itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform > Class Template Reference

#include <itkGPUAdvancedSimilarity3DTransform.h>

Detailed Description

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>
class itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >

GPU version of AdvancedSimilarity3DTransform.

Author

Denis P. Shamonin and Marius Staring. Division of Image Processing, Department of Radiology, Leiden, The Netherlands

Note

This work was funded by the Netherlands Organisation for Scientific Research (NWO NRG-2010.02 and NWO 639.021.124).

Definition at line 38 of file itkGPUAdvancedSimilarity3DTransform.h.

Inheritance diagram for itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >:

Public Types
using	ConstPointer = SmartPointer< const Self >
using	CPUInverseMatrixType = typename GPUSuperclass::CPUInverseMatrixType
using	CPUMatrixType = typename GPUSuperclass::CPUMatrixType
using	CPUOutputVectorType = typename GPUSuperclass::CPUOutputVectorType
using	CPUSuperclass = TParentTransform
using	GPUSuperclass = GPUMatrixOffsetTransformBase< TScalarType, 3, 3 >
using	Pointer = SmartPointer< Self >
using	Self = GPUAdvancedSimilarity3DTransform
Public Types inherited from itk::AdvancedSimilarity3DTransform< TScalarType >
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	ScaleType = TScalarType
using	Self = AdvancedSimilarity3DTransform
using	Superclass = AdvancedVersorRigid3DTransform< TScalarType >
Public Types inherited from itk::AdvancedVersorRigid3DTransform< TScalarType >
using	AngleType = typename VersorType::ValueType
using	AxisType = typename VersorType::VectorType
using	ConstPointer = SmartPointer< const Self >
using	Pointer = SmartPointer< Self >
using	Self = AdvancedVersorRigid3DTransform
using	Superclass = AdvancedVersorTransform< TScalarType >
using	VersorType = Versor< TScalarType >
Public Types inherited from itk::AdvancedVersorTransform< TScalarType >
using	AngleType = typename VersorType::ValueType
using	AxisType = typename VersorType::VectorType
using	CenterType = InputPointType
using	ConstPointer = SmartPointer< const Self >
using	InverseMatrixType = Matrix< TScalarType, Self::InputSpaceDimension, Self::OutputSpaceDimension >
using	MatrixType = Matrix< TScalarType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	OffsetType = OutputVectorType
using	Pointer = SmartPointer< Self >
using	Self = AdvancedVersorTransform
using	Superclass = AdvancedRigid3DTransform< TScalarType >
using	VersorType = Versor< TScalarType >
using	VnlQuaternionType = vnl_quaternion< TScalarType >
Public Types inherited from itk::AdvancedRigid3DTransform< TScalarType >
using	CenterType = InputPointType
using	ConstPointer = SmartPointer< const Self >
using	InverseMatrixType = Matrix< TScalarType, Self::InputSpaceDimension, Self::OutputSpaceDimension >
using	MatrixType = Matrix< TScalarType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	OffsetType = OutputVectorType
using	Pointer = SmartPointer< Self >
using	Self = AdvancedRigid3DTransform
using	Superclass = AdvancedMatrixOffsetTransformBase< TScalarType, 3, 3 >
using	TranslationType = OutputVectorType
Public Types inherited from itk::AdvancedMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
using	CenterType = InputPointType
using	ConstPointer = SmartPointer< const Self >
using	InverseMatrixType = Matrix< TScalarType, Self::InputSpaceDimension, Self::OutputSpaceDimension >
using	MatrixType = Matrix< TScalarType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	OffsetType = OutputVectorType
using	Pointer = SmartPointer< Self >
using	Self = AdvancedMatrixOffsetTransformBase
using	Superclass = AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
using	TranslationType = OutputVectorType
Public Types inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
using	ConstPointer = SmartPointer< const Self >
using	InternalMatrixType = typename SpatialJacobianType::InternalMatrixType
using	InverseTransformBaseType = typename Superclass::InverseTransformBaseType
using	JacobianOfSpatialHessianType = std::vector< SpatialHessianType >
using	JacobianOfSpatialJacobianType = std::vector< SpatialJacobianType >
using	MovingImageGradientType = OutputCovariantVectorType
using	MovingImageGradientValueType = typename MovingImageGradientType::ValueType
using	NonZeroJacobianIndicesType = std::vector< unsigned long >
using	Pointer = SmartPointer< Self >
using	Self = AdvancedTransform
using	SpatialHessianType = FixedArray< Matrix< ScalarType, InputSpaceDimension, InputSpaceDimension >, OutputSpaceDimension >
using	SpatialJacobianType = Matrix< ScalarType, OutputSpaceDimension, InputSpaceDimension >
using	Superclass = Transform< TScalarType, NInputDimensions, NOutputDimensions >
using	TransformType = Transform< TScalarType, NInputDimensions, NOutputDimensions >
using	TransformTypeConstPointer = typename TransformType::ConstPointer
using	TransformTypePointer = typename TransformType::Pointer
Public Types inherited from itk::GPUMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
using	CPUInverseMatrixType = Matrix< TScalarType, Self::InputSpaceDimension, Self::OutputSpaceDimension >
using	CPUMatrixType = Matrix< TScalarType, Self::OutputSpaceDimension, Self::InputSpaceDimension >
using	CPUOutputVectorType = Vector< TScalarType, Self::OutputSpaceDimension >
using	GPUSuperclass = GPUTransformBase
using	ScalarType = TScalarType
using	Self = GPUMatrixOffsetTransformBase
Public Types inherited from itk::GPUTransformBase
using	Self = GPUTransformBase

Public Member Functions
virtual const char *	GetClassName () const
const CPUMatrixType &	GetCPUMatrix () const override
const CPUOutputVectorType &	GetCPUOffset () const override
Public Member Functions inherited from itk::AdvancedSimilarity3DTransform< TScalarType >
void	GetJacobian (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
const ParametersType &	GetParameters () const override
virtual const ScaleType &	GetScale ()
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedSimilarity3DTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (ParametersDimension, unsigned int, 7)
	itkStaticConstMacro (SpaceDimension, unsigned int, 3)
void	SetMatrix (const MatrixType &matrix) override
void	SetParameters (const ParametersType &parameters) override
void	SetScale (ScaleType scale)
Public Member Functions inherited from itk::AdvancedVersorRigid3DTransform< TScalarType >
void	GetJacobian (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
const ParametersType &	GetParameters () const override
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedVersorRigid3DTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (ParametersDimension, unsigned int, 6)
	itkStaticConstMacro (SpaceDimension, unsigned int, 3)
void	SetParameters (const ParametersType &parameters) override
Public Member Functions inherited from itk::AdvancedVersorTransform< TScalarType >
void	GetJacobian (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const override
const ParametersType &	GetParameters () const override
virtual const VersorType &	GetVersor ()
	itkStaticConstMacro (InputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (ParametersDimension, unsigned int, 3)
	itkStaticConstMacro (SpaceDimension, unsigned int, 3)
void	SetIdentity () override
void	SetParameters (const ParametersType &parameters) override
void	SetRotation (const AxisType &axis, AngleType angle)
void	SetRotation (const VersorType &versor)
Public Member Functions inherited from itk::AdvancedRigid3DTransform< TScalarType >
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedRigid3DTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, 3)
	itkStaticConstMacro (ParametersDimension, unsigned int, 12)
	itkStaticConstMacro (SpaceDimension, unsigned int, 3)
bool	MatrixIsOrthogonal (const MatrixType &matrix, double tol=1e-10)
void	SetParameters (const ParametersType &parameters) override
Public Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
const InputPointType &	GetCenter () const
const FixedParametersType &	GetFixedParameters () const override
void	GetJacobianOfSpatialHessian (const InputPointType &, JacobianOfSpatialHessianType &, NonZeroJacobianIndicesType &) const override
void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &, SpatialJacobianType &, JacobianOfSpatialJacobianType &, NonZeroJacobianIndicesType &) const override
const MatrixType &	GetMatrix () const
const ParametersType &	GetParameters () const override
void	GetSpatialHessian (const InputPointType &, SpatialHessianType &) const override
void	GetSpatialJacobian (const InputPointType &, SpatialJacobianType &) const override
TransformCategoryEnum	GetTransformCategory () const override
const OutputVectorType &	GetTranslation () const
bool	IsLinear () const override
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
	itkStaticConstMacro (ParametersDimension, unsigned int, NOutputDimensions *(NInputDimensions+1))
void	SetCenter (const InputPointType &center)
void	SetFixedParameters (const FixedParametersType &) override
void	SetParameters (const ParametersType &parameters) override
void	SetTranslation (const OutputVectorType &translation)
OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &vector) const override
OutputPointType	TransformPoint (const InputPointType &point) const override
OutputVectorType	TransformVector (const InputVectorType &vector) const override
OutputVnlVectorType	TransformVector (const InputVnlVectorType &vector) const override
Public Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override
virtual void	EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
virtual bool	GetHasNonZeroJacobianOfSpatialHessian () const
virtual bool	GetHasNonZeroSpatialHessian () const
virtual NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
Public Member Functions inherited from itk::GPUMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
bool	IsMatrixOffsetTransform () const override
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
	itkStaticConstMacro (ParametersDimension, unsigned int, NOutputDimensions *(NInputDimensions+1))
Public Member Functions inherited from itk::GPUTransformBase
virtual const char *	GetNameOfClass () const
virtual GPUDataManager::Pointer	GetParametersDataManager (const std::vcl_size_t index) const
virtual bool	IsBSplineTransform () const
virtual bool	IsIdentityTransform () const
virtual bool	IsTranslationTransform () const

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedSimilarity3DTransform< TScalarType >
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedVersorRigid3DTransform< TScalarType >
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedVersorTransform< TScalarType >
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedRigid3DTransform< TScalarType >
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
static Pointer	New ()

Protected Member Functions
	GPUAdvancedSimilarity3DTransform ()=default
	~GPUAdvancedSimilarity3DTransform () override=default
Protected Member Functions inherited from itk::AdvancedSimilarity3DTransform< TScalarType >
	AdvancedSimilarity3DTransform ()
	AdvancedSimilarity3DTransform (const MatrixType &matrix, const OutputVectorType &offset)
	AdvancedSimilarity3DTransform (unsigned int outputSpaceDim, unsigned int paramDim)
void	ComputeMatrix () override
void	ComputeMatrixParameters () override
virtual void	PrecomputeJacobianOfSpatialJacobian ()
void	PrintSelf (std::ostream &os, Indent indent) const override
	~AdvancedSimilarity3DTransform () override=default
Protected Member Functions inherited from itk::AdvancedVersorRigid3DTransform< TScalarType >
	AdvancedVersorRigid3DTransform ()
	AdvancedVersorRigid3DTransform (const MatrixType &matrix, const OutputVectorType &offset)
	AdvancedVersorRigid3DTransform (unsigned int paramDim)
void	PrintSelf (std::ostream &os, Indent indent) const override
	~AdvancedVersorRigid3DTransform () override=default
Protected Member Functions inherited from itk::AdvancedVersorTransform< TScalarType >
	AdvancedVersorTransform ()
	AdvancedVersorTransform (const MatrixType &matrix, const OutputVectorType &offset)
	AdvancedVersorTransform (unsigned int paramDims)
void	ComputeMatrix () override
void	ComputeMatrixParameters () override
void	PrintSelf (std::ostream &os, Indent indent) const override
void	SetVarVersor (const VersorType &newVersor)
	~AdvancedVersorTransform () override=default
Protected Member Functions inherited from itk::AdvancedRigid3DTransform< TScalarType >
	AdvancedRigid3DTransform ()
	AdvancedRigid3DTransform (unsigned int paramDim)
void	PrintSelf (std::ostream &s, Indent indent) const override
	~AdvancedRigid3DTransform () override=default
Protected Member Functions inherited from itk::AdvancedMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
	AdvancedMatrixOffsetTransformBase (const unsigned int paramDims=ParametersDimension)
virtual void	ComputeOffset ()
void	ComputeTranslation ()
const OutputVectorType &	GetOffset () const
void	PrintSelf (std::ostream &s, Indent indent) const override
void	SetVarMatrix (const MatrixType &matrix)
void	SetVarTranslation (const OutputVectorType &translation)
	~AdvancedMatrixOffsetTransformBase () override=default
Protected Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
	AdvancedTransform ()=default
	~AdvancedTransform () override=default
Protected Member Functions inherited from itk::GPUMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
GPUDataManager::Pointer	GetParametersDataManager () const override
bool	GetSourceCode (std::string &source) const override
	GPUMatrixOffsetTransformBase ()
	~GPUMatrixOffsetTransformBase () override=default
Protected Member Functions inherited from itk::GPUTransformBase
	GPUTransformBase ()
virtual	~GPUTransformBase ()=default

Private Member Functions
	GPUAdvancedSimilarity3DTransform (const Self &other)=delete
const Self &	operator= (const Self &)=delete

Additional Inherited Members
Protected Attributes inherited from itk::AdvancedMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >
JacobianOfSpatialHessianType	m_JacobianOfSpatialHessian {}
JacobianOfSpatialJacobianType	m_JacobianOfSpatialJacobian {}
NonZeroJacobianIndicesType	m_NonZeroJacobianIndices {}
SpatialHessianType	m_SpatialHessian {}
Protected Attributes inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
bool	m_HasNonZeroJacobianOfSpatialHessian { true }
bool	m_HasNonZeroSpatialHessian { true }
Protected Attributes inherited from itk::GPUTransformBase
GPUDataManager::Pointer	m_ParametersDataManager {}

Member Typedef Documentation

ConstPointer

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::ConstPointer = SmartPointer<const Self>

Definition at line 48 of file itkGPUAdvancedSimilarity3DTransform.h.

CPUInverseMatrixType

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::CPUInverseMatrixType = typename GPUSuperclass::CPUInverseMatrixType

Definition at line 58 of file itkGPUAdvancedSimilarity3DTransform.h.

CPUMatrixType

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::CPUMatrixType = typename GPUSuperclass::CPUMatrixType

Typedefs from GPUSuperclass.

Definition at line 57 of file itkGPUAdvancedSimilarity3DTransform.h.

CPUOutputVectorType

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::CPUOutputVectorType = typename GPUSuperclass::CPUOutputVectorType

Definition at line 59 of file itkGPUAdvancedSimilarity3DTransform.h.

CPUSuperclass

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::CPUSuperclass = TParentTransform

Definition at line 45 of file itkGPUAdvancedSimilarity3DTransform.h.

GPUSuperclass

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GPUSuperclass = GPUMatrixOffsetTransformBase<TScalarType, 3, 3>

Definition at line 46 of file itkGPUAdvancedSimilarity3DTransform.h.

Pointer

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::Pointer = SmartPointer<Self>

Definition at line 47 of file itkGPUAdvancedSimilarity3DTransform.h.

Self

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

using itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::Self = GPUAdvancedSimilarity3DTransform

Standard class typedefs.

Definition at line 44 of file itkGPUAdvancedSimilarity3DTransform.h.

Constructor & Destructor Documentation

GPUAdvancedSimilarity3DTransform() [1/2]

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GPUAdvancedSimilarity3DTransform ( )

protecteddefault

~GPUAdvancedSimilarity3DTransform()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::~GPUAdvancedSimilarity3DTransform ( )

overrideprotecteddefault

GPUAdvancedSimilarity3DTransform() [2/2]

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GPUAdvancedSimilarity3DTransform ( const Self &  other )

privatedelete

Member Function Documentation

GetClassName()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

virtual const char * itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedSimilarity3DTransform< TScalarType >.

GetCPUMatrix()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

const CPUMatrixType & itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GetCPUMatrix ( ) const

inlineoverridevirtual

Get CPU matrix of an MatrixOffsetTransformBase.

Implements itk::GPUMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >.

Definition at line 63 of file itkGPUAdvancedSimilarity3DTransform.h.

GetCPUOffset()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

const CPUOutputVectorType & itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::GetCPUOffset ( ) const

inlineoverridevirtual

Get CPU offset of an MatrixOffsetTransformBase.

Implements itk::GPUMatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >.

Definition at line 70 of file itkGPUAdvancedSimilarity3DTransform.h.

New()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

static Pointer itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::New ( )

static

Method for creation through the object factory.

operator=()

template<typename TScalarType = float, typename TParentTransform = AdvancedSimilarity3DTransform<TScalarType>>

const Self & itk::GPUAdvancedSimilarity3DTransform< TScalarType, TParentTransform >::operator= ( const Self &  )

privatedelete