elastix::MultiResolutionRegistrationWithFeatures< TElastix > Class Template Reference

#include <elxMultiResolutionRegistrationWithFeatures.h>

Detailed Description

template<class TElastix>
class elastix::MultiResolutionRegistrationWithFeatures< TElastix >

A registration framework based on the itk::MultiResolutionImageRegistrationMethodWithFeatures.

This MultiResolutionRegistrationWithFeatures gives a framework for registration with a multi-resolution approach, using ... Like this for example:
(Interpolator "BSplineInterpolator" "BSplineInterpolator")

The parameters used in this class are:

Parameters:

Registration: Select this registration framework as follows:
(Registration "MultiResolutionRegistrationWithFeatures")

NumberOfResolutions: the number of resolutions used.
example: (NumberOfResolutions 4)
The default is 3.

Metric<i>Weight: The weight for the i-th metric, in each resolution
example: (Metric0Weight 0.5 0.5 0.8)
example: (Metric1Weight 0.5 0.5 0.2)
The default is 1.0.

Definition at line 53 of file elxMultiResolutionRegistrationWithFeatures.h.

Inheritance diagram for elastix::MultiResolutionRegistrationWithFeatures< TElastix >:

Public Types
typedef Superclass2::ConfigurationPointer	ConfigurationPointer
typedef Superclass2::ConfigurationType	ConfigurationType
typedef itk::SmartPointer< const Self >	ConstPointer
typedef Superclass2::ElastixPointer	ElastixPointer
typedef Superclass2::ElastixType	ElastixType
typedef Superclass1::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass1::FixedImagePyramidPointer	FixedImagePyramidPointer
typedef Superclass1::FixedImagePyramidType	FixedImagePyramidType
typedef Superclass1::FixedImageRegionType	FixedImageRegionType
typedef Superclass1::FixedImageType	FixedImageType
typedef Superclass1::InterpolatorPointer	InterpolatorPointer
typedef Superclass1::InterpolatorType	InterpolatorType
typedef Superclass2::ITKBaseType	ITKBaseType
typedef Superclass1::MetricPointer	MetricPointer
typedef Superclass1::MetricType	MetricType
typedef Superclass1::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass1::MovingImagePyramidPointer	MovingImagePyramidPointer
typedef Superclass1::MovingImagePyramidType	MovingImagePyramidType
typedef Superclass1::MovingImageType	MovingImageType
typedef Superclass1::OptimizerPointer	OptimizerPointer
typedef Superclass1::OptimizerType	OptimizerType
typedef Superclass1::ParametersType	ParametersType
typedef itk::SmartPointer< Self >	Pointer
typedef Superclass2::RegistrationPointer	RegistrationPointer
typedef Superclass2::RegistrationType	RegistrationType
typedef MultiResolutionRegistrationWithFeatures	Self
typedef itk::MultiResolutionImageRegistrationMethodWithFeatures< typename RegistrationBase< TElastix >::FixedImageType, typename RegistrationBase< TElastix >::MovingImageType >	Superclass1
typedef RegistrationBase< TElastix >	Superclass2
typedef Superclass1::TransformPointer	TransformPointer
typedef Superclass1::TransformType	TransformType
typedef Superclass2::UseMaskErosionArrayType	UseMaskErosionArrayType
Public Types inherited from itk::MultiResolutionImageRegistrationMethodWithFeatures< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DataObjectPointer	DataObjectPointer
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef Superclass::FixedImagePyramidPointer	FixedImagePyramidPointer
typedef Superclass::FixedImagePyramidType	FixedImagePyramidType
typedef Superclass::FixedImageRegionPyramidType	FixedImageRegionPyramidType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef Superclass::FixedImageType	FixedImageType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef Superclass::MetricPointer	MetricPointer
typedef Superclass::MetricType	MetricType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImagePyramidPointer	MovingImagePyramidPointer
typedef Superclass::MovingImagePyramidType	MovingImagePyramidType
typedef Superclass::MovingImageType	MovingImageType
typedef OptimizerType::Pointer	OptimizerPointer
typedef Superclass::OptimizerType	OptimizerType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef MultiResolutionImageRegistrationMethodWithFeatures	Self
typedef MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >	Superclass
typedef Superclass::TransformOutputConstPointer	TransformOutputConstPointer
typedef Superclass::TransformOutputPointer	TransformOutputPointer
typedef Superclass::TransformOutputType	TransformOutputType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
typedef SmartPointer< const Self >	ConstPointer
typedef Superclass::DataObjectPointer	DataObjectPointer
typedef Superclass::FixedImageConstPointer	FixedImageConstPointer
typedef MultiInputMetricType::FixedImageInterpolatorType	FixedImageInterpolatorType
typedef MultiInputMetricType::FixedImageInterpolatorVectorType	FixedImageInterpolatorVectorType
typedef Superclass::FixedImagePyramidPointer	FixedImagePyramidPointer
typedef Superclass::FixedImagePyramidType	FixedImagePyramidType
typedef std::vector< FixedImagePyramidPointer >	FixedImagePyramidVectorType
typedef Superclass::FixedImageRegionPyramidType	FixedImageRegionPyramidType
typedef std::vector< FixedImageRegionPyramidType >	FixedImageRegionPyramidVectorType
typedef Superclass::FixedImageRegionType	FixedImageRegionType
typedef MultiInputMetricType::FixedImageRegionVectorType	FixedImageRegionVectorType
typedef Superclass::FixedImageType	FixedImageType
typedef MultiInputMetricType::FixedImageVectorType	FixedImageVectorType
typedef Superclass::InterpolatorPointer	InterpolatorPointer
typedef Superclass::InterpolatorType	InterpolatorType
typedef MultiInputMetricType::InterpolatorVectorType	InterpolatorVectorType
typedef Superclass::MetricPointer	MetricPointer
typedef Superclass::MetricType	MetricType
typedef Superclass::MovingImageConstPointer	MovingImageConstPointer
typedef Superclass::MovingImagePyramidPointer	MovingImagePyramidPointer
typedef Superclass::MovingImagePyramidType	MovingImagePyramidType
typedef std::vector< MovingImagePyramidPointer >	MovingImagePyramidVectorType
typedef Superclass::MovingImageType	MovingImageType
typedef MultiInputMetricType::MovingImageVectorType	MovingImageVectorType
typedef MultiInputMetricType::Pointer	MultiInputMetricPointer
typedef MultiInputImageToImageMetricBase< FixedImageType, MovingImageType >	MultiInputMetricType
typedef OptimizerType::Pointer	OptimizerPointer
typedef Superclass::OptimizerType	OptimizerType
typedef Superclass::ParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef MultiInputMultiResolutionImageRegistrationMethodBase	Self
typedef MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >	Superclass
typedef Superclass::TransformOutputConstPointer	TransformOutputConstPointer
typedef Superclass::TransformOutputPointer	TransformOutputPointer
typedef Superclass::TransformOutputType	TransformOutputType
typedef Superclass::TransformPointer	TransformPointer
typedef Superclass::TransformType	TransformType
Public Types inherited from itk::MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
typedef SmartPointer< const Self >	ConstPointer
typedef DataObject::Pointer	DataObjectPointer
typedef FixedImageType::ConstPointer	FixedImageConstPointer
typedef FixedImagePyramidType::Pointer	FixedImagePyramidPointer
typedef MultiResolutionPyramidImageFilter< FixedImageType, FixedImageType >	FixedImagePyramidType
typedef std::vector< FixedImageRegionType >	FixedImageRegionPyramidType
typedef FixedImageType::RegionType	FixedImageRegionType
typedef RegistrationBase< TElastix >::FixedImageType	FixedImageType
typedef InterpolatorType::Pointer	InterpolatorPointer
typedef MetricType::InterpolatorType	InterpolatorType
typedef MetricType::Pointer	MetricPointer
typedef AdvancedImageToImageMetric< FixedImageType, MovingImageType >	MetricType
typedef MovingImageType::ConstPointer	MovingImageConstPointer
typedef MovingImagePyramidType::Pointer	MovingImagePyramidPointer
typedef MultiResolutionPyramidImageFilter< MovingImageType, MovingImageType >	MovingImagePyramidType
typedef RegistrationBase< TElastix >::MovingImageType	MovingImageType
typedef SingleValuedNonLinearOptimizer	OptimizerType
typedef MetricType::TransformParametersType	ParametersType
typedef SmartPointer< Self >	Pointer
typedef MultiResolutionImageRegistrationMethod2	Self
typedef ProcessObject	Superclass
typedef TransformOutputType::ConstPointer	TransformOutputConstPointer
typedef TransformOutputType::Pointer	TransformOutputPointer
typedef DataObjectDecorator< TransformType >	TransformOutputType
typedef TransformType::Pointer	TransformPointer
typedef MetricType::AdvancedTransformType	TransformType
Public Types inherited from elastix::RegistrationBase< TElastix >
typedef Superclass::ConfigurationPointer	ConfigurationPointer
typedef Superclass::ConfigurationType	ConfigurationType
typedef Superclass::ElastixPointer	ElastixPointer
typedef Superclass::ElastixType	ElastixType
typedef ElastixType::FixedImageType	FixedImageType
typedef itk::MultiResolutionImageRegistrationMethod2< FixedImageType, MovingImageType >	ITKBaseType
typedef ElastixType::MovingImageType	MovingImageType
typedef Superclass::RegistrationPointer	RegistrationPointer
typedef Superclass::RegistrationType	RegistrationType
typedef RegistrationBase	Self
typedef BaseComponentSE< TElastix >	Superclass
typedef std::vector< bool >	UseMaskErosionArrayType
Public Types inherited from elastix::BaseComponentSE< TElastix >
typedef Configuration::Pointer	ConfigurationPointer
typedef Configuration	ConfigurationType
typedef itk::WeakPointer< ElastixType >	ElastixPointer
typedef TElastix	ElastixType
typedef RegistrationType *	RegistrationPointer
typedef ElastixType::RegistrationBaseType	RegistrationType
typedef BaseComponentSE	Self
typedef BaseComponent	Superclass

Public Member Functions
void	BeforeEachResolution (void) override
void	BeforeRegistration (void) override
	elxClassNameMacro ("MultiResolutionRegistrationWithFeatures")
virtual const char *	GetClassName () const
	itkStaticConstMacro (FixedImageDimension, unsigned int, Superclass2::FixedImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, Superclass2::MovingImageDimension)
virtual const char *	GetClassName () const
Public Member Functions inherited from itk::MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
	elxOverrideSimpleSetMacro (FixedImage, const FixedImageType *)
	elxOverrideSimpleSetMacro (FixedImagePyramid, FixedImagePyramidType *)
	elxOverrideSimpleSetMacro (FixedImageRegion, const FixedImageRegionType)
	elxOverrideSimpleSetMacro (Interpolator, InterpolatorType *)
	elxOverrideSimpleSetMacro (MovingImage, const MovingImageType *)
	elxOverrideSimpleSetMacro (MovingImagePyramid, MovingImagePyramidType *)
virtual const char *	GetClassName () const
virtual const FixedImageType *	GetFixedImage (unsigned int pos) const
const FixedImageType *	GetFixedImage (void) const override
virtual FixedImageInterpolatorType *	GetFixedImageInterpolator (unsigned int pos) const
virtual FixedImageInterpolatorType *	GetFixedImageInterpolator (void)
virtual FixedImagePyramidType *	GetFixedImagePyramid (unsigned int pos) const
FixedImagePyramidType *	GetFixedImagePyramid (void) override
virtual const FixedImageRegionType &	GetFixedImageRegion (unsigned int pos) const
const FixedImageRegionType &	GetFixedImageRegion (void) const override
virtual InterpolatorType *	GetInterpolator (unsigned int pos) const
InterpolatorType *	GetInterpolator (void) override
virtual const MovingImageType *	GetMovingImage (unsigned int pos) const
const MovingImageType *	GetMovingImage (void) const override
virtual MovingImagePyramidType *	GetMovingImagePyramid (unsigned int pos) const
MovingImagePyramidType *	GetMovingImagePyramid (void) override
ModifiedTimeType	GetMTime (void) const override
	itkGetModifiableObjectMacro (MultiInputMetric, MultiInputMetricType)
	itkGetNumberOfMacro (FixedImage)
	itkGetNumberOfMacro (FixedImageInterpolator)
	itkGetNumberOfMacro (FixedImagePyramid)
	itkGetNumberOfMacro (FixedImageRegion)
	itkGetNumberOfMacro (Interpolator)
	itkGetNumberOfMacro (MovingImage)
	itkGetNumberOfMacro (MovingImagePyramid)
	itkSetNumberOfMacro (FixedImage)
	itkSetNumberOfMacro (FixedImageInterpolator)
	itkSetNumberOfMacro (FixedImagePyramid)
	itkSetNumberOfMacro (FixedImageRegion)
	itkSetNumberOfMacro (Interpolator)
	itkSetNumberOfMacro (MovingImage)
	itkSetNumberOfMacro (MovingImagePyramid)
	itkSimpleSetMacro (FixedImageInterpolator, FixedImageInterpolatorType *)
virtual void	SetFixedImage (const FixedImageType *_arg, unsigned int pos)
virtual void	SetFixedImageInterpolator (FixedImageInterpolatorType *_arg, unsigned int pos)
virtual void	SetFixedImagePyramid (FixedImagePyramidType *_arg, unsigned int pos)
virtual void	SetFixedImageRegion (FixedImageRegionType _arg, unsigned int pos)
virtual void	SetInterpolator (InterpolatorType *_arg, unsigned int pos)
void	SetMetric (MetricType *_arg) override
virtual void	SetMovingImage (const MovingImageType *_arg, unsigned int pos)
virtual void	SetMovingImagePyramid (MovingImagePyramidType *_arg, unsigned int pos)
Public Member Functions inherited from itk::MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
virtual const char *	GetClassName () const
virtual unsigned long	GetCurrentLevel ()
virtual const FixedImageType *	GetFixedImage ()
virtual const FixedImageRegionType &	GetFixedImageRegion ()
virtual const ParametersType &	GetInitialTransformParameters ()
virtual const ParametersType &	GetInitialTransformParametersOfNextLevel ()
virtual const ParametersType &	GetLastTransformParameters ()
virtual const MovingImageType *	GetMovingImage ()
ModifiedTimeType	GetMTime (void) const override
virtual unsigned long	GetNumberOfLevels ()
const TransformOutputType *	GetOutput (void) const
	itkGetModifiableObjectMacro (FixedImagePyramid, FixedImagePyramidType)
	itkGetModifiableObjectMacro (Interpolator, InterpolatorType)
	itkGetModifiableObjectMacro (Metric, MetricType)
	itkGetModifiableObjectMacro (MovingImagePyramid, MovingImagePyramidType)
	itkGetModifiableObjectMacro (Optimizer, OptimizerType)
	itkGetModifiableObjectMacro (Transform, TransformType)
virtual DataObjectPointer	MakeOutput (unsigned int idx)
virtual void	SetFixedImage (const FixedImageType *_arg)
virtual void	SetFixedImagePyramid (FixedImagePyramidType *_arg)
virtual void	SetFixedImageRegion (FixedImageRegionType _arg)
virtual void	SetInitialTransformParameters (ParametersType _arg)
virtual void	SetInitialTransformParametersOfNextLevel (ParametersType _arg)
virtual void	SetInterpolator (InterpolatorType *_arg)
virtual void	SetMetric (MetricType *_arg)
virtual void	SetMovingImage (const MovingImageType *_arg)
virtual void	SetMovingImagePyramid (MovingImagePyramidType *_arg)
virtual void	SetNumberOfLevels (unsigned long _arg)
virtual void	SetOptimizer (OptimizerType *_arg)
virtual void	SetTransform (TransformType *_arg)
virtual void	StartRegistration (void)
virtual void	StopRegistration (void)
Public Member Functions inherited from elastix::RegistrationBase< TElastix >
virtual ITKBaseType *	GetAsITKBaseType (void)
virtual const ITKBaseType *	GetAsITKBaseType (void) const
virtual const char *	GetClassName () const
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual bool	ReadMaskParameters (UseMaskErosionArrayType &useMaskErosionArray, const unsigned int nrOfMasks, const std::string &whichMask, const unsigned int level) const
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
ConfigurationType *	GetConfiguration (void) const
ElastixType *	GetElastix (void) const
RegistrationPointer	GetRegistration (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponentSE)
void	SetConfiguration (ConfigurationType *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration (void)
virtual void	AfterEachIterationBase (void)
virtual void	AfterEachResolution (void)
virtual void	AfterEachResolutionBase (void)
virtual void	AfterRegistration (void)
virtual void	AfterRegistrationBase (void)
virtual int	BeforeAll (void)
virtual int	BeforeAllBase (void)
virtual void	BeforeEachResolution (void)
virtual void	BeforeEachResolutionBase (void)
virtual void	BeforeRegistration (void)
virtual void	BeforeRegistrationBase (void)
virtual const char *	elxGetClassName (void) const
const char *	GetComponentLabel (void) const
	ITK_DISALLOW_COPY_AND_ASSIGN (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::MultiResolutionImageRegistrationMethodWithFeatures< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
static Pointer	New ()
Static Public Member Functions inherited from itk::MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
static Pointer	New ()
Static Public Member Functions inherited from itk::MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
static std::string	ConvertSecondsToDHMS (const double totalSeconds, const unsigned int precision)
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Types
typedef Superclass2::FixedMaskImagePointer	FixedMaskImagePointer
typedef Superclass2::FixedMaskImageType	FixedMaskImageType
typedef Superclass2::FixedMaskSpatialObjectPointer	FixedMaskSpatialObjectPointer
typedef Superclass2::FixedMaskSpatialObjectType	FixedMaskSpatialObjectType
typedef Superclass2::MaskPixelType	MaskPixelType
typedef Superclass2::MovingMaskImagePointer	MovingMaskImagePointer
typedef Superclass2::MovingMaskImageType	MovingMaskImageType
typedef Superclass2::MovingMaskSpatialObjectPointer	MovingMaskSpatialObjectPointer
typedef Superclass2::MovingMaskSpatialObjectType	MovingMaskSpatialObjectType
Protected Types inherited from elastix::RegistrationBase< TElastix >
typedef ITKBaseType::FixedImagePyramidType	FixedImagePyramidType
typedef FixedMaskErodeFilterType::Pointer	FixedMaskErodeFilterPointer
typedef itk::ErodeMaskImageFilter< FixedMaskImageType >	FixedMaskErodeFilterType
typedef FixedMaskImageType::Pointer	FixedMaskImagePointer
typedef ElastixType::FixedMaskType	FixedMaskImageType
typedef FixedMaskSpatialObjectType::Pointer	FixedMaskSpatialObjectPointer
typedef itk::ImageMaskSpatialObject< itkGetStaticConstMacro(FixedImageDimension) >	FixedMaskSpatialObjectType
typedef ElastixType::MaskPixelType	MaskPixelType
typedef ITKBaseType::MovingImagePyramidType	MovingImagePyramidType
typedef MovingMaskErodeFilterType::Pointer	MovingMaskErodeFilterPointer
typedef itk::ErodeMaskImageFilter< MovingMaskImageType >	MovingMaskErodeFilterType
typedef MovingMaskImageType::Pointer	MovingMaskImagePointer
typedef ElastixType::MovingMaskType	MovingMaskImageType
typedef MovingMaskSpatialObjectType::Pointer	MovingMaskSpatialObjectPointer
typedef itk::ImageMaskSpatialObject< itkGetStaticConstMacro(MovingImageDimension) >	MovingMaskSpatialObjectType

Protected Member Functions
virtual void	GetAndSetComponents (void)
virtual void	GetAndSetFixedImageInterpolators (void)
virtual void	GetAndSetFixedImageRegions (void)
	MultiResolutionRegistrationWithFeatures ()
void	UpdateFixedMasks (unsigned int level)
void	UpdateMovingMasks (unsigned int level)
	~MultiResolutionRegistrationWithFeatures () override
Protected Member Functions inherited from itk::MultiResolutionImageRegistrationMethodWithFeatures< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
void	CheckPyramids (void) override
	MultiResolutionImageRegistrationMethodWithFeatures ()
	~MultiResolutionImageRegistrationMethodWithFeatures () override
Protected Member Functions inherited from itk::MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
virtual void	CheckOnInitialize (void)
virtual void	CheckPyramids (void)
void	GenerateData () override
void	Initialize () override
	MultiInputMultiResolutionImageRegistrationMethodBase ()
void	PreparePyramids (void) override
void	PrintSelf (std::ostream &os, Indent indent) const override
	~MultiInputMultiResolutionImageRegistrationMethodBase () override
Protected Member Functions inherited from itk::MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
void	GenerateData (void) override
virtual void	Initialize ()
	MultiResolutionImageRegistrationMethod2 ()
virtual void	PreparePyramids (void)
void	PrintSelf (std::ostream &os, Indent indent) const override
virtual void	SetCurrentLevel (unsigned long _arg)
	~MultiResolutionImageRegistrationMethod2 () override
Protected Member Functions inherited from elastix::RegistrationBase< TElastix >
FixedMaskSpatialObjectPointer	GenerateFixedMaskSpatialObject (const FixedMaskImageType *maskImage, bool useMaskErosion, const FixedImagePyramidType *pyramid, unsigned int level) const
MovingMaskSpatialObjectPointer	GenerateMovingMaskSpatialObject (const MovingMaskImageType *maskImage, bool useMaskErosion, const MovingImagePyramidType *pyramid, unsigned int level) const
	RegistrationBase ()
	~RegistrationBase () override
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Member Functions
	MultiResolutionRegistrationWithFeatures (const Self &)
void	operator= (const Self &)

Additional Inherited Members
Protected Attributes inherited from itk::MultiInputMultiResolutionImageRegistrationMethodBase< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
FixedImageInterpolatorVectorType	m_FixedImageInterpolators
FixedImagePyramidVectorType	m_FixedImagePyramids
FixedImageRegionPyramidVectorType	m_FixedImageRegionPyramids
FixedImageRegionVectorType	m_FixedImageRegions
FixedImageVectorType	m_FixedImages
InterpolatorVectorType	m_Interpolators
MovingImagePyramidVectorType	m_MovingImagePyramids
MovingImageVectorType	m_MovingImages
FixedImageRegionType	m_NullFixedImageRegion
Protected Attributes inherited from itk::MultiResolutionImageRegistrationMethod2< RegistrationBase< TElastix >::FixedImageType, RegistrationBase< TElastix >::MovingImageType >
ParametersType	m_LastTransformParameters
bool	m_Stop
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
ConfigurationPointer	m_Configuration {}
ElastixPointer	m_Elastix {}
RegistrationPointer	m_Registration {}

Member Typedef Documentation

ConfigurationPointer

template<class TElastix >

typedef Superclass2::ConfigurationPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ConfigurationPointer

Definition at line 134 of file elxMultiResolutionRegistrationWithFeatures.h.

ConfigurationType

template<class TElastix >

typedef Superclass2::ConfigurationType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ConfigurationType

Definition at line 133 of file elxMultiResolutionRegistrationWithFeatures.h.

ConstPointer

template<class TElastix >

typedef itk::SmartPointer< const Self > elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ConstPointer

Definition at line 71 of file elxMultiResolutionRegistrationWithFeatures.h.

ElastixPointer

template<class TElastix >

typedef Superclass2::ElastixPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ElastixPointer

Definition at line 132 of file elxMultiResolutionRegistrationWithFeatures.h.

ElastixType

template<class TElastix >

typedef Superclass2::ElastixType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ElastixType

The CombinationMetric type, which is used internally by the Superclass1 Typedef's from Elastix.

Definition at line 131 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedImageConstPointer

template<class TElastix >

typedef Superclass1::FixedImageConstPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedImageConstPointer

Definition at line 90 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedImagePyramidPointer

template<class TElastix >

typedef Superclass1::FixedImagePyramidPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedImagePyramidPointer

Definition at line 115 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedImagePyramidType

template<class TElastix >

typedef Superclass1::FixedImagePyramidType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedImagePyramidType

Type of the Fixed image multiresolution pyramid.

Definition at line 114 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedImageRegionType

template<class TElastix >

typedef Superclass1::FixedImageRegionType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedImageRegionType

Definition at line 91 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedImageType

template<class TElastix >

typedef Superclass1::FixedImageType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedImageType

Typedef's inherited from Superclass1. Type of the Fixed image.

Definition at line 89 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedMaskImagePointer

template<class TElastix >

typedef Superclass2::FixedMaskImagePointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedMaskImagePointer

protected

Definition at line 172 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedMaskImageType

template<class TElastix >

typedef Superclass2::FixedMaskImageType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedMaskImageType

protected

Definition at line 170 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedMaskSpatialObjectPointer

template<class TElastix >

typedef Superclass2::FixedMaskSpatialObjectPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedMaskSpatialObjectPointer

protected

Definition at line 176 of file elxMultiResolutionRegistrationWithFeatures.h.

FixedMaskSpatialObjectType

template<class TElastix >

typedef Superclass2::FixedMaskSpatialObjectType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::FixedMaskSpatialObjectType

protected

Definition at line 174 of file elxMultiResolutionRegistrationWithFeatures.h.

InterpolatorPointer

template<class TElastix >

typedef Superclass1::InterpolatorPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::InterpolatorPointer

Definition at line 107 of file elxMultiResolutionRegistrationWithFeatures.h.

InterpolatorType

template<class TElastix >

typedef Superclass1::InterpolatorType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::InterpolatorType

Type of the Interpolator.

Definition at line 106 of file elxMultiResolutionRegistrationWithFeatures.h.

ITKBaseType

template<class TElastix >

typedef Superclass2::ITKBaseType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ITKBaseType

Definition at line 137 of file elxMultiResolutionRegistrationWithFeatures.h.

MaskPixelType

template<class TElastix >

typedef Superclass2::MaskPixelType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MaskPixelType

protected

Typedef's for mask support.

Definition at line 169 of file elxMultiResolutionRegistrationWithFeatures.h.

MetricPointer

template<class TElastix >

typedef Superclass1::MetricPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MetricPointer

Definition at line 99 of file elxMultiResolutionRegistrationWithFeatures.h.

MetricType

template<class TElastix >

typedef Superclass1::MetricType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MetricType

Type of the metric.

Definition at line 98 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingImageConstPointer

template<class TElastix >

typedef Superclass1::MovingImageConstPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingImageConstPointer

Definition at line 95 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingImagePyramidPointer

template<class TElastix >

typedef Superclass1::MovingImagePyramidPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingImagePyramidPointer

Definition at line 119 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingImagePyramidType

template<class TElastix >

typedef Superclass1::MovingImagePyramidType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingImagePyramidType

Type of the moving image multiresolution pyramid.

Definition at line 118 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingImageType

template<class TElastix >

typedef Superclass1::MovingImageType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingImageType

Type of the Moving image.

Definition at line 94 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingMaskImagePointer

template<class TElastix >

typedef Superclass2::MovingMaskImagePointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingMaskImagePointer

protected

Definition at line 173 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingMaskImageType

template<class TElastix >

typedef Superclass2::MovingMaskImageType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingMaskImageType

protected

Definition at line 171 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingMaskSpatialObjectPointer

template<class TElastix >

typedef Superclass2::MovingMaskSpatialObjectPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingMaskSpatialObjectPointer

protected

Definition at line 177 of file elxMultiResolutionRegistrationWithFeatures.h.

MovingMaskSpatialObjectType

template<class TElastix >

typedef Superclass2::MovingMaskSpatialObjectType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MovingMaskSpatialObjectType

protected

Definition at line 175 of file elxMultiResolutionRegistrationWithFeatures.h.

OptimizerPointer

template<class TElastix >

typedef Superclass1::OptimizerPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::OptimizerPointer

Definition at line 111 of file elxMultiResolutionRegistrationWithFeatures.h.

OptimizerType

template<class TElastix >

typedef Superclass1::OptimizerType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::OptimizerType

Type of the optimizer.

Definition at line 110 of file elxMultiResolutionRegistrationWithFeatures.h.

ParametersType

template<class TElastix >

typedef Superclass1::ParametersType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::ParametersType

Type of the Transformation parameters. This is the same type used to represent the search space of the optimization algorithm.

Definition at line 124 of file elxMultiResolutionRegistrationWithFeatures.h.

Pointer

template<class TElastix >

typedef itk::SmartPointer< Self > elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Pointer

Definition at line 70 of file elxMultiResolutionRegistrationWithFeatures.h.

RegistrationPointer

template<class TElastix >

typedef Superclass2::RegistrationPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::RegistrationPointer

Definition at line 136 of file elxMultiResolutionRegistrationWithFeatures.h.

RegistrationType

template<class TElastix >

typedef Superclass2::RegistrationType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::RegistrationType

Definition at line 135 of file elxMultiResolutionRegistrationWithFeatures.h.

Self

template<class TElastix >

typedef MultiResolutionRegistrationWithFeatures elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Self

Standard ITK: Self

Definition at line 64 of file elxMultiResolutionRegistrationWithFeatures.h.

Superclass1

template<class TElastix >

typedef itk::MultiResolutionImageRegistrationMethodWithFeatures< typename RegistrationBase< TElastix >::FixedImageType, typename RegistrationBase< TElastix >::MovingImageType > elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Superclass1

Definition at line 68 of file elxMultiResolutionRegistrationWithFeatures.h.

Superclass2

template<class TElastix >

typedef RegistrationBase< TElastix > elastix::MultiResolutionRegistrationWithFeatures< TElastix >::Superclass2

Definition at line 69 of file elxMultiResolutionRegistrationWithFeatures.h.

TransformPointer

template<class TElastix >

typedef Superclass1::TransformPointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::TransformPointer

Definition at line 103 of file elxMultiResolutionRegistrationWithFeatures.h.

TransformType

template<class TElastix >

typedef Superclass1::TransformType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::TransformType

Type of the Transform .

Definition at line 102 of file elxMultiResolutionRegistrationWithFeatures.h.

UseMaskErosionArrayType

template<class TElastix >

typedef Superclass2::UseMaskErosionArrayType elastix::MultiResolutionRegistrationWithFeatures< TElastix >::UseMaskErosionArrayType

Definition at line 138 of file elxMultiResolutionRegistrationWithFeatures.h.

Constructor & Destructor Documentation

MultiResolutionRegistrationWithFeatures() [1/2]

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MultiResolutionRegistrationWithFeatures ( )

inlineprotected

The constructor.

Definition at line 163 of file elxMultiResolutionRegistrationWithFeatures.h.

~MultiResolutionRegistrationWithFeatures()

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::~MultiResolutionRegistrationWithFeatures ( )

inlineoverrideprotected

The destructor.

Definition at line 166 of file elxMultiResolutionRegistrationWithFeatures.h.

MultiResolutionRegistrationWithFeatures() [2/2]

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::MultiResolutionRegistrationWithFeatures ( const Self &  )

private

The private constructor.

Member Function Documentation

BeforeEachResolution()

template<class TElastix >

void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::BeforeEachResolution ( void  )

overridevirtual

Execute stuff before each resolution:

• Update masks with an erosion.
• Set the metric weights.

Reimplemented from elastix::BaseComponent.

BeforeRegistration()

template<class TElastix >

void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::BeforeRegistration ( void  )

overridevirtual

Execute stuff before the actual registration:

• Connect all components to the registration framework.
• Set the number of resolution levels.
• Set the fixed image regions.
• Add the sub metric columns to the iteration info object.

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::elxClassNameMacro

(

"MultiResolutionRegistrationWithFeatures< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific registration framework.
example: (Registration "MultiResolutionRegistrationWithFeatures")

GetAndSetComponents()

template<class TElastix >

virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetComponents ( void  )

protectedvirtual

Read the components from m_Elastix and set them in the Registration class.

GetAndSetFixedImageInterpolators()

template<class TElastix >

virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetFixedImageInterpolators ( void  )

protectedvirtual

Create and set the fixed image interpolators.

GetAndSetFixedImageRegions()

template<class TElastix >

virtual void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetAndSetFixedImageRegions ( void  )

protectedvirtual

Set the fixed image regions.

GetClassName()

template<class TElastix >

virtual const char * elastix::MultiResolutionRegistrationWithFeatures< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from elastix::RegistrationBase< TElastix >.

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		Superclass2::FixedImageDimension
	)

Get the dimension of the fixed image.

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::MultiResolutionRegistrationWithFeatures< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		Superclass2::MovingImageDimension
	)

Get the dimension of the moving image.

New()

template<class TElastix >

static Pointer elastix::MultiResolutionRegistrationWithFeatures< TElastix >::New ( )

static

Method for creation through the object factory.

operator=()

template<class TElastix >

void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::operator= ( const Self &  )

private

The private copy constructor.

UpdateFixedMasks()

template<class TElastix >

void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::UpdateFixedMasks ( unsigned int  level )

protected

Function to update masks.

UpdateMovingMasks()

template<class TElastix >

void elastix::MultiResolutionRegistrationWithFeatures< TElastix >::UpdateMovingMasks ( unsigned int  level )

protected