Package main

package main
  • Classes
    Class
    Description
    Main
    Class Main is the entry class for the Beagle program.
    Par
    Class Parameters represents the parameters for a Beagle analysis.
    Pedigree
    Class Pedigree stores parent-offspring relationships in a list of samples.
    RunStats
    Class RunStats contains methods for storing and printing statistics describing a Beagle analysis.
    WindowWriter
    Class WindowWriter writes VCF and IBD output data.