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#include <itkMultiResolutionGaussianSmoothingPyramidImageFilter.h>
Framework for creating images in a multi-resolution pyramid.
MultiResolutionGaussianSmoothingPyramidImageFilter creates an image pryamid according to a user defined multi-resolution schedule.
This class inherits from the MultiResolutionPyramidImageFilter. It applies the same smoothing but does NOT do the downsampling.
The multi-resolution schedule is still specified in terms for 'shrink factors' at each multi-resolution level for each dimension (although, actual shrinking is not performed).
A user can either use the default schedules or specify each factor in the schedules directly.
The schedule is stored as an unsigned int matrix. An element of the table can be access via the double bracket notation: table[resLevel][dimension]
For example: 8 4 4 4 4 2
is a schedule for two computation level. In the first (coarest) level the image is reduce by a factor of 8 in the column dimension, factor of 4 in the row dimension and factor of 4 in the slice dimension. In the second level, the image is reduce by a factor of 4 in the column dimension, 4 is the row dimension and 2 in the slice dimension.
The method SetNumberOfLevels() set the number of computation levels in the pyramid. This method will allocate memory for the multi-resolution schedule table. This method generates defaults tables with the starting shrink factor for all dimension set to 2^(NumberOfLevel - 1). All factors are halved for all subsequent levels. For example if the number of levels was set to 4, the default table is:
8 8 8 4 4 4 2 2 2 1 1 1
The user can get a copy of the schedule via GetSchedule() They may make alteration and reset it using SetSchedule().
A user can create a default table by specifying the starting shrink factors via methods SetStartingShrinkFactors() The factors for subsequent level is generated by halving the factor or setting to one, depending on which is larger.
For example, for 4 levels and starting factors of 8,8,4 the default table would be:
8 8 4 4 4 2 2 2 1 1 1 1
When this filter is updated, NumberOfLevels outputs are produced. The N'th output correspond to the N'th level of the pyramid.
To generate each output image, Gaussian smoothing is first performed using a series of RecursiveGaussianImageFilter with standard deviation (shrink factor / 2)*imagespacing. The smoothed images are NOT downsampled, in contrast to the superclass's behaviour.
This class is templated over the input image type and the output image type.
This filter uses multithreaded filters to perform the smoothing.
This filter supports streaming.
Definition at line 127 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
Public Types | |
typedef SmartPointer< const Self > | ConstPointer |
typedef Superclass::InputImageConstPointer | InputImageConstPointer |
typedef Superclass::InputImagePointer | InputImagePointer |
typedef Superclass::InputImageType | InputImageType |
typedef Superclass::OutputImagePointer | OutputImagePointer |
typedef Superclass::OutputImageType | OutputImageType |
typedef SmartPointer< Self > | Pointer |
typedef Superclass::ScheduleType | ScheduleType |
typedef MultiResolutionGaussianSmoothingPyramidImageFilter | Self |
typedef MultiResolutionPyramidImageFilter< TInputImage, TOutputImage > | Superclass |
Public Member Functions | |
void | GenerateInputRequestedRegion () override |
void | GenerateOutputInformation () override |
void | GenerateOutputRequestedRegion (DataObject *output) override |
virtual const char * | GetClassName () const |
itkStaticConstMacro (ImageDimension, unsigned int, TInputImage::ImageDimension) | |
itkStaticConstMacro (OutputImageDimension, unsigned int, TOutputImage::ImageDimension) | |
void | SetSchedule (const ScheduleType &schedule) override |
Static Public Member Functions | |
static Pointer | New () |
Protected Member Functions | |
void | EnlargeOutputRequestedRegion (DataObject *output) override |
void | GenerateData () override |
MultiResolutionGaussianSmoothingPyramidImageFilter () | |
void | PrintSelf (std::ostream &os, Indent indent) const override |
~MultiResolutionGaussianSmoothingPyramidImageFilter () override | |
Private Member Functions | |
MultiResolutionGaussianSmoothingPyramidImageFilter (const Self &) | |
void | operator= (const Self &) |
typedef SmartPointer< const Self > itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::ConstPointer |
Definition at line 136 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::InputImageConstPointer itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::InputImageConstPointer |
Definition at line 156 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::InputImagePointer itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::InputImagePointer |
Definition at line 154 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::InputImageType itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::InputImageType |
Definition at line 152 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::OutputImagePointer itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::OutputImagePointer |
Definition at line 155 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::OutputImageType itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::OutputImageType |
Definition at line 153 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef SmartPointer< Self > itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::Pointer |
Definition at line 135 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef Superclass::ScheduleType itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::ScheduleType |
Inherit types from Superclass.
Definition at line 151 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef MultiResolutionGaussianSmoothingPyramidImageFilter itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::Self |
Standard class typedefs.
Definition at line 133 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
typedef MultiResolutionPyramidImageFilter< TInputImage, TOutputImage > itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::Superclass |
Definition at line 134 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
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protected |
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inlineoverrideprotected |
Definition at line 193 of file itkMultiResolutionGaussianSmoothingPyramidImageFilter.h.
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private |
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overrideprotected |
This filter by default generates the largest possible region, because it uses internally a filter that does this.
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overrideprotected |
Generate the output data.
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override |
MultiResolutionGaussianSmoothingPyramidImageFilter requires a larger input requested region than the output requested regions to accomdate the smoothing operations. As such, MultiResolutionGaussianSmoothingPyramidImageFilter needs to provide an implementation for GenerateInputRequestedRegion(). The original documentation of this method is below.
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Set spacing etc.
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Given one output whose requested region has been set, this method sets the requested region for the remaining output images. The original documentation of this method is below.
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virtual |
Run-time type information (and related methods).
Reimplemented in elastix::FixedSmoothingPyramid< TElastix >, and elastix::MovingSmoothingPyramid< TElastix >.
itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::itkStaticConstMacro | ( | ImageDimension | , |
unsigned int | , | ||
TInputImage::ImageDimension | |||
) |
ImageDimension enumeration.
itk::MultiResolutionGaussianSmoothingPyramidImageFilter< TInputImage, TOutputImage >::itkStaticConstMacro | ( | OutputImageDimension | , |
unsigned int | , | ||
TOutputImage::ImageDimension | |||
) |
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static |
Method for creation through the object factory.
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private |
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overrideprotected |
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override |
Set a multi-resolution schedule. The input schedule must have only ImageDimension number of columns and NumberOfLevels number of rows. In contrast to the superclass, any schedule is allowed:
Note that the images are not actually shrunk by this class. They are only smoothed with the same standard deviation gaussian as used by the superclass.
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