ClinicalTrialAnnotate.cxx

/*=========================================================================
 
  Program: GDCM (Grassroots DICOM). A DICOM library
 
  Copyright (c) 2006-2011 Mathieu Malaterre
  All rights reserved.
  See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details.
 
     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.
 
=========================================================================*/
/*
 * Dummy implementation of C.7.1.3 Clinical Trial Subject Module
 *
 * Usage:
 *  ClinicalTrialAnnotate gdcmData/012345.002.050.dcm out.dcm
 */
 
#include "gdcmReader.h"
#include "gdcmWriter.h"
#include "gdcmAnonymizer.h"
 
int main(int argc, char *argv[])
{
  if( argc < 3 )
    {
    std::cerr << argv[0] << " input.dcm output.dcm" << std::endl;
    return 1;
    }
  const char *filename = argv[1];
  const char *outfilename = argv[2];
 
  gdcm::Reader reader;
  reader.SetFileName( filename );
  if( !reader.Read() )
    {
    std::cerr << "Could not read: " << filename << std::endl;
    return 1;
    }
 
  // The output of gdcm::Reader is a gdcm::File
  //gdcm::File &file = reader.GetFile();
 
  // the dataset is the the set of element we are interested in:
  //gdcm::DataSet &ds = file.GetDataSet();
 
  gdcm::Anonymizer ano;
  ano.SetFile( reader.GetFile() );
  ano.RemoveGroupLength();
  ano.RemovePrivateTags();
 
  // PS 3.3 - 2008
  // C.7.1.3 Clinical Trial Subject Module
  // <entry group="0012" element="0010" vr="LO" vm="1" name="Clinical Trial Sponsor Name"/>
  ano.Replace( gdcm::Tag(0x12,0x10), "BigCompany name" );
  // <entry group="0012" element="0020" vr="LO" vm="1" name="Clinical Trial Protocol ID"/>
  ano.Replace( gdcm::Tag(0x12,0x20), "My Clinical Trial Protocol ID" );
  // <entry group="0012" element="0021" vr="LO" vm="1" name="Clinical Trial Protocol Name"/>
  ano.Replace( gdcm::Tag(0x12,0x21), "My Clinical Trial Protocol Name" );
  // <entry group="0012" element="0030" vr="LO" vm="1" name="Clinical Trial Site ID"/>
  ano.Replace( gdcm::Tag(0x12,0x30), "My Clinical Trial Site ID" );
  // <entry group="0012" element="0031" vr="LO" vm="1" name="Clinical Trial Site Name"/>
  ano.Replace( gdcm::Tag(0x12,0x31), "My Clinical Trial Site Name" );
  // <entry group="0012" element="0040" vr="LO" vm="1" name="Clinical Trial Subject ID"/>
  ano.Replace( gdcm::Tag(0x12,0x40), "My Clinical Trial Subject ID" );
  // <entry group="0012" element="0042" vr="LO" vm="1" name="Clinical Trial Subject Reading ID"/>
  ano.Replace( gdcm::Tag(0x12,0x42), "My Clinical Trial Subject Reading ID" );
 
 
  gdcm::Writer writer;
  writer.SetFile( reader.GetFile() );
  writer.SetFileName( outfilename );
  if( !writer.Write() )
    {
    return 1;
    }
 
  return 0;
}