#include <elxVarianceOverLastDimensionMetric.h>

Detailed Description

template<class TElastix>
class elastix::VarianceOverLastDimensionMetric< TElastix >

Compute the sum of variances over the slowest varying dimension in the moving image.

For a description of this metric see the paper:
Nonrigid registration of dynamic medical imaging data using nD+t B-splines and a groupwise optimization approach, C.T. Metz, S. Klein, M. Schaap, T. van Walsum and W.J. Niessen, Medical Image Analysis, in press.

This metric is based on the AdvancedImageToImageMetric. It is templated over the type of the fixed and moving images to be compared.

This metric computes the sum of variances over the slowest varying dimension in the moving image. The spatial positions of the moving image are established through a Transform. Pixel values are taken from the Moving image.

This implementation is based on the AdvancedImageToImageMetric, which means that:

It uses the ImageSampler-framework
It makes use of the compact support of B-splines, in case of B-spline transforms.
Image derivatives are computed using either the B-spline interpolator's implementation or by nearest neighbor interpolation of a precomputed central difference image.
A minimum number of samples that should map within the moving image (mask) can be specified.

Parameters:

SampleLastDimensionRandomly: randomly sample a number of time points to to compute the variance from. When set to "false", all time points are taken into account. When set to "true", a random number of time points is selected, which can be set with parameter NumSamplesLastDimension.

NumSamplesLastDimension: the number of random samples to take in the time time direction of the data when SampleLastDimensionRandomly is set to true.

SubtractMean: subtract the over time computed mean parameter value from each parameter. This should be used when registration is performed directly on the moving image, without using a fixed image. Possible values are "true" or "false".

Definition at line 67 of file elxVarianceOverLastDimensionMetric.h.

Inheritance diagram for elastix::VarianceOverLastDimensionMetric< TElastix >:

Public Types
typedef itk::AdvancedBSplineDeformableTransformBase< ScalarType, FixedImageDimension >	BSplineTransformBaseType

typedef itk::AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType

typedef Superclass2::ConfigurationPointer	ConfigurationPointer

typedef Superclass2::ConfigurationType	ConfigurationType

typedef itk::SmartPointer< const Self >	ConstPointer

typedef Superclass1::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass1::DerivativeType	DerivativeType

typedef Superclass2::ElastixPointer	ElastixPointer

typedef Superclass2::ElastixType	ElastixType

typedef Superclass1::FixedImageConstPointer	FixedImageConstPointer

typedef Superclass1::FixedImageLimiterOutputType	FixedImageLimiterOutputType

typedef Superclass1::FixedImageLimiterType	FixedImageLimiterType

typedef Superclass1::FixedImageMaskPointer	FixedImageMaskPointer

typedef Superclass1::FixedImageMaskType	FixedImageMaskType

typedef Superclass1::FixedImagePixelType	FixedImagePixelType

typedef Superclass1::FixedImageRegionType	FixedImageRegionType

typedef Superclass1::FixedImageSizeType	FixedImageSizeType

typedef Superclass1::FixedImageType	FixedImageType

typedef Superclass1::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass1::GradientImageFilterType	GradientImageFilterType

typedef Superclass1::GradientImagePointer	GradientImagePointer

typedef Superclass1::GradientImageType	GradientImageType

typedef Superclass1::GradientPixelType	GradientPixelType

typedef Superclass1::ImageSampleContainerPointer	ImageSampleContainerPointer

typedef Superclass1::ImageSampleContainerType	ImageSampleContainerType

typedef Superclass1::ImageSamplerPointer	ImageSamplerPointer

typedef Superclass1::ImageSamplerType	ImageSamplerType

typedef Superclass1::InputPointType	InputPointType

typedef Superclass1::InterpolatorPointer	InterpolatorPointer

typedef Superclass1::InterpolatorType	InterpolatorType

typedef Superclass2::ITKBaseType	ITKBaseType

typedef Superclass1::MeasureType	MeasureType

typedef Superclass1::MovingImageConstPointer	MovingImageConstPointer

typedef Superclass1::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType

typedef Superclass1::MovingImageLimiterOutputType	MovingImageLimiterOutputType

typedef Superclass1::MovingImageLimiterType	MovingImageLimiterType

typedef Superclass1::MovingImageMaskPointer	MovingImageMaskPointer

typedef Superclass1::MovingImageMaskType	MovingImageMaskType

typedef Superclass1::MovingImagePixelType	MovingImagePixelType

typedef Superclass1::MovingImageRegionType	MovingImageRegionType

typedef Superclass1::MovingImageType	MovingImageType

typedef Superclass1::OutputPointType	OutputPointType

typedef Superclass1::ParametersType	ParametersType

typedef itk::SmartPointer< Self >	Pointer

typedef Superclass1::RealType	RealType

typedef itk::AdvancedBSplineDeformableTransformBase< ScalarType, FixedImageDimension - 1 >	ReducedDimensionBSplineTransformBaseType

typedef Superclass2::RegistrationPointer	RegistrationPointer

typedef Superclass2::RegistrationType	RegistrationType

typedef Superclass1::ScalarType	ScalarType

typedef VarianceOverLastDimensionMetric	Self

typedef itk::StackTransform< ScalarType, FixedImageDimension, MovingImageDimension >	StackTransformType

typedef itk::VarianceOverLastDimensionImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType >	Superclass1

typedef MetricBase< TElastix >	Superclass2

typedef Superclass1::TransformJacobianType	TransformJacobianType

typedef Superclass1::TransformParametersType	TransformParametersType

typedef Superclass1::TransformPointer	TransformPointer

typedef Superclass1::TransformType	TransformType

Public Types inherited from itk::VarianceOverLastDimensionImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass::DerivativeType	DerivativeType

typedef Superclass::FixedImageConstPointer	FixedImageConstPointer

typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType

typedef Superclass::FixedImageLimiterType	FixedImageLimiterType

typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer

typedef Superclass::FixedImageMaskType	FixedImageMaskType

typedef Superclass::FixedImagePixelType	FixedImagePixelType

typedef Superclass::FixedImageRegionType	FixedImageRegionType

typedef FixedImageRegionType::SizeType	FixedImageSizeType

typedef Superclass::FixedImageType	FixedImageType

typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass::GradientImageFilterType	GradientImageFilterType

typedef Superclass::GradientImagePointer	GradientImagePointer

typedef Superclass::GradientImageType	GradientImageType

typedef Superclass::GradientPixelType	GradientPixelType

typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer

typedef Superclass::ImageSampleContainerType	ImageSampleContainerType

typedef Superclass::ImageSamplerPointer	ImageSamplerPointer

typedef Superclass::ImageSamplerType	ImageSamplerType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InterpolatorPointer	InterpolatorPointer

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::MovingImageConstPointer	MovingImageConstPointer

typedef Superclass::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType

typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType

typedef Superclass::MovingImageLimiterType	MovingImageLimiterType

typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer

typedef Superclass::MovingImageMaskType	MovingImageMaskType

typedef Superclass::MovingImagePixelType	MovingImagePixelType

typedef Superclass::MovingImageRegionType	MovingImageRegionType

typedef Superclass::MovingImageType	MovingImageType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::ParametersType	ParametersType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef VarianceOverLastDimensionImageMetric	Self

typedef AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass

typedef Superclass::TransformJacobianType	TransformJacobianType

typedef Superclass::TransformParametersType	TransformParametersType

typedef Superclass::TransformPointer	TransformPointer

typedef Superclass::TransformType	TransformType

Public Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType

typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType

typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType

typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer

typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType

typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType

typedef SmartPointer< const Self >	ConstPointer

typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType

typedef Superclass::DerivativeType	DerivativeType

typedef DerivativeType::ValueType	DerivativeValueType

typedef Superclass::FixedImageConstPointer	FixedImageConstPointer

typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType

typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer

typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType

typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer

typedef ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedImageMaskSpatialObject2Type

typedef Superclass::FixedImageMaskType	FixedImageMaskType

typedef FixedImageType::PixelType	FixedImagePixelType

typedef FixedImageType::Pointer	FixedImagePointer

typedef Superclass::FixedImageRegionType	FixedImageRegionType

typedef Superclass::FixedImageType	FixedImageType

typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer

typedef Superclass::GradientImageFilterType	GradientImageFilterType

typedef Superclass::GradientImagePointer	GradientImagePointer

typedef Superclass::GradientImageType	GradientImageType

typedef Superclass::GradientPixelType	GradientPixelType

typedef vnl_sparse_matrix< HessianValueType >	HessianType

typedef DerivativeType::ValueType	HessianValueType

typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer

typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType

typedef ImageSamplerType::Pointer	ImageSamplerPointer

typedef ImageSamplerBase< FixedImageType >	ImageSamplerType

typedef Superclass::InputPointType	InputPointType

typedef Superclass::InterpolatorPointer	InterpolatorPointer

typedef Superclass::InterpolatorType	InterpolatorType

typedef Superclass::MeasureType	MeasureType

typedef Superclass::MovingImageConstPointer	MovingImageConstPointer

typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType

typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType

typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer

typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType

typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer

typedef ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingImageMaskSpatialObject2Type

typedef Superclass::MovingImageMaskType	MovingImageMaskType

typedef Superclass::MovingImagePixelType	MovingImagePixelType

typedef MovingImageType::Pointer	MovingImagePointer

typedef MovingImageType::RegionType	MovingImageRegionType

typedef Superclass::MovingImageType	MovingImageType

typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType

typedef Superclass::OutputPointType	OutputPointType

typedef Superclass::ParametersType	ParametersType

typedef SmartPointer< Self >	Pointer

typedef Superclass::RealType	RealType

typedef TransformType::ScalarType	ScalarType

typedef AdvancedImageToImageMetric	Self

typedef ImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass

typedef itk::PlatformMultiThreader	ThreaderType

typedef ThreaderType::WorkUnitInfo	ThreadInfoType

typedef Superclass::TransformJacobianType	TransformJacobianType

typedef Superclass::TransformParametersType	TransformParametersType

typedef Superclass::TransformPointer	TransformPointer

typedef Superclass::TransformType	TransformType

Public Types inherited from elastix::MetricBase< TElastix >
typedef itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >	AdvancedMetricType

typedef Superclass::ConfigurationPointer	ConfigurationPointer

typedef Superclass::ConfigurationType	ConfigurationType

typedef ITKBaseType::ParametersValueType	CoordinateRepresentationType

typedef Superclass::ElastixPointer	ElastixPointer

typedef Superclass::ElastixType	ElastixType

typedef ElastixType::FixedImageType	FixedImageType

typedef itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	FixedPointSetType

typedef FixedImageType::PointType	FixedPointType

typedef FixedPointType::ValueType	FixedPointValueType

typedef AdvancedMetricType::ImageSamplerType	ImageSamplerBaseType

typedef itk::SingleValuedCostFunction	ITKBaseType

typedef ITKBaseType::MeasureType	MeasureType

typedef AdvancedMetricType::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType

typedef ElastixType::MovingImageType	MovingImageType

typedef itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	MovingPointSetType

typedef MovingImageType::PointType	MovingPointType

typedef MovingPointType::ValueType	MovingPointValueType

typedef Superclass::RegistrationPointer	RegistrationPointer

typedef Superclass::RegistrationType	RegistrationType

typedef MetricBase	Self

typedef BaseComponentSE< TElastix >	Superclass

Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef Configuration::Pointer	ConfigurationPointer

typedef Configuration	ConfigurationType

typedef itk::WeakPointer< ElastixType >	ElastixPointer

typedef TElastix	ElastixType

typedef RegistrationType *	RegistrationPointer

typedef ElastixType::RegistrationBaseType	RegistrationType

typedef BaseComponentSE	Self

typedef BaseComponent	Superclass

Public Member Functions
void	BeforeEachResolution (void) override

void	BeforeRegistration (void) override

	elxClassNameMacro ("VarianceOverLastDimensionMetric")

virtual const char *	GetClassName () const

void	Initialize (void) override

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

Public Member Functions inherited from itk::VarianceOverLastDimensionImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual const char *	GetClassName () const

void	GetDerivative (const TransformParametersType &parameters, DerivativeType &derivative) const override

virtual int	GetNumSamplesLastDimension () const

virtual bool	GetSampleLastDimensionRandomly () const

MeasureType	GetValue (const TransformParametersType &parameters) const override

void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const override

void	Initialize (void) override

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

virtual void	SetGridSize (FixedImageSizeType _arg)

virtual void	SetNumAdditionalSamplesFixed (unsigned int _arg)

virtual void	SetNumSamplesLastDimension (unsigned int _arg)

virtual void	SetReducedDimensionIndex (unsigned int _arg)

virtual void	SetSampleLastDimensionRandomly (bool _arg)

virtual void	SetSubtractMean (bool _arg)

virtual void	SetTransformIsStackTransform (bool _arg)

Public Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const

virtual const char *	GetClassName () const

virtual const FixedImageLimiterType *	GetFixedImageLimiter ()

virtual double	GetFixedLimitRangeRatio () const

virtual ImageSamplerType *	GetImageSampler (void) const

virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()

virtual const MovingImageLimiterType *	GetMovingImageLimiter ()

virtual double	GetMovingLimitRangeRatio () const

virtual double	GetRequiredRatioOfValidSamples () const

virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const

virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const

const AdvancedTransformType *	GetTransform (void) const override

virtual bool	GetUseFixedImageLimiter () const

virtual bool	GetUseImageSampler () const

virtual const bool &	GetUseMetricSingleThreaded ()

virtual bool	GetUseMovingImageDerivativeScales () const

virtual bool	GetUseMovingImageLimiter () const

virtual const bool &	GetUseMultiThread ()

void	Initialize (void) override

	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)

virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)

virtual void	SetFixedLimitRangeRatio (double _arg)

virtual void	SetImageSampler (ImageSamplerType *_arg)

virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)

virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)

virtual void	SetMovingLimitRangeRatio (double _arg)

virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)

virtual void	SetRequiredRatioOfValidSamples (double _arg)

virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)

virtual void	SetTransform (AdvancedTransformType *arg)

virtual void	SetUseMetricSingleThreaded (bool _arg)

virtual void	SetUseMovingImageDerivativeScales (bool _arg)

virtual void	SetUseMultiThread (bool _arg)

virtual void	UseMetricSingleThreadedOff ()

virtual void	UseMetricSingleThreadedOn ()

virtual void	UseMultiThreadOff ()

virtual void	UseMultiThreadOn ()

Public Member Functions inherited from elastix::MetricBase< TElastix >
void	AfterEachIterationBase (void) override

void	BeforeEachResolutionBase (void) override

virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler (void) const

virtual bool	GetAdvancedMetricUseImageSampler (void) const

virtual ITKBaseType *	GetAsITKBaseType (void)

virtual const ITKBaseType *	GetAsITKBaseType (void) const

virtual const char *	GetClassName () const

virtual MeasureType	GetCurrentExactMetricValue (void) const

virtual bool	GetShowExactMetricValue (void) const

	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)

	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)

virtual void	SelectNewSamples (void)

virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)

Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
ConfigurationType *	GetConfiguration (void) const

ElastixType *	GetElastix (void) const

RegistrationPointer	GetRegistration (void) const

	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponentSE)

void	SetConfiguration (ConfigurationType *_arg)

void	SetElastix (ElastixType *_arg)

Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)

virtual void	AfterEachIterationBase (void)

virtual void	AfterEachResolution (void)

virtual void	AfterEachResolutionBase (void)

virtual void	AfterRegistration (void)

virtual void	AfterRegistrationBase (void)

virtual int	BeforeAll (void)

virtual int	BeforeAllBase (void)

virtual void	BeforeEachResolution (void)

virtual void	BeforeEachResolutionBase (void)

virtual void	BeforeRegistration (void)

virtual void	BeforeRegistrationBase (void)

virtual const char *	elxGetClassName (void) const

const char *	GetComponentLabel (void) const

	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponent)

	itkTypeMacroNoParent (BaseComponent)

void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()

Static Public Member Functions inherited from itk::VarianceOverLastDimensionImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static Pointer	New ()

Static Public Member Functions inherited from elastix::BaseComponent
static std::string	ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision)

static void	InitializeElastixExecutable ()

static bool	IsElastixLibrary ()

Protected Member Functions
	VarianceOverLastDimensionMetric ()

	~VarianceOverLastDimensionMetric () override

Protected Member Functions inherited from itk::VarianceOverLastDimensionImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const override

void	PrintSelf (std::ostream &os, Indent indent) const override

	VarianceOverLastDimensionImageMetric ()

	~VarianceOverLastDimensionImageMetric () override

Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
	AdvancedImageToImageMetric ()

virtual void	AfterThreadedGetValue (MeasureType &value) const

virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const

virtual void	CheckForAdvancedTransform (void)

virtual void	CheckForBSplineInterpolator (void)

virtual void	CheckForBSplineTransform (void) const

virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const

virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const

virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const

virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const

virtual void	InitializeImageSampler (void)

virtual void	InitializeLimiters (void)

virtual void	InitializeThreadingParameters (void) const

virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)

	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)

	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)

void	LaunchGetValueAndDerivativeThreaderCallback (void) const

void	LaunchGetValueThreaderCallback (void) const

void	PrintSelf (std::ostream &os, Indent indent) const override

virtual void	SetUseFixedImageLimiter (bool _arg)

virtual void	SetUseImageSampler (bool _arg)

virtual void	SetUseMovingImageLimiter (bool _arg)

virtual void	ThreadedGetValue (ThreadIdType threadID)

virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)

virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const

	~AdvancedImageToImageMetric () override

Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)

	MetricBase ()

	~MetricBase () override

Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default

	~BaseComponentSE () override=default

Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default

virtual	~BaseComponent ()=default

Private Member Functions
void	operator= (const Self &)

	VarianceOverLastDimensionMetric (const Self &)

Additional Inherited Members
Protected Types inherited from itk::VarianceOverLastDimensionImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType

typedef Superclass::CentralDifferenceGradientFilterType	CentralDifferenceGradientFilterType

typedef itk::ContinuousIndex< CoordinateRepresentationType, FixedImageDimension >	FixedImageContinuousIndexType

typedef Superclass::FixedImageIndexType	FixedImageIndexType

typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType

typedef Superclass::FixedImagePointType	FixedImagePointType

typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType

typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType

typedef Superclass::MovingImageIndexType	MovingImageIndexType

typedef Superclass::MovingImagePointType	MovingImagePointType

typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType

Protected Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer

typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType

typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer

typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType

typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer

typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType

typedef FixedImageType::IndexType	FixedImageIndexType

typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType

typedef TransformType::InputPointType	FixedImagePointType

typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer

typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType

typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType

typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType

typedef MovingImageType::IndexType	MovingImageIndexType

typedef TransformType::OutputPointType	MovingImagePointType

typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType

typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer

typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType

Protected Types inherited from elastix::MetricBase< TElastix >
typedef ExactMetricImageSamplerType::Pointer	ExactMetricImageSamplerPointer

typedef itk::ImageGridSampler< FixedImageType >	ExactMetricImageSamplerType

typedef ExactMetricImageSamplerType::SampleGridSpacingType	ExactMetricSampleGridSpacingType

typedef ITKBaseType::ParametersType	ParametersType

Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)

static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)

Protected Attributes inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
AdvancedTransformType::Pointer	m_AdvancedTransform

BSplineInterpolatorPointer	m_BSplineInterpolator

BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat

CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter

FixedImageLimiterPointer	m_FixedImageLimiter

FixedImageLimiterOutputType	m_FixedImageMaxLimit

FixedImageLimiterOutputType	m_FixedImageMinLimit

FixedImagePixelType	m_FixedImageTrueMax

FixedImagePixelType	m_FixedImageTrueMin

double	m_FixedLimitRangeRatio

AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables

ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize

AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables

ThreadIdType	m_GetValuePerThreadVariablesSize

ImageSamplerPointer	m_ImageSampler

bool	m_InterpolatorIsBSpline

bool	m_InterpolatorIsBSplineFloat

bool	m_InterpolatorIsLinear

bool	m_InterpolatorIsReducedBSpline

LinearInterpolatorPointer	m_LinearInterpolator

MovingImageLimiterPointer	m_MovingImageLimiter

MovingImageLimiterOutputType	m_MovingImageMaxLimit

MovingImageLimiterOutputType	m_MovingImageMinLimit

MovingImagePixelType	m_MovingImageTrueMax

MovingImagePixelType	m_MovingImageTrueMin

double	m_MovingLimitRangeRatio

ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator

MultiThreaderParameterType	m_ThreaderMetricParameters

bool	m_TransformIsAdvanced

bool	m_TransformIsBSpline

bool	m_UseMetricSingleThreaded

bool	m_UseMultiThread

bool	m_UseOpenMP

Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue

unsigned int	m_ExactMetricEachXNumberOfIterations

ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing

ExactMetricImageSamplerPointer	m_ExactMetricSampler

bool	m_ShowExactMetricValue

Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration {}

ElastixPointer	m_Elastix {}

RegistrationPointer	m_Registration {}

Member Typedef Documentation

◆ BSplineTransformBaseType

template<class TElastix >

typedef itk::AdvancedBSplineDeformableTransformBase< ScalarType, FixedImageDimension > elastix::VarianceOverLastDimensionMetric< TElastix >::BSplineTransformBaseType

Typedef's for the B-spline transform.

Definition at line 164 of file elxVarianceOverLastDimensionMetric.h.

◆ CombinationTransformType

template<class TElastix >

typedef itk::AdvancedCombinationTransform< ScalarType, FixedImageDimension > elastix::VarianceOverLastDimensionMetric< TElastix >::CombinationTransformType

Definition at line 166 of file elxVarianceOverLastDimensionMetric.h.

◆ ConfigurationPointer

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::VarianceOverLastDimensionMetric< TElastix >::ConfigurationPointer

Definition at line 157 of file elxVarianceOverLastDimensionMetric.h.

◆ ConfigurationType

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::VarianceOverLastDimensionMetric< TElastix >::ConfigurationType

Definition at line 156 of file elxVarianceOverLastDimensionMetric.h.

◆ ConstPointer

template<class TElastix >

typedef itk::SmartPointer< const Self > elastix::VarianceOverLastDimensionMetric< TElastix >::ConstPointer

Definition at line 83 of file elxVarianceOverLastDimensionMetric.h.

◆ CoordinateRepresentationType

template<class TElastix >

typedef Superclass1::CoordinateRepresentationType elastix::VarianceOverLastDimensionMetric< TElastix >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 99 of file elxVarianceOverLastDimensionMetric.h.

◆ DerivativeType

template<class TElastix >

typedef Superclass1::DerivativeType elastix::VarianceOverLastDimensionMetric< TElastix >::DerivativeType

Definition at line 127 of file elxVarianceOverLastDimensionMetric.h.

◆ ElastixPointer

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::VarianceOverLastDimensionMetric< TElastix >::ElastixPointer

Definition at line 155 of file elxVarianceOverLastDimensionMetric.h.

◆ ElastixType

template<class TElastix >

typedef Superclass2::ElastixType elastix::VarianceOverLastDimensionMetric< TElastix >::ElastixType

Typedef's inherited from Elastix.

Definition at line 154 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageConstPointer

template<class TElastix >

typedef Superclass1::FixedImageConstPointer elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageConstPointer

Definition at line 105 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageLimiterOutputType

template<class TElastix >

typedef Superclass1::FixedImageLimiterOutputType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageLimiterOutputType

Definition at line 139 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageLimiterType

template<class TElastix >

typedef Superclass1::FixedImageLimiterType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageLimiterType

Definition at line 136 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageMaskPointer

template<class TElastix >

typedef Superclass1::FixedImageMaskPointer elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageMaskPointer

Definition at line 123 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageMaskType

template<class TElastix >

typedef Superclass1::FixedImageMaskType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageMaskType

Definition at line 122 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImagePixelType

template<class TElastix >

typedef Superclass1::FixedImagePixelType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImagePixelType

Definition at line 129 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageRegionType

template<class TElastix >

typedef Superclass1::FixedImageRegionType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageRegionType

Definition at line 106 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageSizeType

template<class TElastix >

typedef Superclass1::FixedImageSizeType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageSizeType

Definition at line 107 of file elxVarianceOverLastDimensionMetric.h.

◆ FixedImageType

template<class TElastix >

typedef Superclass1::FixedImageType elastix::VarianceOverLastDimensionMetric< TElastix >::FixedImageType

Definition at line 104 of file elxVarianceOverLastDimensionMetric.h.

◆ GradientImageFilterPointer

template<class TElastix >

typedef Superclass1::GradientImageFilterPointer elastix::VarianceOverLastDimensionMetric< TElastix >::GradientImageFilterPointer

Definition at line 121 of file elxVarianceOverLastDimensionMetric.h.

◆ GradientImageFilterType

template<class TElastix >

typedef Superclass1::GradientImageFilterType elastix::VarianceOverLastDimensionMetric< TElastix >::GradientImageFilterType

Definition at line 120 of file elxVarianceOverLastDimensionMetric.h.

◆ GradientImagePointer

template<class TElastix >

typedef Superclass1::GradientImagePointer elastix::VarianceOverLastDimensionMetric< TElastix >::GradientImagePointer

Definition at line 119 of file elxVarianceOverLastDimensionMetric.h.

◆ GradientImageType

template<class TElastix >

typedef Superclass1::GradientImageType elastix::VarianceOverLastDimensionMetric< TElastix >::GradientImageType

Definition at line 118 of file elxVarianceOverLastDimensionMetric.h.

◆ GradientPixelType

template<class TElastix >

typedef Superclass1::GradientPixelType elastix::VarianceOverLastDimensionMetric< TElastix >::GradientPixelType

Definition at line 117 of file elxVarianceOverLastDimensionMetric.h.

◆ ImageSampleContainerPointer

template<class TElastix >

typedef Superclass1::ImageSampleContainerPointer elastix::VarianceOverLastDimensionMetric< TElastix >::ImageSampleContainerPointer

Definition at line 135 of file elxVarianceOverLastDimensionMetric.h.

◆ ImageSampleContainerType

template<class TElastix >

typedef Superclass1::ImageSampleContainerType elastix::VarianceOverLastDimensionMetric< TElastix >::ImageSampleContainerType

Definition at line 133 of file elxVarianceOverLastDimensionMetric.h.

◆ ImageSamplerPointer

template<class TElastix >

typedef Superclass1::ImageSamplerPointer elastix::VarianceOverLastDimensionMetric< TElastix >::ImageSamplerPointer

Definition at line 132 of file elxVarianceOverLastDimensionMetric.h.

◆ ImageSamplerType

template<class TElastix >

typedef Superclass1::ImageSamplerType elastix::VarianceOverLastDimensionMetric< TElastix >::ImageSamplerType

Definition at line 131 of file elxVarianceOverLastDimensionMetric.h.

◆ InputPointType

template<class TElastix >

typedef Superclass1::InputPointType elastix::VarianceOverLastDimensionMetric< TElastix >::InputPointType

Definition at line 110 of file elxVarianceOverLastDimensionMetric.h.

◆ InterpolatorPointer

template<class TElastix >

typedef Superclass1::InterpolatorPointer elastix::VarianceOverLastDimensionMetric< TElastix >::InterpolatorPointer

Definition at line 115 of file elxVarianceOverLastDimensionMetric.h.

◆ InterpolatorType

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::VarianceOverLastDimensionMetric< TElastix >::InterpolatorType

Definition at line 114 of file elxVarianceOverLastDimensionMetric.h.

◆ ITKBaseType

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::VarianceOverLastDimensionMetric< TElastix >::ITKBaseType

Definition at line 160 of file elxVarianceOverLastDimensionMetric.h.

◆ MeasureType

template<class TElastix >

typedef Superclass1::MeasureType elastix::VarianceOverLastDimensionMetric< TElastix >::MeasureType

Definition at line 126 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageConstPointer

template<class TElastix >

typedef Superclass1::MovingImageConstPointer elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageConstPointer

Definition at line 103 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageDerivativeScalesType

template<class TElastix >

typedef Superclass1::MovingImageDerivativeScalesType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageDerivativeScalesType

Definition at line 143 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageLimiterOutputType

template<class TElastix >

typedef Superclass1::MovingImageLimiterOutputType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageLimiterOutputType

Definition at line 141 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageLimiterType

template<class TElastix >

typedef Superclass1::MovingImageLimiterType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageLimiterType

Definition at line 137 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageMaskPointer

template<class TElastix >

typedef Superclass1::MovingImageMaskPointer elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageMaskPointer

Definition at line 125 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageMaskType

template<class TElastix >

typedef Superclass1::MovingImageMaskType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageMaskType

Definition at line 124 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImagePixelType

template<class TElastix >

typedef Superclass1::MovingImagePixelType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImagePixelType

Definition at line 102 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageRegionType

template<class TElastix >

typedef Superclass1::MovingImageRegionType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageRegionType

Definition at line 130 of file elxVarianceOverLastDimensionMetric.h.

◆ MovingImageType

template<class TElastix >

typedef Superclass1::MovingImageType elastix::VarianceOverLastDimensionMetric< TElastix >::MovingImageType

Definition at line 101 of file elxVarianceOverLastDimensionMetric.h.

◆ OutputPointType

template<class TElastix >

typedef Superclass1::OutputPointType elastix::VarianceOverLastDimensionMetric< TElastix >::OutputPointType

Definition at line 111 of file elxVarianceOverLastDimensionMetric.h.

◆ ParametersType

template<class TElastix >

typedef Superclass1::ParametersType elastix::VarianceOverLastDimensionMetric< TElastix >::ParametersType

Definition at line 128 of file elxVarianceOverLastDimensionMetric.h.

◆ Pointer

template<class TElastix >

typedef itk::SmartPointer< Self > elastix::VarianceOverLastDimensionMetric< TElastix >::Pointer

Definition at line 82 of file elxVarianceOverLastDimensionMetric.h.

◆ RealType

template<class TElastix >

typedef Superclass1::RealType elastix::VarianceOverLastDimensionMetric< TElastix >::RealType

Definition at line 116 of file elxVarianceOverLastDimensionMetric.h.

◆ ReducedDimensionBSplineTransformBaseType

template<class TElastix >

typedef itk::AdvancedBSplineDeformableTransformBase< ScalarType, FixedImageDimension - 1 > elastix::VarianceOverLastDimensionMetric< TElastix >::ReducedDimensionBSplineTransformBaseType

Definition at line 170 of file elxVarianceOverLastDimensionMetric.h.

◆ RegistrationPointer

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::VarianceOverLastDimensionMetric< TElastix >::RegistrationPointer

Definition at line 159 of file elxVarianceOverLastDimensionMetric.h.

◆ RegistrationType

template<class TElastix >

typedef Superclass2::RegistrationType elastix::VarianceOverLastDimensionMetric< TElastix >::RegistrationType

Definition at line 158 of file elxVarianceOverLastDimensionMetric.h.

◆ ScalarType

template<class TElastix >

typedef Superclass1::ScalarType elastix::VarianceOverLastDimensionMetric< TElastix >::ScalarType

Definition at line 100 of file elxVarianceOverLastDimensionMetric.h.

◆ Self

template<class TElastix >

typedef VarianceOverLastDimensionMetric elastix::VarianceOverLastDimensionMetric< TElastix >::Self

Standard ITK-stuff.

Definition at line 77 of file elxVarianceOverLastDimensionMetric.h.

◆ StackTransformType

template<class TElastix >

typedef itk::StackTransform< ScalarType, FixedImageDimension, MovingImageDimension > elastix::VarianceOverLastDimensionMetric< TElastix >::StackTransformType

Definition at line 168 of file elxVarianceOverLastDimensionMetric.h.

◆ Superclass1

template<class TElastix >

typedef itk::VarianceOverLastDimensionImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType > elastix::VarianceOverLastDimensionMetric< TElastix >::Superclass1

Definition at line 80 of file elxVarianceOverLastDimensionMetric.h.

◆ Superclass2

template<class TElastix >

typedef MetricBase< TElastix > elastix::VarianceOverLastDimensionMetric< TElastix >::Superclass2

Definition at line 81 of file elxVarianceOverLastDimensionMetric.h.

◆ TransformJacobianType

template<class TElastix >

typedef Superclass1::TransformJacobianType elastix::VarianceOverLastDimensionMetric< TElastix >::TransformJacobianType

Definition at line 113 of file elxVarianceOverLastDimensionMetric.h.

◆ TransformParametersType

template<class TElastix >

typedef Superclass1::TransformParametersType elastix::VarianceOverLastDimensionMetric< TElastix >::TransformParametersType

Definition at line 112 of file elxVarianceOverLastDimensionMetric.h.

◆ TransformPointer

template<class TElastix >

typedef Superclass1::TransformPointer elastix::VarianceOverLastDimensionMetric< TElastix >::TransformPointer

Definition at line 109 of file elxVarianceOverLastDimensionMetric.h.

◆ TransformType

template<class TElastix >

typedef Superclass1::TransformType elastix::VarianceOverLastDimensionMetric< TElastix >::TransformType

Definition at line 108 of file elxVarianceOverLastDimensionMetric.h.

Constructor & Destructor Documentation

◆ VarianceOverLastDimensionMetric() [1/2]

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::VarianceOverLastDimensionMetric ( )

inlineprotected

The constructor.

Definition at line 193 of file elxVarianceOverLastDimensionMetric.h.

◆ ~VarianceOverLastDimensionMetric()

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::~VarianceOverLastDimensionMetric ( )

inlineoverrideprotected

The destructor.

Definition at line 195 of file elxVarianceOverLastDimensionMetric.h.

◆ VarianceOverLastDimensionMetric() [2/2]

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::VarianceOverLastDimensionMetric ( const Self & )

private

The private constructor.

Member Function Documentation

◆ BeforeEachResolution()

template<class TElastix >

void elastix::VarianceOverLastDimensionMetric< TElastix >::BeforeEachResolution ( void )

overridevirtual

Do some things before each resolution:

Set CheckNumberOfSamples setting
Set UseNormalization setting

Reimplemented from elastix::BaseComponent.

◆ BeforeRegistration()

template<class TElastix >

void elastix::VarianceOverLastDimensionMetric< TElastix >::BeforeRegistration ( void )

overridevirtual

Do some things before registration:

check the direction cosines

Reimplemented from elastix::BaseComponent.

◆ elxClassNameMacro()

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::elxClassNameMacro ( "VarianceOverLastDimensionMetric< TElastix >" )

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "VarianceOverLastDimensionMetric")

◆ GetClassName()

template<class TElastix >

virtual const char * elastix::VarianceOverLastDimensionMetric< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

◆ Initialize()

template<class TElastix >

void elastix::VarianceOverLastDimensionMetric< TElastix >::Initialize ( void )

override

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

◆ itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

◆ itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::VarianceOverLastDimensionMetric< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

◆ New()

template<class TElastix >

static Pointer elastix::VarianceOverLastDimensionMetric< TElastix >::New ( )

static

Method for creation through the object factory.

◆ operator=()

template<class TElastix >

void elastix::VarianceOverLastDimensionMetric< TElastix >::operator= ( const Self & )

private

The private copy constructor.

Detailed Description

Public Types

Public Member Functions

Static Public Member Functions

Protected Member Functions

Private Member Functions

Additional Inherited Members

Member Typedef Documentation

◆ BSplineTransformBaseType

◆ CombinationTransformType

◆ ConfigurationPointer

◆ ConfigurationType

◆ ConstPointer

◆ CoordinateRepresentationType

◆ DerivativeType

◆ ElastixPointer

◆ ElastixType

◆ FixedImageConstPointer

◆ FixedImageLimiterOutputType

◆ FixedImageLimiterType

◆ FixedImageMaskPointer

◆ FixedImageMaskType

◆ FixedImagePixelType

◆ FixedImageRegionType

◆ FixedImageSizeType

◆ FixedImageType

◆ GradientImageFilterPointer

◆ GradientImageFilterType

◆ GradientImagePointer

◆ GradientImageType

◆ GradientPixelType

◆ ImageSampleContainerPointer

◆ ImageSampleContainerType

◆ ImageSamplerPointer

◆ ImageSamplerType

◆ InputPointType

◆ InterpolatorPointer

◆ InterpolatorType

◆ ITKBaseType

◆ MeasureType

◆ MovingImageConstPointer

◆ MovingImageDerivativeScalesType

◆ MovingImageLimiterOutputType

◆ MovingImageLimiterType

◆ MovingImageMaskPointer

◆ MovingImageMaskType

◆ MovingImagePixelType

◆ MovingImageRegionType

◆ MovingImageType

◆ OutputPointType

◆ ParametersType

◆ Pointer

◆ RealType

◆ ReducedDimensionBSplineTransformBaseType

◆ RegistrationPointer

◆ RegistrationType

◆ ScalarType

◆ Self

◆ StackTransformType

◆ Superclass1

◆ Superclass2

◆ TransformJacobianType

◆ TransformParametersType

◆ TransformPointer

◆ TransformType

Constructor & Destructor Documentation

◆ VarianceOverLastDimensionMetric() [1/2]

◆ ~VarianceOverLastDimensionMetric()

◆ VarianceOverLastDimensionMetric() [2/2]

Member Function Documentation

◆ BeforeEachResolution()

◆ BeforeRegistration()

◆ elxClassNameMacro()

◆ GetClassName()

◆ Initialize()

◆ itkStaticConstMacro() [1/2]

◆ itkStaticConstMacro() [2/2]

◆ New()

◆ operator=()