elastix::TransformRigidityPenalty< TElastix > Class Template Reference

#include <elxTransformRigidityPenaltyTerm.h>

Detailed Description

template<class TElastix>
class elastix::TransformRigidityPenalty< TElastix >

A penalty term based on non-rigidity.

For more information check the paper:
M. Staring, S. Klein and J.P.W. Pluim, "A Rigidity Penalty Term for Nonrigid Registration," Medical Physics, vol. 34, no. 11, pp. 4098 - 4108, November 2007.

The parameters used in this class are:

Parameters:

Metric: Select this metric as follows:
(Metric "TransformRigidityPenalty")

Parameters:

LinearityConditionWeight: A parameter to weigh the linearity condition term of the rigidity term.
example: (LinearityConditionWeight 2.0)
Default is 1.0.

OrthonormalityConditionWeight: A parameter to weigh the orthonormality condition term of the rigidity term.
example: (OrthonormalityConditionWeight 2.0)
Default is 1.0.

PropernessConditionWeight: A parameter to weigh the properness condition term of the rigidity term.
example: (PropernessConditionWeight 2.0)
Default is 1.0.

UseLinearityCondition: A flag to specify the usage of the linearity condition term for optimisation.
example: (UseLinearityCondition "false")
Default is "true".

UseOrthonormalityCondition: A flag to specify the usage of the orthonormality condition term for optimisation.
example: (UseOrthonormalityCondition "false")
Default is "true".

UsePropernessCondition: A flag to specify the usage of the properness condition term for optimisation.
example: (UsePropernessCondition "false")
Default is "true".

CalculateLinearityCondition: A flag to specify if the linearity condition should still be calculated, even if it is not used for optimisation.
example: (CalculateLinearityCondition "false")
Default is "true".

CalculateOrthonormalityCondition: A flag to specify if the orthonormality condition should still be calculated, even if it is not used for optimisation.
example: (CalculateOrthonormalityCondition "false")
Default is "true".

CalculatePropernessCondition: A flag to specify if the properness condition should still be calculated, even if it is not used for optimisation.
example: (CalculatePropernessCondition "false")
Default is "true".

FixedRigidityImageName: the name of a coefficient image to specify the rigidity index of voxels in the fixed image.
example: (FixedRigidityImageName "fixedRigidityImage.mhd")
If not supplied the rigidity coefficient is not based on the fixed image, which is recommended.
If neither FixedRigidityImageName nor MovingRigidityImageName are supplied, the rigidity penalty term is evaluated on the whole transform input domain.

MovingRigidityImageName: the name of a coefficient image to specify the rigidity index of voxels in the moving image.
example: (MovingRigidityImageName "movingRigidityImage.mhd")
If not supplied the rigidity coefficient is not based on the moving image, which is NOT recommended.
If neither FixedRigidityImageName nor MovingRigidityImageName are supplied, the rigidity penalty term is evaluated on the whole transform input domain.

DilateRigidityImages: flag to specify the dilation of the rigidity coefficient images. With this the region of rigidity can be extended to force rigidity of the inner region.
example: (DilateRigidityImages "false" "false" "true")
Default is "true".

DilationRadiusMultiplier: the dilation radius is a multiplier times the grid spacing of the B-spline transform.
example: (DilationRadiusMultiplier 1.0 1.0 2.0)
Default is 1.0.

Definition at line 110 of file elxTransformRigidityPenaltyTerm.h.

Inheritance diagram for elastix::TransformRigidityPenalty< TElastix >:

Public Types
typedef Superclass1::CoefficientImageType	CoefficientImageType
typedef Superclass2::ConfigurationPointer	ConfigurationPointer
typedef Superclass2::ConfigurationType	ConfigurationType
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass1::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass1::DerivativeType	DerivativeType
typedef Superclass2::ElastixPointer	ElastixPointer
typedef Superclass2::ElastixType	ElastixType
typedef Superclass1::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass1::FixedImageLimiterOutputType	FixedImageLimiterOutputType
typedef Superclass1::FixedImageLimiterType	FixedImageLimiterType
typedef Superclass1::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass1::FixedImageMaskType	FixedImageMaskType
typedef Superclass1::FixedImagePixelType	FixedImagePixelType
typedef Superclass1::FixedImageRegionType	FixedImageRegionType
typedef Superclass1::FixedImageType	FixedImageType
typedef Superclass1::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass1::GradientImageFilterType	GradientImageFilterType
typedef Superclass1::GradientImagePointer	GradientImagePointer
typedef Superclass1::GradientImageType	GradientImageType
typedef Superclass1::GradientPixelType	GradientPixelType
typedef Superclass1::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass1::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass1::ImageSamplerPointer	ImageSamplerPointer
typedef Superclass1::ImageSamplerType	ImageSamplerType
typedef Superclass1::InputPointType	InputPointType
typedef Superclass1::InterpolatorPointer	InterpolatorPointer
typedef Superclass1::InterpolatorType	InterpolatorType
typedef Superclass2::ITKBaseType	ITKBaseType
typedef Superclass1::MeasureType	MeasureType
typedef Superclass1::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass1::MovingImageLimiterOutputType	MovingImageLimiterOutputType
typedef Superclass1::MovingImageLimiterType	MovingImageLimiterType
typedef Superclass1::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass1::MovingImageMaskType	MovingImageMaskType
typedef Superclass1::MovingImagePixelType	MovingImagePixelType
typedef Superclass1::MovingImageRegionType	MovingImageRegionType
typedef Superclass1::MovingImageType	MovingImageType
typedef Superclass1::OutputPointType	OutputPointType
typedef Superclass1::ParametersType	ParametersType
typedef itk::SmartPointer< Self >	Pointer
typedef Superclass1::RealType	RealType
typedef Superclass2::RegistrationPointer	RegistrationPointer
typedef Superclass2::RegistrationType	RegistrationType
typedef TransformRigidityPenalty	Self
typedef itk::TransformRigidityPenaltyTerm< typename MetricBase< TElastix >::FixedImageType, double >	Superclass1
typedef MetricBase< TElastix >	Superclass2
typedef Superclass1::TransformJacobianType	TransformJacobianType
typedef Superclass1::TransformParametersType	TransformParametersType
typedef Superclass1::TransformPointer	TransformPointer
typedef Superclass1::TransformType	TransformType
Public Types inherited from itk::TransformRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
typedef Superclass::BSplineOrder1TransformPointer	BSplineOrder1TransformPointer
typedef Superclass::BSplineOrder1TransformType	BSplineOrder1TransformType
typedef Superclass::BSplineOrder2TransformPointer	BSplineOrder2TransformPointer
typedef Superclass::BSplineOrder2TransformType	BSplineOrder2TransformType
typedef Superclass::BSplineOrder3TransformPointer	BSplineOrder3TransformPointer
typedef Superclass::BSplineOrder3TransformType	BSplineOrder3TransformType
typedef BSplineTransformType::Pointer	BSplineTransformPointer
typedef BSplineOrder3TransformType	BSplineTransformType
typedef ImageRegionIterator< CoefficientImageType >	CoefficientImageIteratorType
typedef CoefficientImageType::Pointer	CoefficientImagePointer
typedef CoefficientImageType::SpacingType	CoefficientImageSpacingType
typedef BSplineTransformType::ImageType	CoefficientImageType
typedef Superclass::CombinationTransformType	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeValueType	DerivativeValueType
typedef DilateFilterType::Pointer	DilateFilterPointer
typedef GrayscaleDilateImageFilter< RigidityImageType, RigidityImageType, StructuringElementType >	DilateFilterType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef BSplineTransformType::SpacingType	GridSpacingType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InternalMatrixType	InternalMatrixType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef Superclass::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef NeighborhoodIterator< CoefficientImageType >	NeighborhoodIteratorType
typedef NeighborhoodType::SizeType	NeighborhoodSizeType
typedef Neighborhood< ScalarType, itkGetStaticConstMacro(FixedImageDimension) >	NeighborhoodType
typedef NeighborhoodOperatorImageFilter< CoefficientImageType, CoefficientImageType >	NOIFType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef NeighborhoodIteratorType::RadiusType	RadiusType
typedef Superclass::RealType	RealType
typedef RigidityImageType::IndexType	RigidityImageIndexType
typedef ImageRegionIterator< RigidityImageType >	RigidityImageIteratorType
typedef RigidityImageType::Pointer	RigidityImagePointer
typedef RigidityImageType::PointType	RigidityImagePointType
typedef RigidityImageType::RegionType	RigidityImageRegionType
typedef CoefficientImageType	RigidityImageType
typedef RigidityImageType::PixelType	RigidityPixelType
typedef Superclass::ScalarType	ScalarType
typedef TransformRigidityPenaltyTerm	Self
typedef StructuringElementType::RadiusType	SERadiusType
typedef Superclass::SpatialHessianType	SpatialHessianType
typedef Superclass::SpatialJacobianType	SpatialJacobianType
typedef BinaryBallStructuringElement< RigidityPixelType, itkGetStaticConstMacro(FixedImageDimension) >	StructuringElementType
typedef TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >	Superclass
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
typedef Superclass::BSplineOrder1TransformPointer	BSplineOrder1TransformPointer
typedef Superclass::BSplineOrder1TransformType	BSplineOrder1TransformType
typedef Superclass::BSplineOrder2TransformPointer	BSplineOrder2TransformPointer
typedef Superclass::BSplineOrder2TransformType	BSplineOrder2TransformType
typedef Superclass::BSplineOrder3TransformPointer	BSplineOrder3TransformPointer
typedef Superclass::BSplineOrder3TransformType	BSplineOrder3TransformType
typedef Superclass::CombinationTransformType	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::DerivativeValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::InputPointType	InputPointType
typedef TransformType::InternalMatrixType	InternalMatrixType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef TransformType::JacobianOfSpatialHessianType	JacobianOfSpatialHessianType
typedef TransformType::JacobianOfSpatialJacobianType	JacobianOfSpatialJacobianType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef double	ScalarType
typedef TransformPenaltyTerm	Self
typedef TransformType::SpatialHessianType	SpatialHessianType
typedef TransformType::SpatialJacobianType	SpatialJacobianType
typedef AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >	Superclass
typedef Superclass::ThreaderType	ThreaderType
typedef Superclass::ThreadInfoType	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::AdvancedTransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedImageMaskSpatialObject2Type
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingImageMaskSpatialObject2Type
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >	Superclass
typedef itk::PlatformMultiThreader	ThreaderType
typedef ThreaderType::WorkUnitInfo	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from elastix::MetricBase< TElastix >
typedef itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >	AdvancedMetricType
typedef Superclass::ConfigurationPointer	ConfigurationPointer
typedef Superclass::ConfigurationType	ConfigurationType
typedef ITKBaseType::ParametersValueType	CoordinateRepresentationType
typedef Superclass::ElastixPointer	ElastixPointer
typedef Superclass::ElastixType	ElastixType
typedef ElastixType::FixedImageType	FixedImageType
typedef itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	FixedPointSetType
typedef FixedImageType::PointType	FixedPointType
typedef FixedPointType::ValueType	FixedPointValueType
typedef AdvancedMetricType::ImageSamplerType	ImageSamplerBaseType
typedef itk::SingleValuedCostFunction	ITKBaseType
typedef ITKBaseType::MeasureType	MeasureType
typedef AdvancedMetricType::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef ElastixType::MovingImageType	MovingImageType
typedef itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	MovingPointSetType
typedef MovingImageType::PointType	MovingPointType
typedef MovingPointType::ValueType	MovingPointValueType
typedef Superclass::RegistrationPointer	RegistrationPointer
typedef Superclass::RegistrationType	RegistrationType
typedef MetricBase	Self
typedef BaseComponentSE< TElastix >	Superclass
Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef Configuration::Pointer	ConfigurationPointer
typedef Configuration	ConfigurationType
typedef itk::WeakPointer< ElastixType >	ElastixPointer
typedef TElastix	ElastixType
typedef RegistrationType *	RegistrationPointer
typedef ElastixType::RegistrationBaseType	RegistrationType
typedef BaseComponentSE	Self
typedef BaseComponent	Superclass

Public Member Functions
void	AfterEachIteration (void) override
void	BeforeEachResolution (void) override
void	BeforeRegistration (void) override
	elxClassNameMacro ("TransformRigidityPenalty")
virtual const char *	GetClassName () const
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
void	SelectNewSamples (void) override
Public Member Functions inherited from itk::TransformRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const override
void	CheckUseAndCalculationBooleans (void)
void	FillRigidityCoefficientImage (const ParametersType &parameters) const
virtual const char *	GetClassName () const
void	GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const override
virtual const MeasureType &	GetLinearityConditionGradientMagnitude ()
virtual const MeasureType &	GetLinearityConditionValue ()
virtual ScalarType	GetLinearityConditionWeight ()
virtual const MeasureType &	GetOrthonormalityConditionGradientMagnitude ()
virtual const MeasureType &	GetOrthonormalityConditionValue ()
virtual ScalarType	GetOrthonormalityConditionWeight ()
virtual const MeasureType &	GetPropernessConditionGradientMagnitude ()
virtual const MeasureType &	GetPropernessConditionValue ()
virtual ScalarType	GetPropernessConditionWeight ()
MeasureType	GetValue (const ParametersType &parameters) const override
void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const override
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (ImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, FixedImageType::ImageDimension)
virtual void	SetBSplineTransform (BSplineTransformType *_arg)
virtual void	SetCalculateLinearityCondition (bool _arg)
virtual void	SetCalculateOrthonormalityCondition (bool _arg)
virtual void	SetCalculatePropernessCondition (bool _arg)
virtual void	SetDilateRigidityImages (bool _arg)
virtual void	SetDilationRadiusMultiplier (CoordinateRepresentationType _arg)
virtual void	SetFixedRigidityImage (RigidityImageType *_arg)
virtual void	SetLinearityConditionWeight (ScalarType _arg)
virtual void	SetMovingRigidityImage (RigidityImageType *_arg)
virtual void	SetOrthonormalityConditionWeight (ScalarType _arg)
virtual void	SetPropernessConditionWeight (ScalarType _arg)
virtual void	SetUseFixedRigidityImage (bool _arg)
virtual void	SetUseLinearityCondition (bool _arg)
virtual void	SetUseMovingRigidityImage (bool _arg)
virtual void	SetUseOrthonormalityCondition (bool _arg)
virtual void	SetUsePropernessCondition (bool _arg)
Public Member Functions inherited from itk::TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
virtual const char *	GetClassName () const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const char *	GetClassName () const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const override
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()
Public Member Functions inherited from elastix::MetricBase< TElastix >
void	AfterEachIterationBase (void) override
void	BeforeEachResolutionBase (void) override
virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler (void) const
virtual bool	GetAdvancedMetricUseImageSampler (void) const
virtual ITKBaseType *	GetAsITKBaseType (void)
virtual const ITKBaseType *	GetAsITKBaseType (void) const
virtual const char *	GetClassName () const
virtual MeasureType	GetCurrentExactMetricValue (void) const
virtual bool	GetShowExactMetricValue (void) const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SelectNewSamples (void)
virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
ConfigurationType *	GetConfiguration (void) const
ElastixType *	GetElastix (void) const
RegistrationPointer	GetRegistration (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponentSE)
void	SetConfiguration (ConfigurationType *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)
virtual void	AfterEachIterationBase (void)
virtual void	AfterEachResolution (void)
virtual void	AfterEachResolutionBase (void)
virtual void	AfterRegistration (void)
virtual void	AfterRegistrationBase (void)
virtual int	BeforeAll (void)
virtual int	BeforeAllBase (void)
virtual void	BeforeEachResolution (void)
virtual void	BeforeEachResolutionBase (void)
virtual void	BeforeRegistration (void)
virtual void	BeforeRegistrationBase (void)
virtual const char *	elxGetClassName (void) const
const char *	GetComponentLabel (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::TransformRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
static std::string	ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision)
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Member Functions
	TransformRigidityPenalty ()
	~TransformRigidityPenalty () override
Protected Member Functions inherited from itk::TransformRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
void	PrintSelf (std::ostream &os, Indent indent) const override
	TransformRigidityPenaltyTerm ()
	~TransformRigidityPenaltyTerm () override
Protected Member Functions inherited from itk::TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
virtual bool	CheckForBSplineTransform2 (BSplineOrder3TransformPointer &bspline) const
	TransformPenaltyTerm ()
	~TransformPenaltyTerm () override
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void)
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
	~AdvancedImageToImageMetric () override
Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)
	MetricBase ()
	~MetricBase () override
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Member Functions
void	operator= (const Self &)
	TransformRigidityPenalty (const Self &)

Additional Inherited Members
Protected Types inherited from itk::TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
typedef Superclass::FixedImageIndexType	FixedImageIndexType
typedef Superclass::FixedImageIndexValueType	FixedImageIndexValueType
typedef Superclass::FixedImagePointType	FixedImagePointType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImagePointType	MovingImagePointType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
Protected Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType
Protected Types inherited from elastix::MetricBase< TElastix >
typedef ExactMetricImageSamplerType::Pointer	ExactMetricImageSamplerPointer
typedef itk::ImageGridSampler< FixedImageType >	ExactMetricImageSamplerType
typedef ExactMetricImageSamplerType::SampleGridSpacingType	ExactMetricSampleGridSpacingType
typedef ITKBaseType::ParametersType	ParametersType
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::FixedImageType >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
double	m_FixedLimitRangeRatio
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
double	m_MovingLimitRangeRatio
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP
Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue
unsigned int	m_ExactMetricEachXNumberOfIterations
ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing
ExactMetricImageSamplerPointer	m_ExactMetricSampler
bool	m_ShowExactMetricValue
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration {}
ElastixPointer	m_Elastix {}
RegistrationPointer	m_Registration {}

Member Typedef Documentation

CoefficientImageType

template<class TElastix >

typedef Superclass1::CoefficientImageType elastix::TransformRigidityPenalty< TElastix >::CoefficientImageType

Definition at line 179 of file elxTransformRigidityPenaltyTerm.h.

ConfigurationPointer

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::TransformRigidityPenalty< TElastix >::ConfigurationPointer

Definition at line 193 of file elxTransformRigidityPenaltyTerm.h.

ConfigurationType

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::TransformRigidityPenalty< TElastix >::ConfigurationType

Definition at line 192 of file elxTransformRigidityPenaltyTerm.h.

ConstPointer

template<class TElastix >

typedef itk::SmartPointer< const Self > elastix::TransformRigidityPenalty< TElastix >::ConstPointer

Definition at line 125 of file elxTransformRigidityPenaltyTerm.h.

CoordinateRepresentationType

template<class TElastix >

typedef Superclass1::CoordinateRepresentationType elastix::TransformRigidityPenalty< TElastix >::CoordinateRepresentationType

Typedefs from the superclass.

Definition at line 140 of file elxTransformRigidityPenaltyTerm.h.

DerivativeType

template<class TElastix >

typedef Superclass1::DerivativeType elastix::TransformRigidityPenalty< TElastix >::DerivativeType

Definition at line 166 of file elxTransformRigidityPenaltyTerm.h.

ElastixPointer

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::TransformRigidityPenalty< TElastix >::ElastixPointer

Definition at line 191 of file elxTransformRigidityPenaltyTerm.h.

ElastixType

template<class TElastix >

typedef Superclass2::ElastixType elastix::TransformRigidityPenalty< TElastix >::ElastixType

Typedef's inherited from elastix.

Definition at line 190 of file elxTransformRigidityPenaltyTerm.h.

FixedImageConstPointer

template<class TElastix >

typedef Superclass1::FixedImageConstPointer elastix::TransformRigidityPenalty< TElastix >::FixedImageConstPointer

Definition at line 145 of file elxTransformRigidityPenaltyTerm.h.

FixedImageLimiterOutputType

template<class TElastix >

typedef Superclass1::FixedImageLimiterOutputType elastix::TransformRigidityPenalty< TElastix >::FixedImageLimiterOutputType

Definition at line 176 of file elxTransformRigidityPenaltyTerm.h.

FixedImageLimiterType

template<class TElastix >

typedef Superclass1::FixedImageLimiterType elastix::TransformRigidityPenalty< TElastix >::FixedImageLimiterType

Definition at line 174 of file elxTransformRigidityPenaltyTerm.h.

FixedImageMaskPointer

template<class TElastix >

typedef Superclass1::FixedImageMaskPointer elastix::TransformRigidityPenalty< TElastix >::FixedImageMaskPointer

Definition at line 162 of file elxTransformRigidityPenaltyTerm.h.

FixedImageMaskType

template<class TElastix >

typedef Superclass1::FixedImageMaskType elastix::TransformRigidityPenalty< TElastix >::FixedImageMaskType

Definition at line 161 of file elxTransformRigidityPenaltyTerm.h.

FixedImagePixelType

template<class TElastix >

typedef Superclass1::FixedImagePixelType elastix::TransformRigidityPenalty< TElastix >::FixedImagePixelType

Definition at line 168 of file elxTransformRigidityPenaltyTerm.h.

FixedImageRegionType

template<class TElastix >

typedef Superclass1::FixedImageRegionType elastix::TransformRigidityPenalty< TElastix >::FixedImageRegionType

Definition at line 146 of file elxTransformRigidityPenaltyTerm.h.

FixedImageType

template<class TElastix >

typedef Superclass1::FixedImageType elastix::TransformRigidityPenalty< TElastix >::FixedImageType

Definition at line 144 of file elxTransformRigidityPenaltyTerm.h.

GradientImageFilterPointer

template<class TElastix >

typedef Superclass1::GradientImageFilterPointer elastix::TransformRigidityPenalty< TElastix >::GradientImageFilterPointer

Definition at line 160 of file elxTransformRigidityPenaltyTerm.h.

GradientImageFilterType

template<class TElastix >

typedef Superclass1::GradientImageFilterType elastix::TransformRigidityPenalty< TElastix >::GradientImageFilterType

Definition at line 159 of file elxTransformRigidityPenaltyTerm.h.

GradientImagePointer

template<class TElastix >

typedef Superclass1::GradientImagePointer elastix::TransformRigidityPenalty< TElastix >::GradientImagePointer

Definition at line 158 of file elxTransformRigidityPenaltyTerm.h.

GradientImageType

template<class TElastix >

typedef Superclass1::GradientImageType elastix::TransformRigidityPenalty< TElastix >::GradientImageType

Definition at line 157 of file elxTransformRigidityPenaltyTerm.h.

GradientPixelType

template<class TElastix >

typedef Superclass1::GradientPixelType elastix::TransformRigidityPenalty< TElastix >::GradientPixelType

Definition at line 156 of file elxTransformRigidityPenaltyTerm.h.

ImageSampleContainerPointer

template<class TElastix >

typedef Superclass1::ImageSampleContainerPointer elastix::TransformRigidityPenalty< TElastix >::ImageSampleContainerPointer

Definition at line 173 of file elxTransformRigidityPenaltyTerm.h.

ImageSampleContainerType

template<class TElastix >

typedef Superclass1::ImageSampleContainerType elastix::TransformRigidityPenalty< TElastix >::ImageSampleContainerType

Definition at line 172 of file elxTransformRigidityPenaltyTerm.h.

ImageSamplerPointer

template<class TElastix >

typedef Superclass1::ImageSamplerPointer elastix::TransformRigidityPenalty< TElastix >::ImageSamplerPointer

Definition at line 171 of file elxTransformRigidityPenaltyTerm.h.

ImageSamplerType

template<class TElastix >

typedef Superclass1::ImageSamplerType elastix::TransformRigidityPenalty< TElastix >::ImageSamplerType

Definition at line 170 of file elxTransformRigidityPenaltyTerm.h.

InputPointType

template<class TElastix >

typedef Superclass1::InputPointType elastix::TransformRigidityPenalty< TElastix >::InputPointType

Definition at line 149 of file elxTransformRigidityPenaltyTerm.h.

InterpolatorPointer

template<class TElastix >

typedef Superclass1::InterpolatorPointer elastix::TransformRigidityPenalty< TElastix >::InterpolatorPointer

Definition at line 154 of file elxTransformRigidityPenaltyTerm.h.

InterpolatorType

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::TransformRigidityPenalty< TElastix >::InterpolatorType

Definition at line 153 of file elxTransformRigidityPenaltyTerm.h.

ITKBaseType

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::TransformRigidityPenalty< TElastix >::ITKBaseType

Definition at line 196 of file elxTransformRigidityPenaltyTerm.h.

MeasureType

template<class TElastix >

typedef Superclass1::MeasureType elastix::TransformRigidityPenalty< TElastix >::MeasureType

Definition at line 165 of file elxTransformRigidityPenaltyTerm.h.

MovingImageConstPointer

template<class TElastix >

typedef Superclass1::MovingImageConstPointer elastix::TransformRigidityPenalty< TElastix >::MovingImageConstPointer

Definition at line 143 of file elxTransformRigidityPenaltyTerm.h.

MovingImageLimiterOutputType

template<class TElastix >

typedef Superclass1::MovingImageLimiterOutputType elastix::TransformRigidityPenalty< TElastix >::MovingImageLimiterOutputType

Definition at line 177 of file elxTransformRigidityPenaltyTerm.h.

MovingImageLimiterType

template<class TElastix >

typedef Superclass1::MovingImageLimiterType elastix::TransformRigidityPenalty< TElastix >::MovingImageLimiterType

Definition at line 175 of file elxTransformRigidityPenaltyTerm.h.

MovingImageMaskPointer

template<class TElastix >

typedef Superclass1::MovingImageMaskPointer elastix::TransformRigidityPenalty< TElastix >::MovingImageMaskPointer

Definition at line 164 of file elxTransformRigidityPenaltyTerm.h.

MovingImageMaskType

template<class TElastix >

typedef Superclass1::MovingImageMaskType elastix::TransformRigidityPenalty< TElastix >::MovingImageMaskType

Definition at line 163 of file elxTransformRigidityPenaltyTerm.h.

MovingImagePixelType

template<class TElastix >

typedef Superclass1::MovingImagePixelType elastix::TransformRigidityPenalty< TElastix >::MovingImagePixelType

Definition at line 142 of file elxTransformRigidityPenaltyTerm.h.

MovingImageRegionType

template<class TElastix >

typedef Superclass1::MovingImageRegionType elastix::TransformRigidityPenalty< TElastix >::MovingImageRegionType

Definition at line 169 of file elxTransformRigidityPenaltyTerm.h.

MovingImageType

template<class TElastix >

typedef Superclass1::MovingImageType elastix::TransformRigidityPenalty< TElastix >::MovingImageType

Definition at line 141 of file elxTransformRigidityPenaltyTerm.h.

OutputPointType

template<class TElastix >

typedef Superclass1::OutputPointType elastix::TransformRigidityPenalty< TElastix >::OutputPointType

Definition at line 150 of file elxTransformRigidityPenaltyTerm.h.

ParametersType

template<class TElastix >

typedef Superclass1::ParametersType elastix::TransformRigidityPenalty< TElastix >::ParametersType

Definition at line 167 of file elxTransformRigidityPenaltyTerm.h.

Pointer

template<class TElastix >

typedef itk::SmartPointer< Self > elastix::TransformRigidityPenalty< TElastix >::Pointer

Definition at line 124 of file elxTransformRigidityPenaltyTerm.h.

RealType

template<class TElastix >

typedef Superclass1::RealType elastix::TransformRigidityPenalty< TElastix >::RealType

Definition at line 155 of file elxTransformRigidityPenaltyTerm.h.

RegistrationPointer

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::TransformRigidityPenalty< TElastix >::RegistrationPointer

Definition at line 195 of file elxTransformRigidityPenaltyTerm.h.

RegistrationType

template<class TElastix >

typedef Superclass2::RegistrationType elastix::TransformRigidityPenalty< TElastix >::RegistrationType

Definition at line 194 of file elxTransformRigidityPenaltyTerm.h.

Self

template<class TElastix >

typedef TransformRigidityPenalty elastix::TransformRigidityPenalty< TElastix >::Self

Standard ITK-stuff.

Definition at line 119 of file elxTransformRigidityPenaltyTerm.h.

Superclass1

template<class TElastix >

typedef itk::TransformRigidityPenaltyTerm< typename MetricBase< TElastix >::FixedImageType, double > elastix::TransformRigidityPenalty< TElastix >::Superclass1

Definition at line 122 of file elxTransformRigidityPenaltyTerm.h.

Superclass2

template<class TElastix >

typedef MetricBase< TElastix > elastix::TransformRigidityPenalty< TElastix >::Superclass2

Definition at line 123 of file elxTransformRigidityPenaltyTerm.h.

TransformJacobianType

template<class TElastix >

typedef Superclass1::TransformJacobianType elastix::TransformRigidityPenalty< TElastix >::TransformJacobianType

Definition at line 152 of file elxTransformRigidityPenaltyTerm.h.

TransformParametersType

template<class TElastix >

typedef Superclass1::TransformParametersType elastix::TransformRigidityPenalty< TElastix >::TransformParametersType

Definition at line 151 of file elxTransformRigidityPenaltyTerm.h.

TransformPointer

template<class TElastix >

typedef Superclass1::TransformPointer elastix::TransformRigidityPenalty< TElastix >::TransformPointer

Definition at line 148 of file elxTransformRigidityPenaltyTerm.h.

TransformType

template<class TElastix >

typedef Superclass1::TransformType elastix::TransformRigidityPenalty< TElastix >::TransformType

Definition at line 147 of file elxTransformRigidityPenaltyTerm.h.

Constructor & Destructor Documentation

TransformRigidityPenalty() [1/2]

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::TransformRigidityPenalty ( )

inlineprotected

The constructor.

Definition at line 232 of file elxTransformRigidityPenaltyTerm.h.

~TransformRigidityPenalty()

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::~TransformRigidityPenalty ( )

inlineoverrideprotected

The destructor.

Definition at line 235 of file elxTransformRigidityPenaltyTerm.h.

TransformRigidityPenalty() [2/2]

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::TransformRigidityPenalty ( const Self &  )

private

The private constructor.

Member Function Documentation

AfterEachIteration()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::AfterEachIteration ( void  )

overridevirtual

Do some things after each iteration:

• Print the OC, PC, LC parts of the rigidity term.

Reimplemented from elastix::BaseComponent.

BeforeEachResolution()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::BeforeEachResolution ( void  )

overridevirtual

Do some things before each resolution:

• Read all parameters.

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::BeforeRegistration ( void  )

overridevirtual

Do some things before registration:

• Read the fixed rigidity image.
• Read the moving rigidity image.
• Setup some extra target cells.

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::elxClassNameMacro

(

"TransformRigidityPenalty< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "TransformRigidityPenalty")

GetClassName()

template<class TElastix >

virtual const char * elastix::TransformRigidityPenalty< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

Initialize()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::Initialize ( void  )

override

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::TransformRigidityPenalty< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

New()

template<class TElastix >

static Pointer elastix::TransformRigidityPenalty< TElastix >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::operator= ( const Self &  )

private

The private copy constructor.

SelectNewSamples()

template<class TElastix >

void elastix::TransformRigidityPenalty< TElastix >::SelectNewSamples ( void  )

inlineoverridevirtual

This metric is advanced (so it has a sampling possibility), but it purposely does not use samplers. The MetricBase class, however, issues a warning if this is the case, so we overwrite that function.

Reimplemented from elastix::MetricBase< TElastix >.

Definition at line 227 of file elxTransformRigidityPenaltyTerm.h.