itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform > Class Template Reference

#include <itkGPUAdvancedMatrixOffsetTransformBase.h>

Detailed Description

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>
class itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >

GPU version of AdvancedMatrixOffsetTransformBase.

Author

Denis P. Shamonin and Marius Staring. Division of Image Processing, Department of Radiology, Leiden, The Netherlands

Note

This work was funded by the Netherlands Organisation for Scientific Research (NWO NRG-2010.02 and NWO 639.021.124).

Definition at line 39 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

Inheritance diagram for itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef GPUSuperclass::CPUInverseMatrixType	CPUInverseMatrixType
typedef GPUSuperclass::CPUMatrixType	CPUMatrixType
typedef GPUSuperclass::CPUOutputVectorType	CPUOutputVectorType
typedef TParentTransform	CPUSuperclass
typedef GPUMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >	GPUSuperclass
typedef SmartPointer< Self >	Pointer
typedef GPUAdvancedMatrixOffsetTransformBase	Self
Public Types inherited from itk::AdvancedMatrixOffsetTransformBase< float, 3, 3 >
typedef InputPointType	CenterType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::FixedParametersType	FixedParametersType
typedef Superclass::InputCovariantVectorType	InputCovariantVectorType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InputVectorType	InputVectorType
typedef Superclass::InputVnlVectorType	InputVnlVectorType
typedef Superclass::InternalMatrixType	InternalMatrixType
typedef Matrix< float, itkGetStaticConstMacro(InputSpaceDimension), itkGetStaticConstMacro(OutputSpaceDimension) >	InverseMatrixType
typedef Superclass::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef Superclass::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::JacobianType	JacobianType
typedef Matrix< float, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension) >	MatrixType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef Superclass::NumberOfParametersType	NumberOfParametersType
typedef OutputVectorType	OffsetType
typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::OutputVectorType	OutputVectorType
typedef Superclass::OutputVnlVectorType	OutputVnlVectorType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::ScalarType	ScalarType
typedef AdvancedMatrixOffsetTransformBase	Self
typedef Superclass::SpatialHessianType	SpatialHessianType
typedef Superclass::SpatialJacobianType	SpatialJacobianType
typedef AdvancedTransform< float, NInputDimensions, NOutputDimensions >	Superclass
typedef Superclass::TransformCategoryEnum	TransformCategoryEnum
typedef OutputVectorType	TranslationType
Public Types inherited from itk::AdvancedTransform< float, NInputDimensions, NOutputDimensions >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::FixedParametersType	FixedParametersType
typedef Superclass::InputCovariantVectorType	InputCovariantVectorType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InputVectorType	InputVectorType
typedef Superclass::InputVnlVectorType	InputVnlVectorType
typedef SpatialJacobianType::InternalMatrixType	InternalMatrixType
typedef Superclass::InverseTransformBasePointer	InverseTransformBasePointer
typedef Superclass::InverseTransformBaseType	InverseTransformBaseType
typedef std::vector< SpatialHessianType >	JacobianOfSpatialHessianType
typedef std::vector< SpatialJacobianType >	JacobianOfSpatialJacobianType
typedef Superclass::JacobianType	JacobianType
typedef OutputCovariantVectorType	MovingImageGradientType
typedef MovingImageGradientType::ValueType	MovingImageGradientValueType
typedef std::vector< unsigned long >	NonZeroJacobianIndicesType
typedef Superclass::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::OutputVectorType	OutputVectorType
typedef Superclass::OutputVnlVectorType	OutputVnlVectorType
typedef Superclass::ParametersType	ParametersType
typedef Superclass::ParametersValueType	ParametersValueType
typedef SmartPointer< Self >	Pointer
typedef Superclass::ScalarType	ScalarType
typedef AdvancedTransform	Self
typedef FixedArray< Matrix< ScalarType, InputSpaceDimension, InputSpaceDimension >, OutputSpaceDimension >	SpatialHessianType
typedef Matrix< ScalarType, OutputSpaceDimension, InputSpaceDimension >	SpatialJacobianType
typedef Transform< float, NInputDimensions, NOutputDimensions >	Superclass
typedef Transform< float, NInputDimensions, NOutputDimensions >	TransformType
typedef TransformType::ConstPointer	TransformTypeConstPointer
typedef TransformType::Pointer	TransformTypePointer
Public Types inherited from itk::GPUMatrixOffsetTransformBase< float, 3, 3 >
typedef Matrix< float, itkGetStaticConstMacro(InputSpaceDimension), itkGetStaticConstMacro(OutputSpaceDimension) >	CPUInverseMatrixType
typedef Matrix< float, itkGetStaticConstMacro(OutputSpaceDimension), itkGetStaticConstMacro(InputSpaceDimension) >	CPUMatrixType
typedef Vector< float, itkGetStaticConstMacro(OutputSpaceDimension) >	CPUOutputVectorType
typedef GPUTransformBase	GPUSuperclass
typedef float	ScalarType
typedef GPUMatrixOffsetTransformBase	Self
Public Types inherited from itk::GPUTransformBase
typedef GPUTransformBase	Self

Public Member Functions
virtual const char *	GetClassName () const
virtual const CPUInverseMatrixType &	GetCPUInverseMatrix (void) const
virtual const CPUMatrixType &	GetCPUMatrix (void) const
virtual const CPUOutputVectorType &	GetCPUOffset (void) const
Public Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< float, 3, 3 >
void	Compose (const Self *other, bool pre=0)
const InputPointType &	GetCenter (void) const
virtual const char *	GetClassName () const
const FixedParametersType &	GetFixedParameters (void) const override
bool	GetInverse (Self *inverse) const
const InverseMatrixType &	GetInverseMatrix (void) const
void	GetJacobian (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
void	GetJacobianOfSpatialHessian (const InputPointType &, JacobianOfSpatialHessianType &, NonZeroJacobianIndicesType &) const override
void	GetJacobianOfSpatialHessian (const InputPointType &ipp, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &, SpatialJacobianType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
const MatrixType &	GetMatrix (void) const
const OutputVectorType &	GetOffset (void) const
const ParametersType &	GetParameters (void) const override
void	GetSpatialHessian (const InputPointType &, SpatialHessianType &) const override
void	GetSpatialJacobian (const InputPointType &, SpatialJacobianType &) const override
TransformCategoryEnum	GetTransformCategory () const override
const OutputVectorType &	GetTranslation (void) const
bool	IsLinear (void) const override
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
	itkStaticConstMacro (ParametersDimension, unsigned int, NOutputDimensions *(NInputDimensions+1))
void	SetCenter (const InputPointType &center)
void	SetFixedParameters (const FixedParametersType &) override
virtual void	SetIdentity (void)
virtual void	SetMatrix (const MatrixType &matrix)
void	SetOffset (const OutputVectorType &offset)
void	SetParameters (const ParametersType &parameters) override
void	SetTranslation (const OutputVectorType &translation)
OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &vector) const override
OutputPointType	TransformPoint (const InputPointType &point) const override
OutputVectorType	TransformVector (const InputVectorType &vector) const override
OutputVnlVectorType	TransformVector (const InputVnlVectorType &vector) const override
Public Member Functions inherited from itk::AdvancedTransform< float, NInputDimensions, NOutputDimensions >
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override
virtual void	EvaluateJacobianWithImageGradientProduct (const InputPointType &ipp, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
virtual const char *	GetClassName () const
virtual bool	GetHasNonZeroJacobianOfSpatialHessian () const
virtual bool	GetHasNonZeroSpatialHessian () const
virtual void	GetJacobian (const InputPointType &ipp, JacobianType &j, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const=0
virtual void	GetJacobianOfSpatialHessian (const InputPointType &ipp, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const=0
virtual void	GetJacobianOfSpatialHessian (const InputPointType &ipp, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const=0
virtual void	GetJacobianOfSpatialJacobian (const InputPointType &ipp, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const=0
virtual void	GetJacobianOfSpatialJacobian (const InputPointType &ipp, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const=0
virtual NumberOfParametersType	GetNumberOfNonZeroJacobianIndices (void) const
virtual void	GetSpatialHessian (const InputPointType &ipp, SpatialHessianType &sh) const=0
virtual void	GetSpatialJacobian (const InputPointType &ipp, SpatialJacobianType &sj) const=0
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
Public Member Functions inherited from itk::GPUMatrixOffsetTransformBase< float, 3, 3 >
virtual const char *	GetClassName () const
virtual const CPUInverseMatrixType &	GetCPUInverseMatrix (void) const=0
virtual const CPUMatrixType &	GetCPUMatrix (void) const=0
virtual const CPUOutputVectorType &	GetCPUOffset (void) const=0
bool	IsMatrixOffsetTransform (void) const override
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
	itkStaticConstMacro (ParametersDimension, unsigned int, NOutputDimensions *(NInputDimensions+1))
Public Member Functions inherited from itk::GPUTransformBase
virtual const char *	GetNameOfClass () const
virtual GPUDataManager::Pointer	GetParametersDataManager (const std::vcl_size_t index) const
virtual GPUDataManager::Pointer	GetParametersDataManager (void) const
virtual bool	GetSourceCode (std::string &source) const
virtual bool	IsBSplineTransform (void) const
virtual bool	IsIdentityTransform (void) const
virtual bool	IsMatrixOffsetTransform (void) const
virtual bool	IsTranslationTransform (void) const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< float, 3, 3 >
static Pointer	New ()

Protected Member Functions
	GPUAdvancedMatrixOffsetTransformBase ()
virtual	~GPUAdvancedMatrixOffsetTransformBase ()
Protected Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< float, 3, 3 >
	AdvancedMatrixOffsetTransformBase ()
	AdvancedMatrixOffsetTransformBase (const MatrixType &matrix, const OutputVectorType &offset)
	AdvancedMatrixOffsetTransformBase (unsigned int paramDims)
virtual void	ComputeMatrix (void)
virtual void	ComputeMatrixParameters (void)
virtual void	ComputeOffset (void)
virtual void	ComputeTranslation (void)
const InverseMatrixType &	GetVarInverseMatrix (void) const
bool	InverseMatrixIsOld (void) const
virtual void	PrecomputeJacobians (unsigned int paramDims)
void	PrintSelf (std::ostream &s, Indent indent) const override
void	SetVarCenter (const InputPointType &center)
void	SetVarInverseMatrix (const InverseMatrixType &matrix) const
void	SetVarMatrix (const MatrixType &matrix)
void	SetVarOffset (const OutputVectorType &offset)
void	SetVarTranslation (const OutputVectorType &translation)
	~AdvancedMatrixOffsetTransformBase () override
Protected Member Functions inherited from itk::AdvancedTransform< float, NInputDimensions, NOutputDimensions >
	AdvancedTransform ()
	AdvancedTransform (NumberOfParametersType numberOfParameters)
	~AdvancedTransform () override
Protected Member Functions inherited from itk::GPUMatrixOffsetTransformBase< float, 3, 3 >
GPUDataManager::Pointer	GetParametersDataManager (void) const override
bool	GetSourceCode (std::string &source) const override
	GPUMatrixOffsetTransformBase ()
	~GPUMatrixOffsetTransformBase () override
Protected Member Functions inherited from itk::GPUTransformBase
	GPUTransformBase ()
virtual	~GPUTransformBase ()

Private Member Functions
	GPUAdvancedMatrixOffsetTransformBase (const Self &other)
const Self &	operator= (const Self &)

Additional Inherited Members
Protected Attributes inherited from itk::AdvancedMatrixOffsetTransformBase< float, 3, 3 >
JacobianOfSpatialHessianType	m_JacobianOfSpatialHessian
JacobianOfSpatialJacobianType	m_JacobianOfSpatialJacobian
NonZeroJacobianIndicesType	m_NonZeroJacobianIndices
SpatialHessianType	m_SpatialHessian
Protected Attributes inherited from itk::AdvancedTransform< float, NInputDimensions, NOutputDimensions >
bool	m_HasNonZeroJacobianOfSpatialHessian
bool	m_HasNonZeroSpatialHessian
Protected Attributes inherited from itk::GPUTransformBase
GPUDataManager::Pointer	m_ParametersDataManager

Member Typedef Documentation

ConstPointer

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef SmartPointer< const Self > itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::ConstPointer

Definition at line 51 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

CPUInverseMatrixType

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef GPUSuperclass::CPUInverseMatrixType itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::CPUInverseMatrixType

Definition at line 61 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

CPUMatrixType

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef GPUSuperclass::CPUMatrixType itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::CPUMatrixType

Typedefs from GPUSuperclass.

Definition at line 60 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

CPUOutputVectorType

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef GPUSuperclass::CPUOutputVectorType itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::CPUOutputVectorType

Definition at line 62 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

CPUSuperclass

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef TParentTransform itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::CPUSuperclass

Definition at line 47 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

GPUSuperclass

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef GPUMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions > itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GPUSuperclass

Definition at line 49 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

Pointer

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef SmartPointer< Self > itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::Pointer

Definition at line 50 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

Self

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

typedef GPUAdvancedMatrixOffsetTransformBase itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::Self

Standard class typedefs.

Definition at line 46 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

Constructor & Destructor Documentation

GPUAdvancedMatrixOffsetTransformBase() [1/2]

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GPUAdvancedMatrixOffsetTransformBase ( )

inlineprotected

Definition at line 75 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

~GPUAdvancedMatrixOffsetTransformBase()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

virtual itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::~GPUAdvancedMatrixOffsetTransformBase ( )

inlineprotectedvirtual

Definition at line 76 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

GPUAdvancedMatrixOffsetTransformBase() [2/2]

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GPUAdvancedMatrixOffsetTransformBase ( const Self &  other )

private

Member Function Documentation

GetClassName()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

virtual const char * itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::GPUMatrixOffsetTransformBase< float, 3, 3 >.

GetCPUInverseMatrix()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

virtual const CPUInverseMatrixType & itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GetCPUInverseMatrix ( void  ) const

inlinevirtual

Get CPU inverse matrix of an MatrixOffsetTransformBase.

Implements itk::GPUMatrixOffsetTransformBase< float, 3, 3 >.

Definition at line 68 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

GetCPUMatrix()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

virtual const CPUMatrixType & itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GetCPUMatrix ( void  ) const

inlinevirtual

Get CPU matrix of an MatrixOffsetTransformBase.

Implements itk::GPUMatrixOffsetTransformBase< float, 3, 3 >.

Definition at line 65 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

GetCPUOffset()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

virtual const CPUOutputVectorType & itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::GetCPUOffset ( void  ) const

inlinevirtual

Get CPU offset of an MatrixOffsetTransformBase.

Implements itk::GPUMatrixOffsetTransformBase< float, 3, 3 >.

Definition at line 71 of file itkGPUAdvancedMatrixOffsetTransformBase.h.

New()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

static Pointer itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::New ( )

static

Method for creation through the object factory.

operator=()

template<typename TScalarType = float, unsigned int NDimensions = 3, typename TParentTransform = AdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, NDimensions >>

const Self & itk::GPUAdvancedMatrixOffsetTransformBase< TScalarType, NDimensions, TParentTransform >::operator= ( const Self &  )

private