itk::DeformationFieldRegulizer< TAnyITKTransform > Class Template Reference

#include <itkDeformationFieldRegulizer.h>

Detailed Description

template<class TAnyITKTransform>
class itk::DeformationFieldRegulizer< TAnyITKTransform >

This class combines any itk transform with the DeformationFieldTransform.

This class is a base class for Transforms that also use a diffusion / regularization of the deformation field.

Definition at line 41 of file itkDeformationFieldRegulizer.h.

Inheritance diagram for itk::DeformationFieldRegulizer< TAnyITKTransform >:

Public Types
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::InputCovariantVectorType	InputCovariantVectorType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InputVectorType	InputVectorType
typedef Superclass::InputVnlVectorType	InputVnlVectorType
typedef IntermediaryDFTransformType::Pointer	IntermediaryDFTransformPointer
typedef DeformationVectorFieldTransform< ScalarType, itkGetStaticConstMacro(InputSpaceDimension) >	IntermediaryDFTransformType
typedef ImageRegionIterator< VectorImageType >	IteratorType
typedef Superclass::JacobianType	JacobianType
typedef VectorImageType::PointType	OriginType
typedef Superclass::OutputCovariantVectorType	OutputCovariantVectorType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::OutputVectorType	OutputVectorType
typedef Superclass::OutputVnlVectorType	OutputVnlVectorType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef VectorImageType::RegionType	RegionType
typedef Superclass::ScalarType	ScalarType
typedef DeformationFieldRegulizer	Self
typedef VectorImageType::SpacingType	SpacingType
typedef TAnyITKTransform	Superclass
typedef IntermediaryDFTransformType::CoefficientVectorImageType	VectorImageType
typedef VectorImageType::PixelType	VectorPixelType

Public Member Functions
virtual const char *	GetClassName () const
virtual const IntermediaryDFTransformType *	GetIntermediaryDeformationFieldTransform ()
void	InitializeDeformationFields (void)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, Superclass::InputSpaceDimension)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, Superclass::OutputSpaceDimension)
virtual void	SetDeformationFieldOrigin (OriginType _arg)
virtual void	SetDeformationFieldRegion (RegionType _arg)
virtual void	SetDeformationFieldSpacing (SpacingType _arg)
OutputPointType	TransformPoint (const InputPointType &inputPoint) const override
virtual void	UpdateIntermediaryDeformationFieldTransform (typename VectorImageType::Pointer vecImage)

Static Public Member Functions
static Pointer	New ()

Protected Member Functions
	DeformationFieldRegulizer ()
	~DeformationFieldRegulizer () override

Private Member Functions
	DeformationFieldRegulizer (const Self &)
void	operator= (const Self &)

Private Attributes
OriginType	m_DeformationFieldOrigin
RegionType	m_DeformationFieldRegion
SpacingType	m_DeformationFieldSpacing
bool	m_Initialized
IntermediaryDFTransformPointer	m_IntermediaryDeformationFieldTransform

Member Typedef Documentation

ConstPointer

template<class TAnyITKTransform >

typedef SmartPointer< const Self > itk::DeformationFieldRegulizer< TAnyITKTransform >::ConstPointer

Definition at line 50 of file itkDeformationFieldRegulizer.h.

InputCovariantVectorType

template<class TAnyITKTransform >

typedef Superclass::InputCovariantVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::InputCovariantVectorType

Definition at line 69 of file itkDeformationFieldRegulizer.h.

InputPointType

template<class TAnyITKTransform >

typedef Superclass::InputPointType itk::DeformationFieldRegulizer< TAnyITKTransform >::InputPointType

Definition at line 73 of file itkDeformationFieldRegulizer.h.

InputVectorType

template<class TAnyITKTransform >

typedef Superclass::InputVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::InputVectorType

Definition at line 67 of file itkDeformationFieldRegulizer.h.

InputVnlVectorType

template<class TAnyITKTransform >

typedef Superclass::InputVnlVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::InputVnlVectorType

Definition at line 71 of file itkDeformationFieldRegulizer.h.

IntermediaryDFTransformPointer

template<class TAnyITKTransform >

typedef IntermediaryDFTransformType::Pointer itk::DeformationFieldRegulizer< TAnyITKTransform >::IntermediaryDFTransformPointer

Definition at line 80 of file itkDeformationFieldRegulizer.h.

IntermediaryDFTransformType

template<class TAnyITKTransform >

typedef DeformationVectorFieldTransform< ScalarType, itkGetStaticConstMacro( InputSpaceDimension ) > itk::DeformationFieldRegulizer< TAnyITKTransform >::IntermediaryDFTransformType

Typedef's needed in this class.

Definition at line 79 of file itkDeformationFieldRegulizer.h.

IteratorType

template<class TAnyITKTransform >

typedef ImageRegionIterator< VectorImageType > itk::DeformationFieldRegulizer< TAnyITKTransform >::IteratorType

Definition at line 84 of file itkDeformationFieldRegulizer.h.

JacobianType

template<class TAnyITKTransform >

typedef Superclass::JacobianType itk::DeformationFieldRegulizer< TAnyITKTransform >::JacobianType

Definition at line 66 of file itkDeformationFieldRegulizer.h.

OriginType

template<class TAnyITKTransform >

typedef VectorImageType::PointType itk::DeformationFieldRegulizer< TAnyITKTransform >::OriginType

Definition at line 89 of file itkDeformationFieldRegulizer.h.

OutputCovariantVectorType

template<class TAnyITKTransform >

typedef Superclass::OutputCovariantVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::OutputCovariantVectorType

Definition at line 70 of file itkDeformationFieldRegulizer.h.

OutputPointType

template<class TAnyITKTransform >

typedef Superclass::OutputPointType itk::DeformationFieldRegulizer< TAnyITKTransform >::OutputPointType

Definition at line 74 of file itkDeformationFieldRegulizer.h.

OutputVectorType

template<class TAnyITKTransform >

typedef Superclass::OutputVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::OutputVectorType

Definition at line 68 of file itkDeformationFieldRegulizer.h.

OutputVnlVectorType

template<class TAnyITKTransform >

typedef Superclass::OutputVnlVectorType itk::DeformationFieldRegulizer< TAnyITKTransform >::OutputVnlVectorType

Definition at line 72 of file itkDeformationFieldRegulizer.h.

ParametersType

template<class TAnyITKTransform >

typedef Superclass::ParametersType itk::DeformationFieldRegulizer< TAnyITKTransform >::ParametersType

Definition at line 65 of file itkDeformationFieldRegulizer.h.

Pointer

template<class TAnyITKTransform >

typedef SmartPointer< Self > itk::DeformationFieldRegulizer< TAnyITKTransform >::Pointer

Definition at line 49 of file itkDeformationFieldRegulizer.h.

RegionType

template<class TAnyITKTransform >

typedef VectorImageType::RegionType itk::DeformationFieldRegulizer< TAnyITKTransform >::RegionType

Typedef's for the vectorImage.

Definition at line 87 of file itkDeformationFieldRegulizer.h.

ScalarType

template<class TAnyITKTransform >

typedef Superclass::ScalarType itk::DeformationFieldRegulizer< TAnyITKTransform >::ScalarType

Typedef's inherited from Superclass.

Definition at line 64 of file itkDeformationFieldRegulizer.h.

Self

template<class TAnyITKTransform >

typedef DeformationFieldRegulizer itk::DeformationFieldRegulizer< TAnyITKTransform >::Self

Standard itk.

Definition at line 47 of file itkDeformationFieldRegulizer.h.

SpacingType

template<class TAnyITKTransform >

typedef VectorImageType::SpacingType itk::DeformationFieldRegulizer< TAnyITKTransform >::SpacingType

Definition at line 88 of file itkDeformationFieldRegulizer.h.

Superclass

template<class TAnyITKTransform >

typedef TAnyITKTransform itk::DeformationFieldRegulizer< TAnyITKTransform >::Superclass

Definition at line 48 of file itkDeformationFieldRegulizer.h.

VectorImageType

template<class TAnyITKTransform >

typedef IntermediaryDFTransformType::CoefficientVectorImageType itk::DeformationFieldRegulizer< TAnyITKTransform >::VectorImageType

Definition at line 82 of file itkDeformationFieldRegulizer.h.

VectorPixelType

template<class TAnyITKTransform >

typedef VectorImageType::PixelType itk::DeformationFieldRegulizer< TAnyITKTransform >::VectorPixelType

Definition at line 83 of file itkDeformationFieldRegulizer.h.

Constructor & Destructor Documentation

DeformationFieldRegulizer() [1/2]

template<class TAnyITKTransform >

itk::DeformationFieldRegulizer< TAnyITKTransform >::DeformationFieldRegulizer ( )

protected

The constructor.

~DeformationFieldRegulizer()

template<class TAnyITKTransform >

itk::DeformationFieldRegulizer< TAnyITKTransform >::~DeformationFieldRegulizer ( )

inlineoverrideprotected

The destructor.

Definition at line 120 of file itkDeformationFieldRegulizer.h.

DeformationFieldRegulizer() [2/2]

template<class TAnyITKTransform >

itk::DeformationFieldRegulizer< TAnyITKTransform >::DeformationFieldRegulizer ( const Self &  )

private

The private constructor.

Member Function Documentation

GetClassName()

template<class TAnyITKTransform >

virtual const char * itk::DeformationFieldRegulizer< TAnyITKTransform >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented in elastix::BSplineTransformWithDiffusion< TElastix >.

GetIntermediaryDeformationFieldTransform()

template<class TAnyITKTransform >

virtual const IntermediaryDFTransformType * itk::DeformationFieldRegulizer< TAnyITKTransform >::GetIntermediaryDeformationFieldTransform ( )

virtual

itk Get macro for the deformation field transform.

InitializeDeformationFields()

template<class TAnyITKTransform >

void itk::DeformationFieldRegulizer< TAnyITKTransform >::InitializeDeformationFields

(

void

)

Function to create and initialze the deformation fields.

itkStaticConstMacro() [1/2]

template<class TAnyITKTransform >

itk::DeformationFieldRegulizer< TAnyITKTransform >::itkStaticConstMacro	(	InputSpaceDimension	,
		unsigned int	,
		Superclass::InputSpaceDimension
	)

Input space dimension.

itkStaticConstMacro() [2/2]

template<class TAnyITKTransform >

itk::DeformationFieldRegulizer< TAnyITKTransform >::itkStaticConstMacro	(	OutputSpaceDimension	,
		unsigned int	,
		Superclass::OutputSpaceDimension
	)

Output space dimension.

New()

template<class TAnyITKTransform >

static Pointer itk::DeformationFieldRegulizer< TAnyITKTransform >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TAnyITKTransform >

void itk::DeformationFieldRegulizer< TAnyITKTransform >::operator= ( const Self &  )

private

The private copy constructor.

SetDeformationFieldOrigin()

template<class TAnyITKTransform >

virtual void itk::DeformationFieldRegulizer< TAnyITKTransform >::SetDeformationFieldOrigin ( OriginType  _arg )

virtual

itk Set macro for the origin of the deformation field.

SetDeformationFieldRegion()

template<class TAnyITKTransform >

virtual void itk::DeformationFieldRegulizer< TAnyITKTransform >::SetDeformationFieldRegion ( RegionType  _arg )

virtual

itk Set macro for the region of the deformation field.

SetDeformationFieldSpacing()

template<class TAnyITKTransform >

virtual void itk::DeformationFieldRegulizer< TAnyITKTransform >::SetDeformationFieldSpacing ( SpacingType  _arg )

virtual

itk Set macro for the spacing of the deformation field.

TransformPoint()

template<class TAnyITKTransform >

OutputPointType itk::DeformationFieldRegulizer< TAnyITKTransform >::TransformPoint ( const InputPointType &  inputPoint ) const

override

Method to transform a point.

UpdateIntermediaryDeformationFieldTransform()

template<class TAnyITKTransform >

virtual void itk::DeformationFieldRegulizer< TAnyITKTransform >::UpdateIntermediaryDeformationFieldTransform ( typename VectorImageType::Pointer  vecImage )

virtual

Function to update the intermediary deformation field by adding a diffused deformation field to it.

Field Documentation

m_DeformationFieldOrigin

template<class TAnyITKTransform >

OriginType itk::DeformationFieldRegulizer< TAnyITKTransform >::m_DeformationFieldOrigin

private

Definition at line 135 of file itkDeformationFieldRegulizer.h.

m_DeformationFieldRegion

template<class TAnyITKTransform >

RegionType itk::DeformationFieldRegulizer< TAnyITKTransform >::m_DeformationFieldRegion

private

Declarations of region things.

Definition at line 134 of file itkDeformationFieldRegulizer.h.

m_DeformationFieldSpacing

template<class TAnyITKTransform >

SpacingType itk::DeformationFieldRegulizer< TAnyITKTransform >::m_DeformationFieldSpacing

private

Definition at line 136 of file itkDeformationFieldRegulizer.h.

m_Initialized

template<class TAnyITKTransform >

bool itk::DeformationFieldRegulizer< TAnyITKTransform >::m_Initialized

private

Definition at line 131 of file itkDeformationFieldRegulizer.h.

m_IntermediaryDeformationFieldTransform

template<class TAnyITKTransform >

IntermediaryDFTransformPointer itk::DeformationFieldRegulizer< TAnyITKTransform >::m_IntermediaryDeformationFieldTransform

private

Declaration of members.

Definition at line 130 of file itkDeformationFieldRegulizer.h.