elastix::ELASTIX Class Reference

#include <elastixlib.h>

Detailed Description

Definition at line 39 of file elastixlib.h.

Public Types
using	ConstImagePointer = Image::ConstPointer
using	Image = itk::DataObject
using	ImagePointer = Image::Pointer
using	ObjectPointer = elastix::ElastixMain::ObjectPointer
using	ParameterMapListType = std::vector< itk::ParameterFileParser::ParameterMapType >
using	ParameterMapType = itk::ParameterFileParser::ParameterMapType
using	ParameterValuesType = itk::ParameterFileParser::ParameterValuesType

Public Member Functions
	ELASTIX ()
ImagePointer	GetResultImage ()
ConstImagePointer	GetResultImage () const
ParameterMapType	GetTransformParameterMap () const
ParameterMapListType	GetTransformParameterMapList () const
int	RegisterImages (ImagePointer fixedImage, ImagePointer movingImage, const ParameterMapType &parameterMap, const std::string &outputPath, bool performLogging, bool performCout, ImagePointer fixedMask=nullptr, ImagePointer movingMask=nullptr)
int	RegisterImages (ImagePointer fixedImage, ImagePointer movingImage, const std::vector< ParameterMapType > &parameterMaps, const std::string &outputPath, bool performLogging, bool performCout, ImagePointer fixedMask=nullptr, ImagePointer movingMask=nullptr, ObjectPointer transform=nullptr)
virtual	~ELASTIX ()

Private Attributes
ImagePointer	m_ResultImage
ParameterMapListType	m_TransformParametersList

Member Typedef Documentation

ConstImagePointer

using elastix::ELASTIX::ConstImagePointer = Image::ConstPointer

Definition at line 45 of file elastixlib.h.

Image

using elastix::ELASTIX::Image = itk::DataObject

Definition at line 43 of file elastixlib.h.

ImagePointer

using elastix::ELASTIX::ImagePointer = Image::Pointer

Definition at line 44 of file elastixlib.h.

ObjectPointer

using elastix::ELASTIX::ObjectPointer = elastix::ElastixMain::ObjectPointer

Definition at line 53 of file elastixlib.h.

ParameterMapListType

using elastix::ELASTIX::ParameterMapListType = std::vector<itk::ParameterFileParser::ParameterMapType>

Definition at line 50 of file elastixlib.h.

ParameterMapType

using elastix::ELASTIX::ParameterMapType = itk::ParameterFileParser::ParameterMapType

Definition at line 49 of file elastixlib.h.

ParameterValuesType

using elastix::ELASTIX::ParameterValuesType = itk::ParameterFileParser::ParameterValuesType

Definition at line 48 of file elastixlib.h.

Constructor & Destructor Documentation

ELASTIX()

elastix::ELASTIX::ELASTIX

(

)

Constructor and destructor

~ELASTIX()

virtual elastix::ELASTIX::~ELASTIX ( )

virtual

Member Function Documentation

GetResultImage() [1/2]

ImagePointer elastix::ELASTIX::GetResultImage

(

)

Getter for result image. Non-const overload

GetResultImage() [2/2]

ConstImagePointer elastix::ELASTIX::GetResultImage

(

)

const

Getter for result image.

GetTransformParameterMap()

ParameterMapType elastix::ELASTIX::GetTransformParameterMap

(

)

const

Get transform parameters of last registration step.

GetTransformParameterMapList()

ParameterMapListType elastix::ELASTIX::GetTransformParameterMapList

(

)

const

Get transform parameters of all registration steps.

RegisterImages() [1/2]

int elastix::ELASTIX::RegisterImages	(	ImagePointer	fixedImage,
		ImagePointer	movingImage,
		const ParameterMapType &	parameterMap,
		const std::string &	outputPath,
		bool	performLogging,
		bool	performCout,
		ImagePointer	fixedMask = nullptr,
		ImagePointer	movingMask = nullptr
	)

The image registration interface functionality Note:

• itk::Image::PixelType must be the same as specified in ParameterMap ('Fixed/MovingInternalImagePixelType')
• Direction cosines are taken from fixed image (always set UseDirectionCosines TRUE) Params: fixedImage itk::Image note type should be the same as specified in the Parameterfile FixedInternalImagePixelType and dimensions! movingImage itk::Image note type should be the same as specified in the Parameterfile MovingInternalImagePixelType and dimensions! ParameterMap outputPath performLogging boolean indicating wether logging should be performed. NOTE: in case of logging also give a valid outputPath! performCout boolean indicating wether output should be send to command window fixedMask default no Mask present movingMask default no Mask present return value: 0 is success in case not 0 an error occurred 0 = success 1 = error -2 = output folder does not exist

  Todo:

  generate file elastix_errors.h containing error codedefines (e.g. #define ELASTIX_NO_ERROR 0)

RegisterImages() [2/2]

int elastix::ELASTIX::RegisterImages	(	ImagePointer	fixedImage,
		ImagePointer	movingImage,
		const std::vector< ParameterMapType > &	parameterMaps,
		const std::string &	outputPath,
		bool	performLogging,
		bool	performCout,
		ImagePointer	fixedMask = nullptr,
		ImagePointer	movingMask = nullptr,
		ObjectPointer	transform = nullptr
	)

Field Documentation

m_ResultImage

ImagePointer elastix::ELASTIX::m_ResultImage

private

Definition at line 125 of file elastixlib.h.

m_TransformParametersList

ParameterMapListType elastix::ELASTIX::m_TransformParametersList

private

Definition at line 128 of file elastixlib.h.