Package blbutil
package blbutil
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ClassDescriptionClass
BGZipIt
is ablbutil.FileIt<String>
whosenext()
method returns lines of a bgzip-compressed file.ClassBGZIPOutputStream
is an output stream filter that performs BGZIP compression.InterfaceBitArray
represents a mutable sequence of bits with a fixed length.ClassBlockLineReader
is ablbutil.FileIt
that reads blocks of lines from a file.ClassConst
provides public static final fields with string and character constants.ClassDoubleArray
represents an immutable list of double floating point values.FileIt<E>An iterator for data elements in a file.ClassFileUtil
contains static methods for working with files.Filter<E>A filter for accepting or rejecting objects.ClassFloatArray
represents an immutable list of float floating point values.ClassFloatList
represents a list of floats.ClassInputIt
is a buffered iterator whosenext()
method returns lines of a text input stream.ClassUtilities
contains miscellaneous static utility methods for multi-threaded programming.SampleFileIt<E>An iterator for records in a file.ClassStringUtil
is a utility class with static methods for counting and returning delimited fields in a string.TriFunction<T,U, V, R> ClassTriFunction
represents a function that accepts three arguments and produces a result.ClassUtilities
contains miscellaneous static utility methods.Class Validate contains static methods for validating command line arguments.VcfFileIt<E>An iterator for records in a VCF file.