elastix::TranslationStackTransform< TElastix > Class Template Reference

#include <elxTranslationStackTransform.h>

Detailed Description

template<class TElastix>
class elastix::TranslationStackTransform< TElastix >

Definition at line 57 of file elxTranslationStackTransform.h.

Inheritance diagram for elastix::TranslationStackTransform< TElastix >:

Public Types
using	CombinationTransformType = typename Superclass2::CombinationTransformType
using	ConstPointer = itk::SmartPointer< const Self >
using	CoordRepType = ElastixBase::CoordRepType
using	FixedImageType = typename TElastix::FixedImageType
using	ITKBaseType = typename Superclass2::ITKBaseType
using	MovingImageType = typename TElastix::MovingImageType
using	ParameterMapType = typename TElastix::ParameterMapType
using	Pointer = itk::SmartPointer< Self >
using	ReducedDimensionTranslationTransformPointer = typename ReducedDimensionTranslationTransformType::Pointer
using	ReducedDimensionTranslationTransformType = itk::AdvancedTranslationTransform< typename elx::TransformBase< TElastix >::CoordRepType, Self::ReducedSpaceDimension >
using	Self = TranslationStackTransform
using	SizeType = typename FixedImageType::SizeType
using	Superclass1 = itk::AdvancedCombinationTransform< typename elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >
using	Superclass2 = elx::TransformBase< TElastix >
using	TranslationTransformPointer = typename TranslationTransformType::Pointer
using	TranslationTransformType = itk::AdvancedTranslationTransform< typename elx::TransformBase< TElastix >::CoordRepType, Self::SpaceDimension >
Public Types inherited from itk::AdvancedCombinationTransform< elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >
using	ConstPointer = SmartPointer< const Self >
using	CurrentTransformConstPointer = typename CurrentTransformType::ConstPointer
using	CurrentTransformInverseTransformBasePointer = typename CurrentTransformType::InverseTransformBasePointer
using	CurrentTransformInverseTransformBaseType = typename CurrentTransformType::InverseTransformBaseType
using	CurrentTransformPointer = typename CurrentTransformType::Pointer
using	CurrentTransformType = Superclass
using	InitialTransformConstPointer = typename InitialTransformType::ConstPointer
using	InitialTransformInverseTransformBasePointer = typename InitialTransformType::InverseTransformBasePointer
using	InitialTransformInverseTransformBaseType = typename InitialTransformType::InverseTransformBaseType
using	InitialTransformPointer = typename InitialTransformType::Pointer
using	InitialTransformType = Superclass
using	InverseTransformBaseType = typename Superclass::InverseTransformBaseType
using	Pointer = SmartPointer< Self >
using	Self = AdvancedCombinationTransform
using	Superclass = AdvancedTransform< elx::TransformBase< TElastix >::CoordRepType, NDimensions, NDimensions >
using	TransformType = typename Superclass::TransformType
using	TransformTypeConstPointer = typename TransformType::ConstPointer
using	TransformTypePointer = typename TransformType::Pointer
Public Types inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
using	ConstPointer = SmartPointer< const Self >
using	InternalMatrixType = typename SpatialJacobianType::InternalMatrixType
using	InverseTransformBaseType = typename Superclass::InverseTransformBaseType
using	JacobianOfSpatialHessianType = std::vector< SpatialHessianType >
using	JacobianOfSpatialJacobianType = std::vector< SpatialJacobianType >
using	MovingImageGradientType = OutputCovariantVectorType
using	MovingImageGradientValueType = typename MovingImageGradientType::ValueType
using	NonZeroJacobianIndicesType = std::vector< unsigned long >
using	Pointer = SmartPointer< Self >
using	Self = AdvancedTransform
using	SpatialHessianType = FixedArray< Matrix< ScalarType, InputSpaceDimension, InputSpaceDimension >, OutputSpaceDimension >
using	SpatialJacobianType = Matrix< ScalarType, OutputSpaceDimension, InputSpaceDimension >
using	Superclass = Transform< TScalarType, NInputDimensions, NOutputDimensions >
using	TransformType = Transform< TScalarType, NInputDimensions, NOutputDimensions >
using	TransformTypeConstPointer = typename TransformType::ConstPointer
using	TransformTypePointer = typename TransformType::Pointer
Public Types inherited from elastix::TransformBase< TElastix >
using	CombinationTransformType = itk::AdvancedCombinationTransform< CoordRepType, Self::FixedImageDimension >
using	CommandLineArgumentMapType = Configuration ::CommandLineArgumentMapType
using	CommandLineEntryType = Configuration ::CommandLineEntryType
using	ComponentDescriptionType = ComponentDatabase::ComponentDescriptionType
using	CoordRepType = ElastixBase::CoordRepType
using	DeformationFieldImageType = itk::Image< VectorPixelType, FixedImageDimension >
using	FixedImageType = typename TElastix::FixedImageType
using	InitialTransformType = typename CombinationTransformType::InitialTransformType
using	InputPointType = typename ITKBaseType::InputPointType
using	ITKBaseType = CombinationTransformType
using	ITKRegistrationType = typename RegistrationType::ITKBaseType
using	MovingImageType = typename TElastix::MovingImageType
using	OptimizerType = typename ITKRegistrationType::OptimizerType
using	OutputPointType = typename ITKBaseType::OutputPointType
using	ParameterMapType = typename TElastix::ParameterMapType
using	ParametersType = itk::OptimizerParameters< ValueType >
using	PtrToCreator = ComponentDatabase::PtrToCreator
using	RegistrationType = typename ElastixType::RegistrationBaseType
using	ScalesType = itk::Optimizer::ScalesType
using	Self = TransformBase
using	SpatialJacobianDeterminantImageType = itk::Image< float, FixedImageDimension >
using	SpatialJacobianMatrixImageType = itk::Image< itk::Matrix< float, MovingImageDimension, FixedImageDimension >, FixedImageDimension >
using	Superclass = BaseComponentSE< TElastix >
using	ValueType = double
using	VectorPixelType = itk::Vector< float, FixedImageDimension >
Public Types inherited from elastix::BaseComponentSE< TElastix >
using	ElastixType = TElastix
using	RegistrationType = typename ElastixType::RegistrationBaseType
using	Self = BaseComponentSE
using	Superclass = BaseComponent

Public Member Functions
int	BeforeAll () override
void	BeforeRegistration () override
	elxClassNameMacro ("TranslationStackTransform")
virtual const char *	GetClassName () const
	ITK_DISALLOW_COPY_AND_MOVE (TranslationStackTransform)
	itkStaticConstMacro (ReducedSpaceDimension, unsigned int, Superclass2::FixedImageDimension - 1)
	itkStaticConstMacro (SpaceDimension, unsigned int, Superclass2::FixedImageDimension)
void	ReadFromFile () override
Public Member Functions inherited from itk::AdvancedCombinationTransform< elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >
void	EvaluateJacobianWithImageGradientProduct (const InputPointType &inputPoint, const MovingImageGradientType &movingImageGradient, DerivativeType &imageJacobian, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
const FixedParametersType &	GetFixedParameters () const override
bool	GetHasNonZeroSpatialHessian () const override
bool	GetInverse (Self *inverse) const
void	GetJacobian (const InputPointType &inputPoint, JacobianType &j, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
void	GetJacobianOfSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const override
const TransformTypePointer	GetNthTransform (SizeValueType n) const
NumberOfParametersType	GetNumberOfNonZeroJacobianIndices () const override
NumberOfParametersType	GetNumberOfParameters () const override
SizeValueType	GetNumberOfTransforms () const
const ParametersType &	GetParameters () const override
void	GetSpatialHessian (const InputPointType &inputPoint, SpatialHessianType &sh) const override
void	GetSpatialJacobian (const InputPointType &inputPoint, SpatialJacobianType &sj) const override
TransformCategoryEnum	GetTransformCategory () const override
virtual bool	GetUseAddition () const
virtual bool	GetUseComposition () const
bool	HasNonZeroJacobianOfSpatialHessian () const
bool	IsLinear () const override
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedCombinationTransform)
	itkGetModifiableObjectMacro (CurrentTransform, CurrentTransformType)
	itkGetModifiableObjectMacro (InitialTransform, InitialTransformType)
	itkStaticConstMacro (SpaceDimension, unsigned int, NDimensions)
void	SetCurrentTransform (CurrentTransformType *_arg)
void	SetFixedParameters (const FixedParametersType &fixedParam) override
void	SetInitialTransform (InitialTransformType *_arg)
void	SetParameters (const ParametersType &param) override
void	SetParametersByValue (const ParametersType &param) override
void	SetUseAddition (bool _arg)
void	SetUseComposition (bool _arg)
OutputCovariantVectorType	TransformCovariantVector (const InputCovariantVectorType &) const override
OutputPointType	TransformPoint (const InputPointType &point) const override
OutputVectorType	TransformVector (const InputVectorType &) const override
OutputVnlVectorType	TransformVector (const InputVnlVectorType &) const override
Public Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
void	ComputeJacobianWithRespectToParameters (const InputPointType &, JacobianType &) const override
virtual bool	GetHasNonZeroJacobianOfSpatialHessian () const
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedTransform)
	itkStaticConstMacro (InputSpaceDimension, unsigned int, NInputDimensions)
	itkStaticConstMacro (OutputSpaceDimension, unsigned int, NOutputDimensions)
Public Member Functions inherited from elastix::TransformBase< TElastix >
int	BeforeAllTransformix ()
void	ComputeAndWriteSpatialJacobianDeterminantImage () const
void	ComputeAndWriteSpatialJacobianMatrixImage () const
SpatialJacobianDeterminantImageType::Pointer	ComputeSpatialJacobianDeterminantImage () const
SpatialJacobianMatrixImageType::Pointer	ComputeSpatialJacobianMatrixImage () const
void	CreateTransformParameterMap (const ParametersType &param, ParameterMapType &parameterMap, const bool includeDerivedTransformParameters=true) const
ITKBaseType *	GetAsITKBaseType ()
const ITKBaseType *	GetAsITKBaseType () const
	ITK_DISALLOW_COPY_AND_MOVE (TransformBase)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
void	ReadInitialTransformFromFile (const std::string &transformParameterFileName)
void	SetFinalParameters ()
void	SetInitialTransform (InitialTransformType *_arg)
void	SetReadWriteTransformParameters (const bool _arg)
void	SetTransformParameterFileName (const std::string &filename)
template<typename TMesh >
TMesh::Pointer	TransformMesh (const TMesh &mesh) const
void	TransformPoints () const
void	WriteToFile (std::ostream &transformationParameterInfo, const ParametersType &param) const
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
void	AddTargetCellToIterationInfo (const char *const name)
const Configuration *	GetConfiguration () const
ElastixType *	GetElastix () const
auto &	GetIterationInfoAt (const char *const name)
RegistrationType *	GetRegistration () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponentSE)
void	RemoveTargetCellFromIterationInfo (const char *const name)
void	SetConfiguration (const Configuration *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration ()
virtual void	AfterEachIterationBase ()
virtual void	AfterEachResolution ()
virtual void	AfterEachResolutionBase ()
virtual void	AfterRegistration ()
virtual void	BeforeEachResolution ()
virtual void	BeforeEachResolutionBase ()
virtual const char *	elxGetClassName () const
const char *	GetComponentLabel () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::AdvancedCombinationTransform< elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
template<typename TBaseComponent >
static auto	AsITKBaseType (TBaseComponent *const baseComponent) -> decltype(baseComponent->GetAsITKBaseType())
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Member Functions
	TranslationStackTransform ()
	~TranslationStackTransform () override=default
Protected Member Functions inherited from itk::AdvancedCombinationTransform< elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >
	AdvancedCombinationTransform ()
void	EvaluateJacobianWithImageGradientProductNoCurrentTransform (const InputPointType &, const MovingImageGradientType &, DerivativeType &, NonZeroJacobianIndicesType &) const
void	EvaluateJacobianWithImageGradientProductNoInitialTransform (const InputPointType &, const MovingImageGradientType &, DerivativeType &, NonZeroJacobianIndicesType &) const
void	EvaluateJacobianWithImageGradientProductUseAddition (const InputPointType &, const MovingImageGradientType &, DerivativeType &, NonZeroJacobianIndicesType &) const
void	EvaluateJacobianWithImageGradientProductUseComposition (const InputPointType &, const MovingImageGradientType &, DerivativeType &, NonZeroJacobianIndicesType &) const
void	GetJacobianNoCurrentTransform (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const
void	GetJacobianNoInitialTransform (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const
void	GetJacobianOfSpatialHessianNoCurrentTransform (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianNoCurrentTransform (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianNoInitialTransform (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianNoInitialTransform (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianUseAddition (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianUseAddition (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianUseComposition (const InputPointType &inputPoint, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialHessianUseComposition (const InputPointType &inputPoint, SpatialHessianType &sh, JacobianOfSpatialHessianType &jsh, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianNoCurrentTransform (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianNoCurrentTransform (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianNoInitialTransform (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianNoInitialTransform (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianUseAddition (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianUseAddition (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianUseComposition (const InputPointType &inputPoint, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianOfSpatialJacobianUseComposition (const InputPointType &inputPoint, SpatialJacobianType &sj, JacobianOfSpatialJacobianType &jsj, NonZeroJacobianIndicesType &nonZeroJacobianIndices) const
void	GetJacobianUseAddition (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const
void	GetJacobianUseComposition (const InputPointType &, JacobianType &, NonZeroJacobianIndicesType &) const
void	GetSpatialHessianNoCurrentTransform (const InputPointType &inputPoint, SpatialHessianType &sh) const
void	GetSpatialHessianNoInitialTransform (const InputPointType &inputPoint, SpatialHessianType &sh) const
void	GetSpatialHessianUseAddition (const InputPointType &inputPoint, SpatialHessianType &sh) const
void	GetSpatialHessianUseComposition (const InputPointType &inputPoint, SpatialHessianType &sh) const
void	GetSpatialJacobianNoCurrentTransform (const InputPointType &inputPoint, SpatialJacobianType &sj) const
void	GetSpatialJacobianNoInitialTransform (const InputPointType &inputPoint, SpatialJacobianType &sj) const
void	GetSpatialJacobianUseAddition (const InputPointType &inputPoint, SpatialJacobianType &sj) const
void	GetSpatialJacobianUseComposition (const InputPointType &inputPoint, SpatialJacobianType &sj) const
OutputPointType	TransformPointNoCurrentTransform (const InputPointType &point) const
OutputPointType	TransformPointNoInitialTransform (const InputPointType &point) const
OutputPointType	TransformPointUseAddition (const InputPointType &point) const
OutputPointType	TransformPointUseComposition (const InputPointType &point) const
void	UpdateCombinationMethod ()
	~AdvancedCombinationTransform () override=default
Protected Member Functions inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
	AdvancedTransform ()=default
	~AdvancedTransform () override=default
Protected Member Functions inherited from elastix::TransformBase< TElastix >
void	AutomaticScalesEstimation (ScalesType &scales) const
void	AutomaticScalesEstimationStackTransform (const unsigned int numSubTransforms, ScalesType &scales) const
bool	HasITKTransformParameters () const
	TransformBase ()=default
	~TransformBase () override=default
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Types
using	StackTransformType = itk::TranslationStackTransform< SpaceDimension >

Private Member Functions
ParameterMapType	CreateDerivedTransformParameterMap () const override
void	InitializeTransform ()
unsigned int	InitializeTranslationTransform ()

Private Attributes
	elxOverrideGetSelfMacro
ReducedDimensionTranslationTransformPointer	m_DummySubTransform
unsigned int	m_NumberOfSubTransforms
double	m_StackOrigin
double	m_StackSpacing
const StackTransformType::Pointer	m_StackTransform { StackTransformType::New() }

Additional Inherited Members
Protected Attributes inherited from itk::AdvancedTransform< TScalarType, NInputDimensions, NOutputDimensions >
bool	m_HasNonZeroJacobianOfSpatialHessian { true }
bool	m_HasNonZeroSpatialHessian { true }
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
Configuration::ConstPointer	m_Configuration {}
itk::WeakPointer< TElastix >	m_Elastix {}
RegistrationType *	m_Registration {}

Member Typedef Documentation

CombinationTransformType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::CombinationTransformType = typename Superclass2::CombinationTransformType

Definition at line 113 of file elxTranslationStackTransform.h.

ConstPointer

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::ConstPointer = itk::SmartPointer<const Self>

Definition at line 71 of file elxTranslationStackTransform.h.

CoordRepType

template<class TElastix >

using elastix::TransformBase< TElastix >::CoordRepType = ElastixBase::CoordRepType

Elastix typedef's.

Definition at line 156 of file elxTransformBase.h.

FixedImageType

template<class TElastix >

using elastix::TransformBase< TElastix >::FixedImageType = typename TElastix::FixedImageType

Definition at line 157 of file elxTransformBase.h.

ITKBaseType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::ITKBaseType = typename Superclass2::ITKBaseType

Definition at line 112 of file elxTranslationStackTransform.h.

MovingImageType

template<class TElastix >

using elastix::TransformBase< TElastix >::MovingImageType = typename TElastix::MovingImageType

Definition at line 158 of file elxTransformBase.h.

ParameterMapType

template<class TElastix >

using elastix::TransformBase< TElastix >::ParameterMapType = typename TElastix::ParameterMapType

Typedef that is used in the elastix dll version.

Definition at line 199 of file elxTransformBase.h.

Pointer

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::Pointer = itk::SmartPointer<Self>

Definition at line 70 of file elxTranslationStackTransform.h.

ReducedDimensionTranslationTransformPointer

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::ReducedDimensionTranslationTransformPointer = typename ReducedDimensionTranslationTransformType::Pointer

Definition at line 99 of file elxTranslationStackTransform.h.

ReducedDimensionTranslationTransformType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::ReducedDimensionTranslationTransformType = itk::AdvancedTranslationTransform<typename elx::TransformBase<TElastix>::CoordRepType, Self::ReducedSpaceDimension>

The ITK-class for the sub transforms, which have a reduced dimension.

Definition at line 97 of file elxTranslationStackTransform.h.

Self

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::Self = TranslationStackTransform

Standard ITK-stuff.

Definition at line 66 of file elxTranslationStackTransform.h.

SizeType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::SizeType = typename FixedImageType::SizeType

Typedef SizeType.

Definition at line 116 of file elxTranslationStackTransform.h.

StackTransformType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::StackTransformType = itk::TranslationStackTransform<SpaceDimension>

private

The deleted copy constructor and assignment operator. Typedef for stack transform.

Definition at line 152 of file elxTranslationStackTransform.h.

Superclass1

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::Superclass1 = itk::AdvancedCombinationTransform<typename elx::TransformBase<TElastix>::CoordRepType, elx::TransformBase<TElastix>::FixedImageDimension>

Definition at line 67 of file elxTranslationStackTransform.h.

Superclass2

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::Superclass2 = elx::TransformBase<TElastix>

Definition at line 69 of file elxTranslationStackTransform.h.

TranslationTransformPointer

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::TranslationTransformPointer = typename TranslationTransformType::Pointer

Definition at line 94 of file elxTranslationStackTransform.h.

TranslationTransformType

template<class TElastix >

using elastix::TranslationStackTransform< TElastix >::TranslationTransformType = itk::AdvancedTranslationTransform<typename elx::TransformBase<TElastix>::CoordRepType, Self::SpaceDimension>

The ITK-class that provides most of the functionality, and that is set as the "CurrentTransform" in the CombinationTransform.

Definition at line 92 of file elxTranslationStackTransform.h.

Constructor & Destructor Documentation

TranslationStackTransform()

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::TranslationStackTransform ( )

inlineprotected

The constructor.

Definition at line 135 of file elxTranslationStackTransform.h.

~TranslationStackTransform()

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::~TranslationStackTransform ( )

overrideprotecteddefault

The destructor.

Member Function Documentation

BeforeAll()

template<class TElastix >

int elastix::TranslationStackTransform< TElastix >::BeforeAll ( )

overridevirtual

Execute stuff before the actual registration:

• Set the stack transform parameters.
• Set initial sub transforms.
• Create initial registration parameters.

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

void elastix::TranslationStackTransform< TElastix >::BeforeRegistration ( )

overridevirtual

Reimplemented from elastix::BaseComponent.

CreateDerivedTransformParameterMap()

template<class TElastix >

ParameterMapType elastix::TranslationStackTransform< TElastix >::CreateDerivedTransformParameterMap ( ) const

overrideprivatevirtual

Creates a map of the parameters specific for this (derived) transform type.

Implements elastix::TransformBase< TElastix >.

elxClassNameMacro()

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::elxClassNameMacro

(

"TranslationStackTransform< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific transform.
example: (Transform "TranslationStackTransform")

GetClassName()

template<class TElastix >

virtual const char * elastix::TranslationStackTransform< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::AdvancedCombinationTransform< elx::TransformBase< TElastix >::CoordRepType, elx::TransformBase< TElastix >::FixedImageDimension >.

InitializeTransform()

template<class TElastix >

void elastix::TranslationStackTransform< TElastix >::InitializeTransform ( )

private

InitializeTranslationTransform()

template<class TElastix >

unsigned int elastix::TranslationStackTransform< TElastix >::InitializeTranslationTransform ( )

private

ITK_DISALLOW_COPY_AND_MOVE()

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::ITK_DISALLOW_COPY_AND_MOVE

(

TranslationStackTransform< TElastix >

)

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::itkStaticConstMacro	(	ReducedSpaceDimension	,
		unsigned int	,
		Superclass2::FixedImageDimension -	1
	)

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::itkStaticConstMacro	(	SpaceDimension	,
		unsigned int	,
		Superclass2::FixedImageDimension
	)

(Reduced) dimension of the fixed image.

New()

template<class TElastix >

static Pointer elastix::TranslationStackTransform< TElastix >::New ( )

static

Method for creation through the object factory.

ReadFromFile()

template<class TElastix >

void elastix::TranslationStackTransform< TElastix >::ReadFromFile ( )

overridevirtual

Function to read transform-parameters from a file.

Reimplemented from elastix::TransformBase< TElastix >.

Field Documentation

elxOverrideGetSelfMacro

template<class TElastix >

elastix::TranslationStackTransform< TElastix >::elxOverrideGetSelfMacro

private

Definition at line 141 of file elxTranslationStackTransform.h.

m_DummySubTransform

template<class TElastix >

ReducedDimensionTranslationTransformPointer elastix::TranslationStackTransform< TElastix >::m_DummySubTransform

private

Dummy sub transform to be used to set sub transforms of stack transform.

Definition at line 158 of file elxTranslationStackTransform.h.

m_NumberOfSubTransforms

template<class TElastix >

unsigned int elastix::TranslationStackTransform< TElastix >::m_NumberOfSubTransforms

private

Stack variables.

Definition at line 161 of file elxTranslationStackTransform.h.

m_StackOrigin

template<class TElastix >

double elastix::TranslationStackTransform< TElastix >::m_StackOrigin

private

Definition at line 162 of file elxTranslationStackTransform.h.

m_StackSpacing

template<class TElastix >

double elastix::TranslationStackTransform< TElastix >::m_StackSpacing

private

Definition at line 162 of file elxTranslationStackTransform.h.

m_StackTransform

template<class TElastix >

const StackTransformType::Pointer elastix::TranslationStackTransform< TElastix >::m_StackTransform { StackTransformType::New() }

private

The Translation stack transform.

Definition at line 155 of file elxTranslationStackTransform.h.