elastix::DistancePreservingRigidityPenalty< TElastix > Class Template Reference

#include <elxDistancePreservingRigidityPenaltyTerm.h>

Detailed Description

template<class TElastix>
class elastix::DistancePreservingRigidityPenalty< TElastix >

A penalty term designed to preserve inter-voxel distances within rigid body regions.

For more information check the paper:
J. Kim, M. M. Matuszak, K. Saitou, and J. Balter, "Distance-preserving rigidity penalty on deformable image registration of multiple skeletal components in the neck" Medical Physics, vol. 40, no. 12, pp. 121907-1 - 121907-10, December 2013.

• view online: http://www.ncbi.nlm.nih.gov/pubmed/24320518

The parameters used in this class are:

Parameters:

Metric: Select this metric as follows:
(Metric "DistancePreservingRigidityPenalty")

Parameters:

SegmentedImageName: The file name of the image to specify the rigidity index of voxels in the fixed image. The image has only non-integer values as follows: 1) background: 0, 2) rigid region1: 1, 3) rigid region2: 2, and so on.

• example: (SegmentedImageName "BoneSegmentation.mhd")
  

Parameters:

PenaltyGridSpacingInVoxels: defines the grid spacing with which the rigidity penalty is calculated. In this current version, the grid spacing is set to be constant over different resolutions.

• In the publication above, the grid spacing was set as [4, 4, 1].

Author

Jihun Kim, University of Michigan, Ann Arbor

Martha M. Matuszak, University of Michigan, Ann Arbor

Kazuhiro Saitou, University of Michigan, Ann Arbor

James Balter, University of Michigan, Ann Arbor

Definition at line 64 of file elxDistancePreservingRigidityPenaltyTerm.h.

Inheritance diagram for elastix::DistancePreservingRigidityPenalty< TElastix >:

Public Types
using	CoefficientImageType = typename BSplineTransformType::ImageType
using	ConstPointer = itk::SmartPointer< const Self >
using	ITKBaseType = typename Superclass2::ITKBaseType
using	Pointer = itk::SmartPointer< Self >
using	SegmentedImagePyramidPointer = typename SegmentedImagePyramidType::Pointer
using	SegmentedImagePyramidType = itk::MultiResolutionPyramidImageFilter< SegmentedImageType, SegmentedImageType >
using	SegmentedImageType = Image< signed short, Self::MovingImageDimension >
using	Self = DistancePreservingRigidityPenalty
using	Superclass1 = itk::DistancePreservingRigidityPenaltyTerm< typename MetricBase< TElastix >::FixedImageType, double >
using	Superclass2 = MetricBase< TElastix >
Public Types inherited from itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
using	BSplineKnotImagePointer = typename BSplineKnotImageType::Pointer
using	BSplineKnotImageRegionType = typename BSplineKnotImageType::RegionType
using	BSplineKnotImageType = Image< signed short, Self::MovingImageDimension >
using	BSplineTransformPointer = typename BSplineTransformType::Pointer
using	BSplineTransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >
using	CoefficientImagePointer = typename CoefficientImageType::Pointer
using	CoefficientImageSpacingType = typename CoefficientImageType::SpacingType
using	CoefficientImageType = typename BSplineTransformType::ImageType
using	CombinationTransformType = AdvancedCombinationTransform< ScalarType, FixedImageDimension >
using	ConstPointer = SmartPointer< const Self >
using	GridSpacingType = typename BSplineTransformType::SpacingType
using	PenaltyGridImagePointer = typename PenaltyGridImageType::Pointer
using	PenaltyGridImageRegionType = typename PenaltyGridImageType::RegionType
using	PenaltyGridImageType = Image< signed short, Self::MovingImageDimension >
using	Pointer = SmartPointer< Self >
using	SegmentedImagePointer = typename SegmentedImageType::Pointer
using	SegmentedImageRegionType = typename SegmentedImageType::RegionType
using	SegmentedImageType = Image< signed short, Self::MovingImageDimension >
using	Self = DistancePreservingRigidityPenaltyTerm
using	Superclass = TransformPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
Public Types inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
using	ConstPointer = SmartPointer< const Self >
using	InternalMatrixType = typename TransformType::InternalMatrixType
using	JacobianOfSpatialHessianType = typename TransformType::JacobianOfSpatialHessianType
using	JacobianOfSpatialJacobianType = typename TransformType::JacobianOfSpatialJacobianType
using	Pointer = SmartPointer< Self >
using	ScalarType = TScalarType
using	Self = TransformPenaltyTerm
using	SpatialHessianType = typename TransformType::SpatialHessianType
using	SpatialJacobianType = typename TransformType::SpatialJacobianType
using	Superclass = AdvancedImageToImageMetric< TFixedImage, TFixedImage >
using	TransformType = typename Superclass::AdvancedTransformType
Public Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
using	AdvancedTransformType = AdvancedTransform< ScalarType, FixedImageDimension, MovingImageDimension >
using	BSplineOrder1TransformPointer = typename BSplineOrder1TransformType::Pointer
using	BSplineOrder1TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 1 >
using	BSplineOrder2TransformPointer = typename BSplineOrder2TransformType::Pointer
using	BSplineOrder2TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 2 >
using	BSplineOrder3TransformPointer = typename BSplineOrder3TransformType::Pointer
using	BSplineOrder3TransformType = AdvancedBSplineDeformableTransform< ScalarType, FixedImageDimension, 3 >
using	CombinationTransformType = AdvancedCombinationTransform< ScalarType, FixedImageDimension >
using	ConstPointer = SmartPointer< const Self >
using	DerivativeValueType = typename DerivativeType::ValueType
using	FixedImageLimiterOutputType = typename FixedImageLimiterType::OutputType
using	FixedImageLimiterPointer = typename FixedImageLimiterType::Pointer
using	FixedImageLimiterType = LimiterFunctionBase< RealType, FixedImageDimension >
using	FixedImageMaskConstPointer = SmartPointer< const FixedImageMaskType >
using	FixedImageMaskPointer = SmartPointer< FixedImageMaskType >
using	FixedImageMaskType = ImageMaskSpatialObject< Self::FixedImageDimension >
using	FixedImagePixelType = typename FixedImageType::PixelType
using	FixedImagePointer = typename FixedImageType::Pointer
using	ImageSampleContainerPointer = typename ImageSamplerType::OutputVectorContainerPointer
using	ImageSampleContainerType = typename ImageSamplerType::OutputVectorContainerType
using	ImageSamplerPointer = typename ImageSamplerType::Pointer
using	ImageSamplerType = ImageSamplerBase< FixedImageType >
using	MovingImageDerivativeScalesType = FixedArray< double, Self::MovingImageDimension >
using	MovingImageLimiterOutputType = typename MovingImageLimiterType::OutputType
using	MovingImageLimiterPointer = typename MovingImageLimiterType::Pointer
using	MovingImageLimiterType = LimiterFunctionBase< RealType, MovingImageDimension >
using	MovingImageMaskConstPointer = SmartPointer< const MovingImageMaskType >
using	MovingImageMaskPointer = SmartPointer< MovingImageMaskType >
using	MovingImageMaskType = ImageMaskSpatialObject< Self::MovingImageDimension >
using	MovingImagePointer = typename MovingImageType::Pointer
using	MovingImageRegionType = typename MovingImageType::RegionType
using	NumberOfParametersType = typename AdvancedTransformType::NumberOfParametersType
using	Pointer = SmartPointer< Self >
using	ScalarType = typename TransformType::ScalarType
using	Self = AdvancedImageToImageMetric
using	Superclass = ImageToImageMetric< TFixedImage, TFixedImage >
using	ThreadInfoType = MultiThreaderBase::WorkUnitInfo
Public Types inherited from elastix::MetricBase< TElastix >
using	AdvancedMetricType = itk::AdvancedImageToImageMetric< FixedImageType, MovingImageType >
using	CoordinateRepresentationType = typename ITKBaseType::ParametersValueType
using	ElastixType = TElastix
using	FixedImageType = typename ElastixType::FixedImageType
using	FixedPointSetType = itk::PointSet< CoordinateRepresentationType, FixedImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, FixedImageDimension, FixedImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >
using	FixedPointType = typename FixedImageType::PointType
using	FixedPointValueType = typename FixedPointType::ValueType
using	ImageSamplerBaseType = typename AdvancedMetricType::ImageSamplerType
using	ITKBaseType = itk::SingleValuedCostFunction
using	MeasureType = typename ITKBaseType::MeasureType
using	MovingImageDerivativeScalesType = typename AdvancedMetricType::MovingImageDerivativeScalesType
using	MovingImageType = typename ElastixType::MovingImageType
using	MovingPointSetType = itk::PointSet< CoordinateRepresentationType, MovingImageDimension, itk::DefaultStaticMeshTraits< CoordinateRepresentationType, MovingImageDimension, MovingImageDimension, CoordinateRepresentationType, CoordinateRepresentationType, CoordinateRepresentationType > >
using	MovingPointType = typename MovingImageType::PointType
using	MovingPointValueType = typename MovingPointType::ValueType
using	RegistrationType = typename ElastixType::RegistrationBaseType
using	Self = MetricBase
using	Superclass = BaseComponentSE< TElastix >
Public Types inherited from elastix::BaseComponentSE< TElastix >
using	ElastixType = TElastix
using	RegistrationType = typename ElastixType::RegistrationBaseType
using	Self = BaseComponentSE
using	Superclass = BaseComponent

Public Member Functions
void	BeforeRegistration () override
	elxClassNameMacro ("DistancePreservingRigidityPenalty")
virtual const char *	GetClassName () const
void	Initialize () override
	ITK_DISALLOW_COPY_AND_MOVE (DistancePreservingRigidityPenalty)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
Public Member Functions inherited from itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
void	GetDerivative (const ParametersType &parameters, DerivativeType &derivative) const override
virtual unsigned int	GetNumberOfRigidGrids () const
MeasureType	GetValue (const ParametersType &parameters) const override
void	GetValueAndDerivative (const ParametersType &parameters, MeasureType &value, DerivativeType &derivative) const override
void	Initialize () override
	ITK_DISALLOW_COPY_AND_MOVE (DistancePreservingRigidityPenaltyTerm)
	itkGetModifiableObjectMacro (SampledSegmentedImage, SegmentedImageType)
	itkGetModifiableObjectMacro (SegmentedImage, SegmentedImageType)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (ImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, FixedImageType::ImageDimension)
virtual void	SetBSplineTransform (BSplineTransformType *_arg)
virtual void	SetSampledSegmentedImage (SegmentedImageType *_arg)
virtual void	SetSegmentedImage (SegmentedImageType *_arg)
Public Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
	ITK_DISALLOW_COPY_AND_MOVE (TransformPenaltyTerm)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
Public Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
virtual void	BeforeThreadedGetValueAndDerivative (const TransformParametersType &parameters) const
virtual const FixedImageLimiterType *	GetFixedImageLimiter ()
const FixedImageMaskType *	GetFixedImageMask () const override
virtual double	GetFixedLimitRangeRatio () const
ImageSamplerType *	GetImageSampler () const
virtual const MovingImageDerivativeScalesType &	GetMovingImageDerivativeScales ()
virtual const MovingImageLimiterType *	GetMovingImageLimiter ()
const MovingImageMaskType *	GetMovingImageMask () const override
virtual double	GetMovingLimitRangeRatio () const
virtual double	GetRequiredRatioOfValidSamples () const
virtual bool	GetScaleGradientWithRespectToMovingImageOrientation () const
const AdvancedTransformType *	GetTransform () const override
AdvancedTransformType *	GetTransform () override
virtual bool	GetUseFixedImageLimiter () const
virtual bool	GetUseImageSampler () const
virtual const bool &	GetUseMetricSingleThreaded ()
virtual bool	GetUseMovingImageDerivativeScales () const
virtual bool	GetUseMovingImageLimiter () const
virtual const bool &	GetUseMultiThread ()
void	Initialize () override
	ITK_DISALLOW_COPY_AND_MOVE (AdvancedImageToImageMetric)
	itkStaticConstMacro (FixedImageDimension, unsigned int, TFixedImage::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, TMovingImage::ImageDimension)
virtual void	SetFixedImageLimiter (FixedImageLimiterType *_arg)
virtual void	SetFixedImageMask (const FixedImageMaskType *const arg)
virtual void	SetFixedLimitRangeRatio (double _arg)
virtual void	SetImageSampler (ImageSamplerType *_arg)
virtual void	SetMovingImageDerivativeScales (MovingImageDerivativeScalesType _arg)
virtual void	SetMovingImageLimiter (MovingImageLimiterType *_arg)
virtual void	SetMovingImageMask (const MovingImageMaskType *const arg)
virtual void	SetMovingLimitRangeRatio (double _arg)
virtual void	SetRequiredRatioOfValidSamples (double _arg)
virtual void	SetScaleGradientWithRespectToMovingImageOrientation (bool _arg)
virtual void	SetTransform (AdvancedTransformType *arg)
virtual void	SetUseMetricSingleThreaded (bool _arg)
virtual void	SetUseMovingImageDerivativeScales (bool _arg)
virtual void	SetUseMultiThread (bool _arg)
virtual void	UseMetricSingleThreadedOff ()
virtual void	UseMetricSingleThreadedOn ()
virtual void	UseMultiThreadOff ()
virtual void	UseMultiThreadOn ()
Public Member Functions inherited from elastix::MetricBase< TElastix >
void	AfterEachIterationBase () override
void	BeforeEachResolutionBase () override
virtual ImageSamplerBaseType *	GetAdvancedMetricImageSampler () const
virtual bool	GetAdvancedMetricUseImageSampler () const
ITKBaseType *	GetAsITKBaseType ()
const ITKBaseType *	GetAsITKBaseType () const
virtual MeasureType	GetCurrentExactMetricValue () const
virtual bool	GetShowExactMetricValue () const
	ITK_DISALLOW_COPY_AND_MOVE (MetricBase)
	itkStaticConstMacro (FixedImageDimension, unsigned int, FixedImageType::ImageDimension)
	itkStaticConstMacro (MovingImageDimension, unsigned int, MovingImageType::ImageDimension)
virtual void	SelectNewSamples ()
virtual void	SetAdvancedMetricImageSampler (ImageSamplerBaseType *sampler)
Public Member Functions inherited from elastix::BaseComponentSE< TElastix >
void	AddTargetCellToIterationInfo (const char *const name)
const Configuration *	GetConfiguration () const
ElastixType *	GetElastix () const
auto &	GetIterationInfoAt (const char *const name)
RegistrationType *	GetRegistration () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponentSE)
void	RemoveTargetCellFromIterationInfo (const char *const name)
void	SetConfiguration (const Configuration *_arg)
void	SetElastix (ElastixType *_arg)
Public Member Functions inherited from elastix::BaseComponent
virtual void	AfterEachIteration ()
virtual void	AfterEachResolution ()
virtual void	AfterEachResolutionBase ()
virtual void	AfterRegistration ()
virtual void	AfterRegistrationBase ()
virtual int	BeforeAll ()
virtual int	BeforeAllBase ()
virtual void	BeforeEachResolution ()
virtual void	BeforeRegistrationBase ()
virtual const char *	elxGetClassName () const
const char *	GetComponentLabel () const
	ITK_DISALLOW_COPY_AND_MOVE (BaseComponent)
	itkTypeMacroNoParent (BaseComponent)
void	SetComponentLabel (const char *label, unsigned int idx)

Static Public Member Functions
static Pointer	New ()
Static Public Member Functions inherited from itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
static Pointer	New ()
Static Public Member Functions inherited from elastix::BaseComponent
template<typename TBaseComponent >
static auto	AsITKBaseType (TBaseComponent *const baseComponent) -> decltype(baseComponent->GetAsITKBaseType())
static void	InitializeElastixExecutable ()
static bool	IsElastixLibrary ()

Protected Member Functions
	DistancePreservingRigidityPenalty ()=default
	~DistancePreservingRigidityPenalty () override=default
Protected Member Functions inherited from itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >
	DistancePreservingRigidityPenaltyTerm ()
void	PrintSelf (std::ostream &os, Indent indent) const override
	~DistancePreservingRigidityPenaltyTerm () override=default
Protected Member Functions inherited from itk::TransformPenaltyTerm< TFixedImage, TScalarType >
virtual bool	CheckForBSplineTransform2 (BSplineOrder3TransformPointer &bspline) const
	TransformPenaltyTerm ()=default
	~TransformPenaltyTerm () override=default
Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
	AdvancedImageToImageMetric ()
virtual void	AfterThreadedGetValue (MeasureType &) const
virtual void	AfterThreadedGetValueAndDerivative (MeasureType &, DerivativeType &) const
void	CheckForAdvancedTransform ()
void	CheckForBSplineInterpolator ()
void	CheckForBSplineTransform () const
void	CheckNumberOfSamples (unsigned long wanted, unsigned long found) const
virtual bool	EvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient) const
bool	EvaluateTransformJacobian (const FixedImagePointType &fixedImagePoint, TransformJacobianType &jacobian, NonZeroJacobianIndicesType &nzji) const
virtual void	EvaluateTransformJacobianInnerProduct (const TransformJacobianType &jacobian, const MovingImageDerivativeType &movingImageDerivative, DerivativeType &imageJacobian) const
bool	FastEvaluateMovingImageValueAndDerivative (const MovingImagePointType &mappedPoint, RealType &movingImageValue, MovingImageDerivativeType *gradient, const ThreadIdType threadId) const
virtual void	InitializeImageSampler ()
void	InitializeLimiters ()
virtual void	InitializeThreadingParameters () const
virtual bool	IsInsideMovingMask (const MovingImagePointType &point) const
	itkAlignedTypedef (ITK_CACHE_LINE_ALIGNMENT, PaddedGetValueAndDerivativePerThreadStruct, AlignedGetValueAndDerivativePerThreadStruct)
	itkPadStruct (ITK_CACHE_LINE_ALIGNMENT, GetValueAndDerivativePerThreadStruct, PaddedGetValueAndDerivativePerThreadStruct)
void	LaunchGetValueAndDerivativeThreaderCallback () const
void	LaunchGetValueThreaderCallback () const
void	PrintSelf (std::ostream &os, Indent indent) const override
void	SetFixedImageMask (const typename Superclass::FixedImageMaskType *) final
void	SetFixedImageMask (typename Superclass::FixedImageMaskType *) final
void	SetMovingImageMask (const typename Superclass::MovingImageMaskType *) final
void	SetMovingImageMask (typename Superclass::MovingImageMaskType *) final
virtual void	SetUseFixedImageLimiter (bool _arg)
virtual void	SetUseImageSampler (bool _arg)
virtual void	SetUseMovingImageLimiter (bool _arg)
virtual void	ThreadedGetValue (ThreadIdType) const
virtual void	ThreadedGetValueAndDerivative (ThreadIdType) const
MovingImagePointType	TransformPoint (const FixedImagePointType &fixedImagePoint) const
	~AdvancedImageToImageMetric () override=default
Protected Member Functions inherited from elastix::MetricBase< TElastix >
virtual MeasureType	GetExactValue (const ParametersType &parameters)
	MetricBase ()=default
	~MetricBase () override=default
Protected Member Functions inherited from elastix::BaseComponentSE< TElastix >
	BaseComponentSE ()=default
	~BaseComponentSE () override=default
Protected Member Functions inherited from elastix::BaseComponent
	BaseComponent ()=default
virtual	~BaseComponent ()=default

Private Attributes
	elxOverrideGetSelfMacro

Additional Inherited Members
Protected Types inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
using	BSplineInterpolatorFloatPointer = typename BSplineInterpolatorFloatType::Pointer
using	BSplineInterpolatorFloatType = BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, float >
using	BSplineInterpolatorPointer = typename BSplineInterpolatorType::Pointer
using	BSplineInterpolatorType = BSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >
using	FixedImageIndexType = typename FixedImageType::IndexType
using	FixedImageIndexValueType = typename FixedImageIndexType::IndexValueType
using	FixedImagePointType = typename TransformType::InputPointType
using	LinearInterpolatorPointer = typename LinearInterpolatorType::Pointer
using	LinearInterpolatorType = AdvancedLinearInterpolateImageFunction< MovingImageType, CoordinateRepresentationType >
using	MovingImageContinuousIndexType = typename InterpolatorType::ContinuousIndexType
using	MovingImageDerivativeType = typename BSplineInterpolatorType::CovariantVectorType
using	MovingImageIndexType = typename MovingImageType::IndexType
using	MovingImagePointType = typename TransformType::OutputPointType
using	NonZeroJacobianIndicesType = typename AdvancedTransformType::NonZeroJacobianIndicesType
using	ReducedBSplineInterpolatorPointer = typename ReducedBSplineInterpolatorType::Pointer
using	ReducedBSplineInterpolatorType = ReducedDimensionBSplineInterpolateImageFunction< MovingImageType, CoordinateRepresentationType, double >
Protected Types inherited from elastix::MetricBase< TElastix >
using	ExactMetricImageSamplerPointer = typename ExactMetricImageSamplerType::Pointer
using	ExactMetricImageSamplerType = itk::ImageGridSampler< FixedImageType >
using	ExactMetricSampleGridSpacingType = typename ExactMetricImageSamplerType::SampleGridSpacingType
using	ParametersType = typename ITKBaseType::ParametersType
Static Protected Member Functions inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	AccumulateDerivativesThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueAndDerivativeThreaderCallback (void *arg)
static ITK_THREAD_RETURN_FUNCTION_CALL_CONVENTION	GetValueThreaderCallback (void *arg)
Protected Attributes inherited from itk::AdvancedImageToImageMetric< TFixedImage, TFixedImage >
AdvancedTransformType::Pointer	m_AdvancedTransform
FixedImageLimiterOutputType	m_FixedImageMaxLimit
FixedImageLimiterOutputType	m_FixedImageMinLimit
FixedImagePixelType	m_FixedImageTrueMax
FixedImagePixelType	m_FixedImageTrueMin
double	m_FixedLimitRangeRatio
std::unique_ptr< AlignedGetValueAndDerivativePerThreadStruct[]>	m_GetValueAndDerivativePerThreadVariables
ThreadIdType	m_GetValueAndDerivativePerThreadVariablesSize
ImageSamplerPointer	m_ImageSampler
MovingImageLimiterOutputType	m_MovingImageMaxLimit
MovingImageLimiterOutputType	m_MovingImageMinLimit
MovingImagePixelType	m_MovingImageTrueMax
MovingImagePixelType	m_MovingImageTrueMin
double	m_MovingLimitRangeRatio
MultiThreaderParameterType	m_ThreaderMetricParameters
bool	m_TransformIsBSpline
bool	m_UseMetricSingleThreaded
bool	m_UseMultiThread
Protected Attributes inherited from elastix::MetricBase< TElastix >
MeasureType	m_CurrentExactMetricValue { 0.0 }
unsigned int	m_ExactMetricEachXNumberOfIterations { 1 }
ExactMetricSampleGridSpacingType	m_ExactMetricSampleGridSpacing
ExactMetricImageSamplerPointer	m_ExactMetricSampler { nullptr }
bool	m_ShowExactMetricValue { false }
Protected Attributes inherited from elastix::BaseComponentSE< TElastix >
Configuration::ConstPointer	m_Configuration {}
itk::WeakPointer< TElastix >	m_Elastix {}
RegistrationType *	m_Registration {}

Member Typedef Documentation

CoefficientImageType

template<class TElastix >

using itk::DistancePreservingRigidityPenaltyTerm< TFixedImage, TScalarType >::CoefficientImageType = typename BSplineTransformType::ImageType

Definition at line 148 of file itkDistancePreservingRigidityPenaltyTerm.h.

ConstPointer

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::ConstPointer = itk::SmartPointer<const Self>

Definition at line 76 of file elxDistancePreservingRigidityPenaltyTerm.h.

ITKBaseType

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::ITKBaseType = typename Superclass2::ITKBaseType

Definition at line 139 of file elxDistancePreservingRigidityPenaltyTerm.h.

Pointer

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::Pointer = itk::SmartPointer<Self>

Definition at line 75 of file elxDistancePreservingRigidityPenaltyTerm.h.

SegmentedImagePyramidPointer

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::SegmentedImagePyramidPointer = typename SegmentedImagePyramidType::Pointer

Definition at line 143 of file elxDistancePreservingRigidityPenaltyTerm.h.

SegmentedImagePyramidType

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::SegmentedImagePyramidType = itk::MultiResolutionPyramidImageFilter<SegmentedImageType, SegmentedImageType>

Typedef for multi-resolution pyramid of segmented image

Definition at line 142 of file elxDistancePreservingRigidityPenaltyTerm.h.

SegmentedImageType

template<class TElastix >

using itk::DistancePreservingRigidityPenaltyTerm< TFixedImage, TScalarType >::SegmentedImageType = Image<signed short, Self::MovingImageDimension>

Define the segmented image.

Definition at line 183 of file itkDistancePreservingRigidityPenaltyTerm.h.

Self

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::Self = DistancePreservingRigidityPenalty

Standard ITK-stuff.

Definition at line 72 of file elxDistancePreservingRigidityPenaltyTerm.h.

Superclass1

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::Superclass1 = itk::DistancePreservingRigidityPenaltyTerm<typename MetricBase<TElastix>::FixedImageType, double>

Definition at line 73 of file elxDistancePreservingRigidityPenaltyTerm.h.

Superclass2

template<class TElastix >

using elastix::DistancePreservingRigidityPenalty< TElastix >::Superclass2 = MetricBase<TElastix>

Definition at line 74 of file elxDistancePreservingRigidityPenaltyTerm.h.

Constructor & Destructor Documentation

DistancePreservingRigidityPenalty()

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::DistancePreservingRigidityPenalty ( )

protecteddefault

The constructor.

~DistancePreservingRigidityPenalty()

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::~DistancePreservingRigidityPenalty ( )

overrideprotecteddefault

The destructor.

Member Function Documentation

BeforeRegistration()

template<class TElastix >

void elastix::DistancePreservingRigidityPenalty< TElastix >::BeforeRegistration ( )

overridevirtual

Do some things before registration:

• Read the fixed rigidity image.
• Setup some extra target cells.

Reimplemented from elastix::BaseComponent.

elxClassNameMacro()

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::elxClassNameMacro

(

"DistancePreservingRigidityPenalty< TElastix >"

)

Name of this class. Use this name in the parameter file to select this specific metric.
example: (Metric "DistancePreservingRigidityPenalty")

GetClassName()

template<class TElastix >

virtual const char * elastix::DistancePreservingRigidityPenalty< TElastix >::GetClassName ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::DistancePreservingRigidityPenaltyTerm< MetricBase< TElastix >::FixedImageType, double >.

Initialize()

template<class TElastix >

void elastix::DistancePreservingRigidityPenalty< TElastix >::Initialize ( )

override

Sets up a timer to measure the initialization time and calls the Superclass' implementation.

ITK_DISALLOW_COPY_AND_MOVE()

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::ITK_DISALLOW_COPY_AND_MOVE

(

DistancePreservingRigidityPenalty< TElastix >

)

itkStaticConstMacro() [1/2]

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::itkStaticConstMacro	(	FixedImageDimension	,
		unsigned int	,
		FixedImageType::ImageDimension
	)

The fixed image dimension.

itkStaticConstMacro() [2/2]

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::itkStaticConstMacro	(	MovingImageDimension	,
		unsigned int	,
		MovingImageType::ImageDimension
	)

The moving image dimension.

New()

template<class TElastix >

static Pointer elastix::DistancePreservingRigidityPenalty< TElastix >::New ( )

static

Method for creation through the object factory.

Field Documentation

elxOverrideGetSelfMacro

template<class TElastix >

elastix::DistancePreservingRigidityPenalty< TElastix >::elxOverrideGetSelfMacro

private

Definition at line 167 of file elxDistancePreservingRigidityPenaltyTerm.h.