elastix::KNNGraphAlphaMutualInformationMetric< TElastix > Class Template Reference

#include <elxKNNGraphAlphaMutualInformationMetric.h>

Detailed Description

template<class TElastix>
class elastix::KNNGraphAlphaMutualInformationMetric< TElastix >

A metric based on the itk::KNNGraphAlphaMutualInformationImageToImageMetric.

The parameters used in this class are:

Parameters:

Metric: Select this metric as follows:
(Metric "KNNGraphAlphaMutualInformation")

Alpha: since this metric calculates alpha - mutual information.
(Alpha 0.5)
Choose a value between 0.0 and 1.0. The default is 0.5.

TreeType: The type of the kNN binary tree.
(TreeType "BDTree" "BruteForceTree")
Choose one of { KDTree, BDTree, BruteForceTree }.
The default is "KDTree" for all resolutions.

BucketSize: The maximum number of samples in one bucket.
This parameter influences the calculation time only, and is not appropiate for the BruteForceTree.
(BucketSize 5 100 50)
The default is 50 for all resolutions.

SplittingRule: This rule defines how the feature space is split.
(SplittingRule "ANN_KD_STD" "ANN_KD_FAIR")
Choose one of { ANN_KD_STD, ANN_KD_MIDPT, ANN_KD_SL_MIDPT, ANN_KD_FAIR, ANN_KD_SL_FAIR, ANN_KD_SUGGEST }
The default is "ANN_KD_SL_MIDPT" for all resolutions.

ShrinkingRule: This rule defines how the feature space is shrinked.
(ShrinkingRule "ANN_BD_CENTROID" "ANN_BD_NONE")
Choose one of { ANN_BD_NONE, ANN_BD_SIMPLE, ANN_BD_CENTROID, ANN_BD_SUGGEST }
The default is "ANN_BD_SIMPLE" for all resolutions.

TreeSearchType: The type of the binary tree searcher.
(TreeSearchType "Standard" "FixedRadius")
Choose one of { Standard, FixedRadius, Priority }
The default is "Standard" for all resolutions.

KNearestNeighbours: The number of nearest neighbours to be searched.
(KNearestNeighbours 50 20 35)
The default is 20 for all resolutions.

ErrorBound: error accepted in finding the nearest neighbours.
An ErrorBound of 0.0 equals exact searching, higher error bounds should result in smaller computation times.
(ErrorBound 32.0 8.0 0.0)
The default is 0.0 for all resolutions.

SquaredSearchRadius: the radius of the sphere where there is searched for neighbours.
This option is only appropiate for FixedRadius search.
(SquaredSearchRadius 32.0 8.0 8.0)
The default is 0.0 for all resolutions, which means no radius.

AvoidDivisionBy: a small number to avoid division by zero in the implentation.
(AvoidDivisionBy 0.000000001)
The default is 1e-5.

Warning

Note that we assume the FixedFeatureImageType to have the same pixeltype as the FixedImageType

See also

KNNGraphAlphaMutualInformationImageToImageMetric, ParzenWindowMutualInformationImageToImageMetric

Definition at line 82 of file elxKNNGraphAlphaMutualInformationMetric.h.

Inheritance diagram for elastix::KNNGraphAlphaMutualInformationMetric< TElastix >:

Public Types
typedef Superclass2::ConfigurationPointer	ConfigurationPointer
typedef Superclass2::ConfigurationType	ConfigurationType
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass1::DerivativeType	DerivativeType
typedef Superclass2::ElastixPointer	ElastixPointer
typedef Superclass2::ElastixType	ElastixType
typedef FixedImageType	FixedFeatureImageType
typedef Superclass1::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass1::FixedImageType	FixedImageType
typedef Superclass1::InterpolatorType	InterpolatorType
typedef Superclass2::ITKBaseType	ITKBaseType
typedef Superclass1::MeasureType	MeasureType
typedef MovingImageType	MovingFeatureImageType
typedef Superclass1::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass1::MovingImageType	MovingImageType
typedef Superclass1::ParametersType	ParametersType
typedef itk::SmartPointer< Self >	Pointer
typedef Superclass2::RegistrationPointer	RegistrationPointer
typedef Superclass2::RegistrationType	RegistrationType
typedef KNNGraphAlphaMutualInformationMetric	Self
typedef itk::KNNGraphAlphaMutualInformationImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType >	Superclass1
typedef MetricBase< TElastix >	Superclass2
typedef Superclass1::TransformJacobianType	TransformJacobianType
typedef Superclass1::TransformPointer	TransformPointer
typedef Superclass1::TransformType	TransformType
Public Types inherited from itk::KNNGraphAlphaMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef ANNbdTree< ListSampleType >	ANNbdTreeType
typedef ANNBruteForceTree< ListSampleType >	ANNBruteForceTreeType
typedef ANNFixedRadiusTreeSearch< ListSampleType >	ANNFixedRadiusTreeSearchType
typedef ANNkDTree< ListSampleType >	ANNkDTreeType
typedef ANNPriorityTreeSearch< ListSampleType >	ANNPriorityTreeSearchType
typedef ANNStandardTreeSearch< ListSampleType >	ANNStandardTreeSearchType
typedef BinaryKNNTreeType::Pointer	BinaryKNNTreePointer
typedef BinaryKNNTreeSearchType::Pointer	BinaryKNNTreeSearchPointer
typedef BinaryTreeSearchBase< ListSampleType >	BinaryKNNTreeSearchType
typedef BinaryTreeBase< ListSampleType >	BinaryKNNTreeType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef BinaryKNNTreeSearchType::DistanceArrayType	DistanceArrayType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImageInterpolatorVectorType	FixedImageInterpolatorVectorType
typedef Superclass::FixedImageLimiterOutputType	FixedImageLimiterOutputType
typedef Superclass::FixedImageLimiterType	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef Superclass::FixedImageMaskVectorType	FixedImageMaskVectorType
typedef Superclass::FixedImagePixelType	FixedImagePixelType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageRegionVectorType	FixedImageRegionVectorType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::FixedImageVectorType	FixedImageVectorType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::ImageSampleContainerPointer	ImageSampleContainerPointer
typedef Superclass::ImageSampleContainerType	ImageSampleContainerType
typedef Superclass::ImageSamplerPointer	ImageSamplerPointer
typedef Superclass::ImageSamplerType	ImageSamplerType
typedef BinaryKNNTreeSearchType::IndexArrayType	IndexArrayType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::InterpolatorVectorType	InterpolatorVectorType
typedef ListSampleType::Pointer	ListSamplePointer
typedef Statistics::ListSampleCArray< MeasurementVectorType, double >	ListSampleType
typedef Array< double >	MeasurementVectorType
typedef MeasurementVectorType::ValueType	MeasurementVectorValueType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageLimiterOutputType	MovingImageLimiterOutputType
typedef Superclass::MovingImageLimiterType	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImageMaskVectorType	MovingImageMaskVectorType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImageRegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef Superclass::MovingImageVectorType	MovingImageVectorType
typedef Superclass::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef KNNGraphAlphaMutualInformationImageToImageMetric	Self
typedef MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef TransformJacobianType::ValueType	TransformJacobianValueType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageInterpolatorType::Pointer	FixedImageInterpolatorPointer
typedef InterpolateImageFunction< FixedImageType, CoordinateRepresentationType >	FixedImageInterpolatorType
typedef std::vector< FixedImageInterpolatorPointer >	FixedImageInterpolatorVectorType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef std::vector< FixedImageMaskPointer >	FixedImageMaskVectorType
typedef Superclass::FixedImagePointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef std::vector< FixedImageRegionType >	FixedImageRegionVectorType
typedef Superclass::FixedImageType	FixedImageType
typedef std::vector< FixedImageConstPointer >	FixedImageVectorType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef std::vector< InterpolatorPointer >	InterpolatorVectorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef std::vector< MovingImageMaskPointer >	MovingImageMaskVectorType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef Superclass::MovingImagePointer	MovingImagePointer
typedef Superclass::MovingImageType	MovingImageType
typedef std::vector< MovingImageConstPointer >	MovingImageVectorType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef MultiInputImageToImageMetricBase	Self
typedef AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >	AdvancedTransformType
typedef BSplineOrder1TransformType::Pointer	BSplineOrder1TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >	BSplineOrder1TransformType
typedef BSplineOrder2TransformType::Pointer	BSplineOrder2TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >	BSplineOrder2TransformType
typedef BSplineOrder3TransformType::Pointer	BSplineOrder3TransformPointer
typedef AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >	BSplineOrder3TransformType
typedef AdvancedCombinationTransform< ScalarType, FixedImageDimension >	CombinationTransformType
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::CoordinateRepresentationType	CoordinateRepresentationType
typedef Superclass::DerivativeType	DerivativeType
typedef DerivativeType::ValueType	DerivativeValueType
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef FixedImageLimiterType::OutputType	FixedImageLimiterOutputType
typedef FixedImageLimiterType::Pointer	FixedImageLimiterPointer
typedef LimiterFunctionBase< RealType, FixedImageDimension >	FixedImageLimiterType
typedef Superclass::FixedImageMaskPointer	FixedImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedImageMaskSpatialObject2Type
typedef Superclass::FixedImageMaskType	FixedImageMaskType
typedef FixedImageType::PixelType	FixedImagePixelType
typedef FixedImageType::Pointer	FixedImagePointer
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::GradientImageFilterPointer	GradientImageFilterPointer
typedef Superclass::GradientImageFilterType	GradientImageFilterType
typedef Superclass::GradientImagePointer	GradientImagePointer
typedef Superclass::GradientImageType	GradientImageType
typedef Superclass::GradientPixelType	GradientPixelType
typedef vnl_sparse_matrix< HessianValueType >	HessianType
typedef DerivativeType::ValueType	HessianValueType
typedef ImageSamplerType::OutputVectorContainerPointer	ImageSampleContainerPointer
typedef ImageSamplerType::OutputVectorContainerType	ImageSampleContainerType
typedef ImageSamplerType::Pointer	ImageSamplerPointer
typedef ImageSamplerBase< FixedImageType >	ImageSamplerType
typedef Superclass::InputPointType	InputPointType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MeasureType	MeasureType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef FixedArray< double, Self::MovingImageDimension >	MovingImageDerivativeScalesType
typedef MovingImageLimiterType::OutputType	MovingImageLimiterOutputType
typedef MovingImageLimiterType::Pointer	MovingImageLimiterPointer
typedef LimiterFunctionBase< RealType, MovingImageDimension >	MovingImageLimiterType
typedef Superclass::MovingImageMaskPointer	MovingImageMaskPointer
typedef ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingImageMaskSpatialObject2Type
typedef Superclass::MovingImageMaskType	MovingImageMaskType
typedef Superclass::MovingImagePixelType	MovingImagePixelType
typedef MovingImageType::Pointer	MovingImagePointer
typedef MovingImageType::RegionType	MovingImageRegionType
typedef Superclass::MovingImageType	MovingImageType
typedef AdvancedTransformType::NumberOfParametersType	NumberOfParametersType
typedef Superclass::OutputPointType	OutputPointType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef Superclass::RealType	RealType
typedef TransformType::ScalarType	ScalarType
typedef AdvancedImageToImageMetric	Self
typedef ImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >	Superclass
typedef itk::PlatformMultiThreader	ThreaderType
typedef ThreaderType::WorkUnitInfo	ThreadInfoType
typedef Superclass::TransformJacobianType	TransformJacobianType
typedef Superclass::TransformParametersType	TransformParametersType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from elastix::MetricBase< TElastix >
typedef itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >	AdvancedMetricType
typedef Superclass::ConfigurationPointer	ConfigurationPointer
typedef Superclass::ConfigurationType	ConfigurationType
typedef ITKBaseType::ParametersValueType	CoordinateRepresentationType
typedef Superclass::ElastixPointer	ElastixPointer
typedef Superclass::ElastixType	ElastixType
typedef ElastixType::FixedImageType	FixedImageType
typedef itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	FixedPointSetType
typedef FixedImageType::PointType	FixedPointType
typedef FixedPointType::ValueType	FixedPointValueType
typedef AdvancedMetricType::ImageSamplerType	ImageSamplerBaseType
typedef itk::SingleValuedCostFunction	ITKBaseType
typedef ITKBaseType::MeasureType	MeasureType
typedef AdvancedMetricType::MovingImageDerivativeScalesType	MovingImageDerivativeScalesType
typedef ElastixType::MovingImageType	MovingImageType
typedef itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >	MovingPointSetType
typedef MovingImageType::PointType	MovingPointType
typedef MovingPointType::ValueType	MovingPointValueType
typedef Superclass::RegistrationPointer	RegistrationPointer
typedef Superclass::RegistrationType	RegistrationType
typedef MetricBase	Self
typedef BaseComponentSE< TElastix >	Superclass
Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef Configuration::Pointer	ConfigurationPointer
typedef Configuration	ConfigurationType
typedef itk::WeakPointer< ElastixType >	ElastixPointer
typedef TElastix	ElastixType
typedef RegistrationType *	RegistrationPointer
typedef ElastixType::RegistrationBaseType	RegistrationType
typedef BaseComponentSE	Self
typedef BaseComponent	Superclass

Public Member Functions
void	BeforeEachResolution (void) override
void	BeforeRegistration (void) override
	elxClassNameMacro ("KNNGraphAlphaMutualInformation")
virtual const char *	GetClassName () const
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
Public Member Functions inherited from itk::KNNGraphAlphaMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual const double &	GetAlpha ()
virtual const double &	GetAvoidDivisionBy ()
virtual const char *	GetClassName () const
void	GetDerivative (const TransformParametersType &parameters, DerivativeType &Derivative) const override
MeasureType	GetValue (const TransformParametersType &parameters) const override
void	GetValueAndDerivative (const TransformParametersType &parameters, MeasureType &Value, DerivativeType &Derivative) const override
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SetAlpha (double _arg)
void	SetANNbdTree (unsigned int bucketSize, std::string splittingRule, std::string shrinkingRule)
void	SetANNbdTree (unsigned int bucketSize, std::string splittingRuleFixed, std::string splittingRuleMoving, std::string splittingRuleJoint, std::string shrinkingRuleFixed, std::string shrinkingRuleMoving, std::string shrinkingRuleJoint)
void	SetANNBruteForceTree (void)
void	SetANNFixedRadiusTreeSearch (unsigned int kNearestNeighbors, double errorBound, double squaredRadius)
void	SetANNkDTree (unsigned int bucketSize, std::string splittingRule)
void	SetANNkDTree (unsigned int bucketSize, std::string splittingRuleFixed, std::string splittingRuleMoving, std::string splittingRuleJoint)
void	SetANNPriorityTreeSearch (unsigned int kNearestNeighbors, double errorBound)
void	SetANNStandardTreeSearch (unsigned int kNearestNeighbors, double errorBound)
virtual void	SetAvoidDivisionBy (double _arg)
Public Member Functions inherited from itk::MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual const char *	GetClassName () const
virtual const FixedImageType *	GetFixedImage (unsigned int pos) const
const FixedImageType *	GetFixedImage (void) const override
virtual FixedImageInterpolatorType *	GetFixedImageInterpolator (unsigned int pos) const
virtual FixedImageInterpolatorType *	GetFixedImageInterpolator (void) const
virtual FixedImageMaskType *	GetFixedImageMask (unsigned int pos) const
FixedImageMaskType *	GetFixedImageMask (void) const override
virtual const FixedImageRegionType &	GetFixedImageRegion (unsigned int pos) const
const FixedImageRegionType &	GetFixedImageRegion (void) const override
virtual InterpolatorType *	GetInterpolator (unsigned int pos) const
InterpolatorType *	GetInterpolator (void) const override
virtual bool	GetInterpolatorsAreBSpline () const
virtual const MovingImageType *	GetMovingImage (unsigned int pos) const
const MovingImageType *	GetMovingImage (void) const override
virtual MovingImageMaskType *	GetMovingImageMask (unsigned int pos) const
MovingImageMaskType *	GetMovingImageMask (void) const override
virtual unsigned int	GetNumberOfFixedImageInterpolators () const
virtual unsigned int	GetNumberOfFixedImageMasks () const
virtual unsigned int	GetNumberOfFixedImageRegions () const
virtual unsigned int	GetNumberOfFixedImages () const
virtual unsigned int	GetNumberOfInterpolators () const
virtual unsigned int	GetNumberOfMovingImageMasks () const
virtual unsigned int	GetNumberOfMovingImages () const
void	Initialize (void) override
	itkSetNumberOfMacro (FixedImage)
	itkSetNumberOfMacro (FixedImageInterpolator)
	itkSetNumberOfMacro (FixedImageMask)
	itkSetNumberOfMacro (FixedImageRegion)
	itkSetNumberOfMacro (Interpolator)
	itkSetNumberOfMacro (MovingImage)
	itkSetNumberOfMacro (MovingImageMask)
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
void	SetFixedImage (const FixedImageType *_arg) override
virtual void	SetFixedImage (const FixedImageType *_arg, unsigned int pos)
virtual void	SetFixedImageInterpolator (FixedImageInterpolatorType *_arg)
virtual void	SetFixedImageInterpolator (FixedImageInterpolatorType *_arg, unsigned int pos)
void	SetFixedImageMask (FixedImageMaskType *_arg) override
virtual void	SetFixedImageMask (FixedImageMaskType *_arg, unsigned int pos)
void	SetFixedImageRegion (const FixedImageRegionType _arg) override
virtual void	SetFixedImageRegion (const FixedImageRegionType _arg, unsigned int pos)
void	SetInterpolator (InterpolatorType *_arg) override
virtual void	SetInterpolator (InterpolatorType *_arg, unsigned int pos)
void	SetMovingImage (const MovingImageType *_arg) override
virtual void	SetMovingImage (const MovingImageType *_arg, unsigned int pos)
void	SetMovingImageMask (MovingImageMaskType *_arg) override
virtual void	SetMovingImageMask (MovingImageMaskType *_arg, unsigned int pos)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const char *	GetClassName () const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
virtual double	GetFixedLimitRangeRatio () const
virtual ImageSamplerType *	GetImageSampler (void) const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
virtual void	GetSelfHessian (const TransformParametersType &parameters, HessianType &H) const
const AdvancedTransformType *	GetTransform (void) const override
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
void	Initialize (void) override
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetNumberOfWorkUnits (ThreadIdType numberOfThreads)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()
Public Member Functions inherited from elastix::MetricBase< TElastix >
void	AfterEachIterationBase (void) override
void	BeforeEachResolutionBase (void) override
virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler (void) const
virtual bool	GetAdvancedMetricUseImageSampler (void) const
virtual ITKBaseType *	GetAsITKBaseType (void)
virtual const ITKBaseType *	GetAsITKBaseType (void) const
virtual const char *	GetClassName () const
virtual MeasureType	GetCurrentExactMetricValue (void) const
virtual bool	GetShowExactMetricValue (void) const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SelectNewSamples (void)
virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
ConfigurationType *	GetConfiguration (void) const
ElastixType *	GetElastix (void) const
RegistrationPointer	GetRegistration (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponentSE)
void	SetConfiguration (ConfigurationType *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)
virtual void	AfterEachIterationBase (void)
virtual void	AfterEachResolution (void)
virtual void	AfterEachResolutionBase (void)
virtual void	AfterRegistration (void)
virtual void	AfterRegistrationBase (void)
virtual int	BeforeAll (void)
virtual int	BeforeAllBase (void)
virtual void	BeforeEachResolution (void)
virtual void	BeforeEachResolutionBase (void)
virtual void	BeforeRegistration (void)
virtual void	BeforeRegistrationBase (void)
virtual const char *	elxGetClassName (void) const
const char *	GetComponentLabel (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::KNNGraphAlphaMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
static std::string	ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision)
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Member Functions
	KNNGraphAlphaMutualInformationMetric ()
	~KNNGraphAlphaMutualInformationMetric () override
Protected Member Functions inherited from itk::KNNGraphAlphaMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
	KNNGraphAlphaMutualInformationImageToImageMetric ()
void	PrintSelf (std::ostream &os, Indent indent) const override
	~KNNGraphAlphaMutualInformationImageToImageMetric () override
Protected Member Functions inherited from itk::MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
virtual void	CheckForBSplineInterpolators (void)
bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const override
void	InitializeImageSampler (void) override
bool	IsInsideMovingMask (const MovingImagePointType &mappedPoint) const override
	MultiInputImageToImageMetricBase ()
	~MultiInputImageToImageMetricBase () override
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &value) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const
virtual void	CheckForAdvancedTransform (void)
virtual void	CheckForBSplineInterpolator (void)
virtual void	CheckForBSplineTransform (void) const
virtual void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
virtual bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
virtual void	InitializeImageSampler (void)
virtual void	InitializeLimiters (void)
virtual void	InitializeThreadingParameters (void) const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback (void) const
void	LaunchGetValueThreaderCallback (void) const
void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType threadID)
virtual void	ThreadedGetValueAndDerivative (ThreadIdType threadID)
virtual bool	TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const
	~AdvancedImageToImageMetric () override
Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)
	MetricBase ()
	~MetricBase () override
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Member Functions
	KNNGraphAlphaMutualInformationMetric (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Types inherited from itk::MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef Superclass::BSplineInterpolatorType	BSplineInterpolatorType
typedef std::vector< BSplineInterpolatorPointer >	BSplineInterpolatorVectorType
typedef Superclass::MovingImageContinuousIndexType	MovingImageContinuousIndexType
typedef Superclass::MovingImageDerivativeType	MovingImageDerivativeType
typedef Superclass::MovingImageIndexType	MovingImageIndexType
typedef Superclass::MovingImagePointType	MovingImagePointType
Protected Types inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
typedef BSplineInterpolatorFloatType::Pointer	BSplineInterpolatorFloatPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >	BSplineInterpolatorFloatType
typedef BSplineInterpolatorType::Pointer	BSplineInterpolatorPointer
typedef BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	BSplineInterpolatorType
typedef CentralDifferenceGradientFilterType::Pointer	CentralDifferenceGradientFilterPointer
typedef GradientImageFilter< MovingImageType, RealType, RealType >	CentralDifferenceGradientFilterType
typedef FixedImageType::IndexType	FixedImageIndexType
typedef FixedImageIndexType::IndexValueType	FixedImageIndexValueType
typedef TransformType::InputPointType	FixedImagePointType
typedef LinearInterpolatorType::Pointer	LinearInterpolatorPointer
typedef AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >	LinearInterpolatorType
typedef InterpolatorType::ContinuousIndexType	MovingImageContinuousIndexType
typedef BSplineInterpolatorType::CovariantVectorType	MovingImageDerivativeType
typedef MovingImageType::IndexType	MovingImageIndexType
typedef TransformType::OutputPointType	MovingImagePointType
typedef AdvancedTransformType::NonZeroJacobianIndicesType	NonZeroJacobianIndicesType
typedef ReducedBSplineInterpolatorType::Pointer	ReducedBSplineInterpolatorPointer
typedef ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >	ReducedBSplineInterpolatorType
Protected Types inherited from elastix::MetricBase< TElastix >
typedef ExactMetricImageSamplerType::Pointer	ExactMetricImageSamplerPointer
typedef itk::ImageGridSampler< FixedImageType >	ExactMetricImageSamplerType
typedef ExactMetricImageSamplerType::SampleGridSpacingType	ExactMetricSampleGridSpacingType
typedef ITKBaseType::ParametersType	ParametersType
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::KNNGraphAlphaMutualInformationImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
double	m_Alpha
double	m_AvoidDivisionBy
BinaryKNNTreePointer	m_BinaryKNNTreeFixed
BinaryKNNTreePointer	m_BinaryKNNTreeJoint
BinaryKNNTreePointer	m_BinaryKNNTreeMoving
BinaryKNNTreeSearchPointer	m_BinaryKNNTreeSearcherFixed
BinaryKNNTreeSearchPointer	m_BinaryKNNTreeSearcherJoint
BinaryKNNTreeSearchPointer	m_BinaryKNNTreeSearcherMoving
Protected Attributes inherited from itk::MultiInputImageToImageMetricBase< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
BSplineInterpolatorVectorType	m_BSplineInterpolatorVector
FixedImageInterpolatorVectorType	m_FixedImageInterpolatorVector
FixedImageMaskVectorType	m_FixedImageMaskVector
FixedImageRegionVectorType	m_FixedImageRegionVector
FixedImageVectorType	m_FixedImageVector
bool	m_InterpolatorsAreBSpline
InterpolatorVectorType	m_InterpolatorVector
MovingImageMaskVectorType	m_MovingImageMaskVector
MovingImageVectorType	m_MovingImageVector
Protected Attributes inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType >
AdvancedTransformType::Pointer	m_AdvancedTransform
BSplineInterpolatorPointer	m_BSplineInterpolator
BSplineInterpolatorFloatPointer	m_BSplineInterpolatorFloat
CentralDifferenceGradientFilterPointer	m_CentralDifferenceGradientFilter
FixedImageLimiterPointer	m_FixedImageLimiter
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
double	m_FixedLimitRangeRatio
AlignedGetValueAndDerivativePerThreadStruct *	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
AlignedGetValuePerThreadStruct *	m_GetValuePerThreadVariables
ThreadIdType	m_GetValuePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
bool	m_InterpolatorIsBSpline
bool	m_InterpolatorIsBSplineFloat
bool	m_InterpolatorIsLinear
bool	m_InterpolatorIsReducedBSpline
LinearInterpolatorPointer	m_LinearInterpolator
MovingImageLimiterPointer	m_MovingImageLimiter
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
double	m_MovingLimitRangeRatio
ReducedBSplineInterpolatorPointer	m_ReducedBSplineInterpolator
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsAdvanced
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
bool	m_UseOpenMP
Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue
unsigned int	m_ExactMetricEachXNumberOfIterations
ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing
ExactMetricImageSamplerPointer	m_ExactMetricSampler
bool	m_ShowExactMetricValue
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration {}
ElastixPointer	m_Elastix {}
RegistrationPointer	m_Registration {}

Member Typedef Documentation

ConfigurationPointer

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ConfigurationPointer

Definition at line 137 of file elxKNNGraphAlphaMutualInformationMetric.h.

ConfigurationType

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ConfigurationType

Definition at line 136 of file elxKNNGraphAlphaMutualInformationMetric.h.

ConstPointer

template<class TElastix >

typedef itk::SmartPointer< const Self > elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ConstPointer

Definition at line 98 of file elxKNNGraphAlphaMutualInformationMetric.h.

DerivativeType

template<class TElastix >

typedef Superclass1::DerivativeType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::DerivativeType

Definition at line 119 of file elxKNNGraphAlphaMutualInformationMetric.h.

ElastixPointer

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ElastixPointer

Definition at line 135 of file elxKNNGraphAlphaMutualInformationMetric.h.

ElastixType

template<class TElastix >

typedef Superclass2::ElastixType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ElastixType

Typedef's inherited from Elastix.

Definition at line 134 of file elxKNNGraphAlphaMutualInformationMetric.h.

FixedFeatureImageType

template<class TElastix >

typedef FixedImageType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::FixedFeatureImageType

Typedefs for feature images.

Definition at line 143 of file elxKNNGraphAlphaMutualInformationMetric.h.

FixedImageConstPointer

template<class TElastix >

typedef Superclass1::FixedImageConstPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::FixedImageConstPointer

Definition at line 123 of file elxKNNGraphAlphaMutualInformationMetric.h.

FixedImageType

template<class TElastix >

typedef Superclass1::FixedImageType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::FixedImageType

Definition at line 121 of file elxKNNGraphAlphaMutualInformationMetric.h.

InterpolatorType

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::InterpolatorType

Definition at line 117 of file elxKNNGraphAlphaMutualInformationMetric.h.

ITKBaseType

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ITKBaseType

Definition at line 140 of file elxKNNGraphAlphaMutualInformationMetric.h.

MeasureType

template<class TElastix >

typedef Superclass1::MeasureType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::MeasureType

Definition at line 118 of file elxKNNGraphAlphaMutualInformationMetric.h.

MovingFeatureImageType

template<class TElastix >

typedef MovingImageType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::MovingFeatureImageType

Definition at line 144 of file elxKNNGraphAlphaMutualInformationMetric.h.

MovingImageConstPointer

template<class TElastix >

typedef Superclass1::MovingImageConstPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::MovingImageConstPointer

Definition at line 124 of file elxKNNGraphAlphaMutualInformationMetric.h.

MovingImageType

template<class TElastix >

typedef Superclass1::MovingImageType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::MovingImageType

Definition at line 122 of file elxKNNGraphAlphaMutualInformationMetric.h.

ParametersType

template<class TElastix >

typedef Superclass1::ParametersType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::ParametersType

Definition at line 120 of file elxKNNGraphAlphaMutualInformationMetric.h.

Pointer

template<class TElastix >

typedef itk::SmartPointer< Self > elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::Pointer

Definition at line 97 of file elxKNNGraphAlphaMutualInformationMetric.h.

RegistrationPointer

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::RegistrationPointer

Definition at line 139 of file elxKNNGraphAlphaMutualInformationMetric.h.

RegistrationType

template<class TElastix >

typedef Superclass2::RegistrationType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::RegistrationType

Definition at line 138 of file elxKNNGraphAlphaMutualInformationMetric.h.

Self

template<class TElastix >

typedef KNNGraphAlphaMutualInformationMetric elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::Self

Standard ITK-stuff.

Definition at line 92 of file elxKNNGraphAlphaMutualInformationMetric.h.

Superclass1

template<class TElastix >

typedef itk::KNNGraphAlphaMutualInformationImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType > elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::Superclass1

Definition at line 95 of file elxKNNGraphAlphaMutualInformationMetric.h.

Superclass2

template<class TElastix >

typedef MetricBase< TElastix > elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::Superclass2

Definition at line 96 of file elxKNNGraphAlphaMutualInformationMetric.h.

TransformJacobianType

template<class TElastix >

typedef Superclass1::TransformJacobianType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::TransformJacobianType

Definition at line 116 of file elxKNNGraphAlphaMutualInformationMetric.h.

TransformPointer

template<class TElastix >

typedef Superclass1::TransformPointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::TransformPointer

Definition at line 115 of file elxKNNGraphAlphaMutualInformationMetric.h.

TransformType

template<class TElastix >

typedef Superclass1::TransformType elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::TransformType

Typedefs inherited from the superclass.

Definition at line 114 of file elxKNNGraphAlphaMutualInformationMetric.h.

Constructor & Destructor Documentation

KNNGraphAlphaMutualInformationMetric() [1/2]

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::KNNGraphAlphaMutualInformationMetric ( )

inlineprotected

The constructor.

Definition at line 177 of file elxKNNGraphAlphaMutualInformationMetric.h.

~KNNGraphAlphaMutualInformationMetric()

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::~KNNGraphAlphaMutualInformationMetric ( )

inlineoverrideprotected

The destructor.

Definition at line 179 of file elxKNNGraphAlphaMutualInformationMetric.h.

KNNGraphAlphaMutualInformationMetric() [2/2]

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::KNNGraphAlphaMutualInformationMetric ( const Self &  )

private

The private constructor.

Member Function Documentation

BeforeEachResolution()

template<class TElastix >

void elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::BeforeEachResolution ( void  )

overridevirtual

Execute stuff before each new pyramid resolution:

• Set the tree type.
• Set the bucket size, if appropriate.
• Set the splitting rule, if appropriate.
• Set the shrinking rule, if appropriate.
• Set the tree searcher type.
• Set the k NearestNeighbours.
• Set the error bound epsilon for ANN search.
• Set the squared search radius, if appropriate.

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

void elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::BeforeRegistration ( void  )

overridevirtual

Execute stuff before the registration:

• Set the alpha from alpha - MI.
• Set the number of fixed feature images.
• Set the number of moving feature images.
• Set the fixed feature images filenames.
• Set the moving feature images filenames.
• Set the spline orders of the fixed feature interpolators.
• Set the spline orders of the moving feature interpolators.

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::elxClassNameMacro

(

"KNNGraphAlphaMutualInformation"

)

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "KNNGraphAlphaMutualInformation")

GetClassName()

template<class TElastix >

virtual const char * elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::MetricBase< TElastix >.

Initialize()

template<class TElastix >

void elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::Initialize ( void  )

override

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

New()

template<class TElastix >

static Pointer elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TElastix >

void elastix::KNNGraphAlphaMutualInformationMetric< TElastix >::operator= ( const Self &  )

private

The private copy constructor.