Package org.forester.ws.wabi
Class TxSearch
java.lang.Object
org.forester.ws.wabi.TxSearch
This is to access the Web API for Biology (WABI) at DDBJ.
See: http://xml.nig.ac.jp/
Service Description:
TXSearch is a retrieval system for a Taxonomy Database which
was unified by DDBJ, GenBank and EMBL, which is developed by DDBJ.
See: http://xml.nig.ac.jp/wabi/Method?serviceName=TxSearch&mode=methodList
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Nested Class Summary
Nested ClassesModifier and TypeClassDescriptionstatic enumstatic enumstatic enum -
Constructor Summary
Constructors -
Method Summary
Modifier and TypeMethodDescriptionstatic String[]getLineage(String result) static StringgetTaxonomicRank(String result) static Stringstatic Stringstatic voidstatic StringsearchLineage(List<String> queries, List<TxSearch.RANKS> ranks) static StringsearchLineage(List<String> queries, List<TxSearch.RANKS> ranks, String superkingdom) static StringsearchParam(String tx_name, TxSearch.TAX_NAME_CLASS tx_name_class, TxSearch.TAX_RANK tx_rank, int tx_rmax, boolean as_scientific_name) static StringsearchSimple(String tx_name)
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Constructor Details
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TxSearch
public TxSearch()
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Method Details
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getLineage
- Throws:
IOException
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getTaxonomicRank
- Throws:
IOException
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getTxId
- Throws:
IOException
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getTxName
- Throws:
IOException
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main
- Throws:
IOException
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searchLineage
public static String searchLineage(List<String> queries, List<TxSearch.RANKS> ranks) throws IOException - Throws:
IOException
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searchLineage
public static String searchLineage(List<String> queries, List<TxSearch.RANKS> ranks, String superkingdom) throws IOException - Throws:
IOException
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searchParam
public static String searchParam(String tx_name, TxSearch.TAX_NAME_CLASS tx_name_class, TxSearch.TAX_RANK tx_rank, int tx_rmax, boolean as_scientific_name) throws IOException - Throws:
IOException
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searchSimple
- Throws:
IOException
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