducedDimensionIndex

template<class TFixedImage , class TMovingImage >

unsigned int itk::PCAMetric< TFixedImage, TMovingImage >::m_ReducedDimensionIndex

private

Definition at line 194 of file itkPCAMetric.h.

m_SampleLastDimensionRandomly

template<class TFixedImage , class TMovingImage >

bool itk::PCAMetric< TFixedImage, TMovingImage >::m_SampleLastDimensionRandomly

private

Variables to control random sampling in last dimension.

Definition at line 191 of file itkPCAMetric.h.

m_secondEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_secondEigenVector

mutableprotected

Definition at line 172 of file itkPCAMetric.h.

m_seventhEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_seventhEigenVector

mutableprotected

Definition at line 177 of file itkPCAMetric.h.

m_sixthEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_sixthEigenVector

mutableprotected

Definition at line 176 of file itkPCAMetric.h.

m_SubtractMean

template<class TFixedImage , class TMovingImage >

bool itk::PCAMetric< TFixedImage, TMovingImage >::m_SubtractMean

private

Bool to determine if we want to subtract the mean derivate from the derivative elements.

Definition at line 201 of file itkPCAMetric.h.

m_Sv

template<class TFixedImage , class TMovingImage >

DerivativeMatrixType itk::PCAMetric< TFixedImage, TMovingImage >::m_Sv

mutableprivate

Definition at line 243 of file itkPCAMetric_F_multithreaded.h.

m_thirdEigenVector

template<class TFixedImage , class TMovingImage >

vnl_vector< double > itk::PCAMetric< TFixedImage, TMovingImage >::m_thirdEigenVector

mutableprotected

Definition at line 173 of file itkPCAMetric.h.

m_TransformIsStackTransform

template<class TFixedImage , class TMovingImage >

bool itk::PCAMetric< TFixedImage, TMovingImage >::m_TransformIsStackTransform

private

Bool to indicate if the transform used is a stacktransform. Set by elx files.

Definition at line 207 of file itkPCAMetric.h.

m_UseDerivativeOfMean

template<class TFixedImage , class TMovingImage >

bool itk::PCAMetric< TFixedImage, TMovingImage >::m_UseDerivativeOfMean

private

Definition at line 212 of file itkPCAMetric.h.

m_VarNoise

template<class TFixedImage , class TMovingImage >

double itk::PCAMetric< TFixedImage, TMovingImage >::m_VarNoise

private

Definition at line 198 of file itkPCAMetric.h.

m_vdSdmu_part1

template<class TFixedImage , class TMovingImage >

DerivativeMatrixType itk::PCAMetric< TFixedImage, TMovingImage >::m_vdSdmu_part1

mutableprivate

Definition at line 244 of file itkPCAMetric_F_multithreaded.h.

m_vSAtmm

template<class TFixedImage , class TMovingImage >

DerivativeMatrixType itk::PCAMetric< TFixedImage, TMovingImage >::m_vSAtmm

mutableprivate

Definition at line 241 of file itkPCAMetric_F_multithreaded.h.