elxTransformixMain.h

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/*=========================================================================
 *
 *  Copyright UMC Utrecht and contributors
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *        http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef __elxTransformixMain_H_
#define __elxTransformixMain_H_
 
#include "elxElastixMain.h"
 
namespace elastix
{
class TransformixMain : public ElastixMain
{
public:
 
  typedef TransformixMain                 Self;
  typedef ElastixMain                     Superclass;
  typedef itk::SmartPointer< Self >       Pointer;
  typedef itk::SmartPointer< const Self > ConstPointer;
 
  itkNewMacro( Self );
 
  itkTypeMacro( TransformixMain, ElastixMain );
 
  typedef Superclass::ObjectType        ObjectType;
  typedef Superclass::ObjectPointer     ObjectPointer;
  typedef Superclass::DataObjectType    DataObjectType;
  typedef Superclass::DataObjectPointer DataObjectPointer;
 
  typedef Superclass::ElastixBaseType            ElastixBaseType;
  typedef Superclass::ConfigurationType          ConfigurationType;
  typedef Superclass::ArgumentMapType            ArgumentMapType;
  typedef Superclass::ConfigurationPointer       ConfigurationPointer;
  typedef Superclass::ObjectContainerType        ObjectContainerType;
  typedef Superclass::DataObjectContainerType    DataObjectContainerType;
  typedef Superclass::ObjectContainerPointer     ObjectContainerPointer;
  typedef Superclass::DataObjectContainerPointer DataObjectContainerPointer;
 
  typedef Superclass::ComponentDatabaseType    ComponentDatabaseType;
  typedef Superclass::ComponentDatabasePointer ComponentDatabasePointer;
  typedef Superclass::PtrToCreator             PtrToCreator;
  typedef Superclass::ComponentDescriptionType ComponentDescriptionType;
  typedef Superclass::PixelTypeDescriptionType PixelTypeDescriptionType;
  typedef Superclass::ImageDimensionType       ImageDimensionType;
  typedef Superclass::DBIndexType              DBIndexType;
 
  typedef Superclass::ComponentLoaderType    ComponentLoaderType;
  typedef Superclass::ComponentLoaderPointer ComponentLoaderPointer;
 
  typedef Superclass::ParameterMapType ParameterMapType;
 
  int Run( void ) override;
 
  int Run( const ArgumentMapType & argmap ) override;
 
  int Run( const ArgumentMapType & argmap, const ParameterMapType & inputMap ) override;
 
  virtual int Run( const ArgumentMapType & argmap, const std::vector< ParameterMapType > & inputMaps );
 
  virtual void SetInputImageContainer(
    DataObjectContainerType * inputImageContainer );
 
protected:
 
  TransformixMain(){}
  ~TransformixMain() override;
 
  int InitDBIndex( void ) override;
 
private:
 
  TransformixMain( const Self & ); // purposely not implemented
  void operator=( const Self & );  // purposely not implemented
 
};
 
} // end namespace elastix
 
#endif // end #ifndef __elxTransformixMain_h