| AsIsBref3Writer |
Class AsIsBref3Writer writes VCF data with phased, non-missing
genotypes to a binary reference format v3 (bref) file.
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| Bref3 |
Class Bref3 converts files in VCF format into
bref version 3 format.
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| Bref3It |
Class Bref3It represents an iterator whose next() which
returns records from a bref version 3 file.
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| Bref3Reader |
Class Bref3Reader contains methods for reading a bref 3
(binary reference format) file.
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| BrefBlock |
Class BrefBlock represents starting chromosome coordinates and
file offset for the start of a binary reference format (bref) data block.
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| CompressBref3Writer |
Class CompressBref3Writer writes phased, non-missing genotypes
to a binary reference format v3 (bref) file.
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| SeqCoder3 |
Class SeqCoder3 compresses a sequence of allele-coded
RefGTRec objects.
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| UnBref3 |
Class UnBref3 converts files in bref version 3 format
into VCF format.
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