Hierarchy For Package phase

Package Hierarchies:

• All Packages

Class Hierarchy

• java.lang.Object
  • phase.BasicPhaseStates
  • phase.CodedSteps
  • phase.EstPhase
  • phase.FixedPhaseData
  • phase.FwdPbwtPhaser
  • phase.HmmParamData
  • phase.HmmStateProbs
  • phase.HmmUpdater
  • phase.Ibs2
  • phase.Ibs2Markers
  • phase.Ibs2Sets
  • phase.LowFreqPbwtPhaseIbs
  • phase.LowFreqPhaseIbs
  • phase.LowFreqPhaseStates
  • phase.MarkerCluster
  • phase.ParamEstimates
  • phase.PbwtIbsData
  • phase.PbwtPhaseIbs
  • phase.PbwtPhaser
  • phase.PbwtRecPhaser
  • phase.PhaseBaum1
  • phase.PhaseData
  • phase.PhaseLS
  • phase.RevPbwtPhaser
  • phase.SamplePhase
  • phase.SampleSeg (implements java.lang.Comparable<T>, beagleutil.IntInterval)
  • phase.Stage2Baum
  • phase.Stage2Haps