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#include <elxAdvancedKappaStatisticMetric.h>
An metric based on the itk::AdvancedKappaStatisticImageToImageMetric.
The parameters used in this class are:
Metric: Select this metric as follows:
(Metric "AdvancedKappaStatistic")
UseComplement: Bool to use the complement of the metric or not.
If true, the 1 - KappaStatistic is returned, which is useful since most optimizers search by default for a minimum.
(UseComplement "true")
The default value is true.
ForeGroundvalue: the overlap of structures with this value is calculated.
(ForeGroundvalue 3.5)
The default value is 1.0.
Definition at line 49 of file elxAdvancedKappaStatisticMetric.h.
Static Public Member Functions | |
static Pointer | New () |
Static Public Member Functions inherited from itk::AdvancedKappaStatisticImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType > | |
static Pointer | New () |
Static Public Member Functions inherited from elastix::BaseComponent | |
static std::string | ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision) |
static void | InitializeElastixExecutable () |
static bool | IsElastixLibrary () |
Protected Member Functions | |
AdvancedKappaStatisticMetric () | |
~AdvancedKappaStatisticMetric () override | |
Protected Member Functions inherited from itk::AdvancedKappaStatisticImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType > | |
AdvancedKappaStatisticImageToImageMetric () | |
void | AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const override |
void | InitializeThreadingParameters (void) const override |
void | PrintSelf (std::ostream &os, Indent indent) const override |
void | ThreadedGetValueAndDerivative (ThreadIdType threadID) override |
void | UpdateValueAndDerivativeTerms (const RealType &fixedImageValue, const RealType &movingImageValue, std::vcl_size_t &fixedForegroundArea, std::vcl_size_t &movingForegroundArea, std::vcl_size_t &intersection, const DerivativeType &imageJacobian, const NonZeroJacobianIndicesType &nzji, DerivativeType &sum1, DerivativeType &sum2) const |
~AdvancedKappaStatisticImageToImageMetric () override | |
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< MetricBase< TElastix >::FixedImageType, MetricBase< TElastix >::MovingImageType > | |
AdvancedImageToImageMetric () | |
virtual void | AfterThreadedGetValue (MeasureType &value) const |
virtual void | AfterThreadedGetValueAndDerivative (MeasureType &value, DerivativeType &derivative) const |
virtual void | CheckForAdvancedTransform (void) |
virtual void | CheckForBSplineInterpolator (void) |
virtual void | CheckForBSplineTransform (void) const |
virtual void | CheckNumberOfSamples (unsigned long wanted, unsigned long found) const |
virtual bool | EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const |
virtual bool | EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const |
virtual void | EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const |
virtual void | InitializeImageSampler (void) |
virtual void | InitializeLimiters (void) |
virtual void | InitializeThreadingParameters (void) const |
virtual bool | IsInsideMovingMask (const MovingImagePointType &point) const |
itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct) | |
itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValuePerThreadStruct, AlignedGetValuePerThreadStruct) | |
itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct) | |
itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValuePerThreadStruct, PaddedGetValuePerThreadStruct) | |
void | LaunchGetValueAndDerivativeThreaderCallback (void) const |
void | LaunchGetValueThreaderCallback (void) const |
void | PrintSelf (std::ostream &os, Indent indent) const override |
virtual void | SetUseFixedImageLimiter (bool _arg) |
virtual void | SetUseImageSampler (bool _arg) |
virtual void | SetUseMovingImageLimiter (bool _arg) |
virtual void | ThreadedGetValue (ThreadIdType threadID) |
virtual void | ThreadedGetValueAndDerivative (ThreadIdType threadID) |
virtual bool | TransformPoint (const FixedImagePointType &fixedImagePoint, MovingImagePointType &mappedPoint) const |
~AdvancedImageToImageMetric () override | |
Protected Member Functions inherited from elastix::MetricBase< TElastix > | |
virtual MeasureType | GetExactValue (const ParametersType ¶meters) |
MetricBase () | |
~MetricBase () override | |
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix > | |
BaseComponentSE ()=default | |
~BaseComponentSE () override=default | |
Protected Member Functions inherited from elastix::BaseComponent | |
BaseComponent ()=default | |
virtual | ~BaseComponent ()=default |
Private Member Functions | |
AdvancedKappaStatisticMetric (const Self &) | |
void | operator= (const Self &) |
typedef Superclass2::ConfigurationPointer elastix::AdvancedKappaStatisticMetric< TElastix >::ConfigurationPointer |
Definition at line 137 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::ConfigurationType elastix::AdvancedKappaStatisticMetric< TElastix >::ConfigurationType |
Definition at line 136 of file elxAdvancedKappaStatisticMetric.h.
typedef itk::SmartPointer< const Self > elastix::AdvancedKappaStatisticMetric< TElastix >::ConstPointer |
Definition at line 65 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::CoordinateRepresentationType elastix::AdvancedKappaStatisticMetric< TElastix >::CoordinateRepresentationType |
Typedefs from the superclass.
Definition at line 81 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::DerivativeType elastix::AdvancedKappaStatisticMetric< TElastix >::DerivativeType |
Definition at line 107 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::ElastixPointer elastix::AdvancedKappaStatisticMetric< TElastix >::ElastixPointer |
Definition at line 135 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::ElastixType elastix::AdvancedKappaStatisticMetric< TElastix >::ElastixType |
Typedef's inherited from Elastix.
Definition at line 134 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageConstPointer elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageConstPointer |
Definition at line 86 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageLimiterOutputType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageLimiterOutputType |
Definition at line 119 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageLimiterType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageLimiterType |
Definition at line 116 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageMaskPointer elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageMaskPointer |
Definition at line 103 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageMaskType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageMaskType |
Definition at line 102 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImagePixelType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImagePixelType |
Definition at line 109 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageRegionType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageRegionType |
Definition at line 87 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::FixedImageType elastix::AdvancedKappaStatisticMetric< TElastix >::FixedImageType |
Definition at line 85 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::GradientImageFilterPointer elastix::AdvancedKappaStatisticMetric< TElastix >::GradientImageFilterPointer |
Definition at line 101 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::GradientImageFilterType elastix::AdvancedKappaStatisticMetric< TElastix >::GradientImageFilterType |
Definition at line 100 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::GradientImagePointer elastix::AdvancedKappaStatisticMetric< TElastix >::GradientImagePointer |
Definition at line 99 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::GradientImageType elastix::AdvancedKappaStatisticMetric< TElastix >::GradientImageType |
Definition at line 98 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::GradientPixelType elastix::AdvancedKappaStatisticMetric< TElastix >::GradientPixelType |
Definition at line 97 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::ImageSampleContainerPointer elastix::AdvancedKappaStatisticMetric< TElastix >::ImageSampleContainerPointer |
Definition at line 115 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::ImageSampleContainerType elastix::AdvancedKappaStatisticMetric< TElastix >::ImageSampleContainerType |
Definition at line 113 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::ImageSamplerPointer elastix::AdvancedKappaStatisticMetric< TElastix >::ImageSamplerPointer |
Definition at line 112 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::ImageSamplerType elastix::AdvancedKappaStatisticMetric< TElastix >::ImageSamplerType |
Definition at line 111 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::InputPointType elastix::AdvancedKappaStatisticMetric< TElastix >::InputPointType |
Definition at line 90 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::InterpolatorPointer elastix::AdvancedKappaStatisticMetric< TElastix >::InterpolatorPointer |
Definition at line 95 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::InterpolatorType elastix::AdvancedKappaStatisticMetric< TElastix >::InterpolatorType |
Definition at line 94 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::ITKBaseType elastix::AdvancedKappaStatisticMetric< TElastix >::ITKBaseType |
Definition at line 140 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MeasureType elastix::AdvancedKappaStatisticMetric< TElastix >::MeasureType |
Definition at line 106 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageConstPointer elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageConstPointer |
Definition at line 84 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageDerivativeScalesType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageDerivativeScalesType |
Definition at line 123 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageLimiterOutputType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageLimiterOutputType |
Definition at line 121 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageLimiterType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageLimiterType |
Definition at line 117 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageMaskPointer elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageMaskPointer |
Definition at line 105 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageMaskType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageMaskType |
Definition at line 104 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImagePixelType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImagePixelType |
Definition at line 83 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageRegionType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageRegionType |
Definition at line 110 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::MovingImageType elastix::AdvancedKappaStatisticMetric< TElastix >::MovingImageType |
Definition at line 82 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::OutputPointType elastix::AdvancedKappaStatisticMetric< TElastix >::OutputPointType |
Definition at line 91 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::ParametersType elastix::AdvancedKappaStatisticMetric< TElastix >::ParametersType |
Definition at line 108 of file elxAdvancedKappaStatisticMetric.h.
typedef itk::SmartPointer< Self > elastix::AdvancedKappaStatisticMetric< TElastix >::Pointer |
Definition at line 64 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::RealType elastix::AdvancedKappaStatisticMetric< TElastix >::RealType |
Definition at line 96 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::RegistrationPointer elastix::AdvancedKappaStatisticMetric< TElastix >::RegistrationPointer |
Definition at line 139 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass2::RegistrationType elastix::AdvancedKappaStatisticMetric< TElastix >::RegistrationType |
Definition at line 138 of file elxAdvancedKappaStatisticMetric.h.
typedef AdvancedKappaStatisticMetric elastix::AdvancedKappaStatisticMetric< TElastix >::Self |
Standard ITK-stuff.
Definition at line 59 of file elxAdvancedKappaStatisticMetric.h.
typedef itk::AdvancedKappaStatisticImageToImageMetric< typename MetricBase< TElastix >::FixedImageType, typename MetricBase< TElastix >::MovingImageType > elastix::AdvancedKappaStatisticMetric< TElastix >::Superclass1 |
Definition at line 62 of file elxAdvancedKappaStatisticMetric.h.
typedef MetricBase< TElastix > elastix::AdvancedKappaStatisticMetric< TElastix >::Superclass2 |
Definition at line 63 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::TransformJacobianType elastix::AdvancedKappaStatisticMetric< TElastix >::TransformJacobianType |
Definition at line 93 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::TransformParametersType elastix::AdvancedKappaStatisticMetric< TElastix >::TransformParametersType |
Definition at line 92 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::TransformPointer elastix::AdvancedKappaStatisticMetric< TElastix >::TransformPointer |
Definition at line 89 of file elxAdvancedKappaStatisticMetric.h.
typedef Superclass1::TransformType elastix::AdvancedKappaStatisticMetric< TElastix >::TransformType |
Definition at line 88 of file elxAdvancedKappaStatisticMetric.h.
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inlineprotected |
The constructor.
Definition at line 157 of file elxAdvancedKappaStatisticMetric.h.
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inlineoverrideprotected |
The destructor.
Definition at line 159 of file elxAdvancedKappaStatisticMetric.h.
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private |
The private constructor.
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overridevirtual |
Do some things before registration:
Reimplemented from elastix::BaseComponent.
elastix::AdvancedKappaStatisticMetric< TElastix >::elxClassNameMacro | ( | "AdvancedKappaStatistic" | ) |
Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "AdvancedKappaStatistic")
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virtual |
Run-time type information (and related methods).
Reimplemented from elastix::MetricBase< TElastix >.
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override |
Sets up a timer to measure the initialization time and calls the Superclass' implementation.
elastix::AdvancedKappaStatisticMetric< TElastix >::itkStaticConstMacro | ( | FixedImageDimension | , |
unsigned int | , | ||
FixedImageType::ImageDimension | |||
) |
The fixed image dimension.
elastix::AdvancedKappaStatisticMetric< TElastix >::itkStaticConstMacro | ( | MovingImageDimension | , |
unsigned int | , | ||
MovingImageType::ImageDimension | |||
) |
The moving image dimension.
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static |
Method for creation through the object factory.
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private |
The private copy constructor.
Generated on 1667476801 for elastix by 1.9.4 |